Xiphophorus hellerii (green swordtail): 116736611
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Entry
116736611 CDS
T07363
Symbol
nup50
Name
(RefSeq) nuclear pore complex protein Nup50
KO
K14295
nuclear pore complex protein Nup50
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116736611 (nup50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xhe03019
]
116736611 (nup50)
Messenger RNA biogenesis [BR:
xhe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
116736611 (nup50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUP50
Ran_BP1
Motif
Other DBs
NCBI-GeneID:
116736611
NCBI-ProteinID:
XP_032445074
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Position
17:complement(3243901..3249439)
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AA seq
442 aa
AA seq
DB search
MAKRIADKELTDRNWDLEEEGEEAGTFSVASEDVLKSRAIKKAKRRNTGGESEGGGAFKG
FKGFSMATSSTTPSSSLTAFSGFGGTGSFKGFGGLSNGTGSTASFGGFPSAAKAGVAFNG
PSSAQPGTDIVAQQTNGSAPGPSPAPCSRSREYSRQLTALNQSVRDWISKHVNDNPLCDL
NPIFRDYERHLASIERQYGAGAEETQQGDASTPPPPAPSSSSVALFSFSKTSTEDPGQKR
SGSAPLPAGVSFNFGQKVDAPALGSLASKPSVPSFSFSSSSNQSSPFGAAGPSAALSFGG
TKTSDAPAADDKEEESEEPPKPEVKEVKEDDAFYSKKCKLFYKKELEFKEKGVGTLHLKR
TAEGKTQMIIRADTNLGNILLNILVPPTLPCSRVGKNNVMVVCVPNPPVDDKNPSVAVPL
LIRVKTAEDADELHKTLEEKKR
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagaggatcgctgataaggagctgacagacaggaactgggacctggaggaggag
ggagaggaggccgggacgttttctgttgcgagtgaggatgtgttgaagagccgcgccata
aagaaagccaaacgcagaaacactggaggagagagcgaagggggaggagctttcaaaggg
tttaaaggcttctccatggcaacatcctcaaccacaccctccagcagcctcacagcgttc
tccgggttcgggggtaccggcagctttaaaggcttcggaggcctgagcaacggaaccggc
tccacagcttcgtttggaggattcccgtctgctgcaaaggccggtgtggcattcaatggg
ccctcctcagcccagcccggcactgacatcgtggcccagcagaccaatggctccgccccc
ggccctagccccgccccctgcagccgcagcagggagtacagccggcagctgacggcgctc
aaccagtcggtgcgcgactggatcagcaagcatgtgaacgacaacccgctgtgcgacctc
aaccccatcttcagagactacgagcgccacctggccagcatcgagcggcagtacggcgcc
ggcgccgaggagacgcagcagggagacgcctccactccccctcctcctgctccctcctct
tcctcagtggctctgttctccttcagtaaaacctcgacagaagatccgggtcagaaacgc
tccggctcggcgccgctccctgccggcgtctcctttaacttcgggcagaaggtggacgca
cccgccctggggtccttggcatccaaaccatccgtccccagcttctccttctcctcctca
tccaatcagagctccccgttcggagcagctggaccctcggctgcattgtcctttggcggg
accaaaacttcagatgccccagctgcagacgacaaagaagaagaatcggaggagcctccc
aaaccagaggtcaaggaggtcaaagaggacgatgccttctactctaagaagtgtaagtta
ttctacaagaaggagttggagttcaaagagaaaggcgtgggaacgctgcacctcaaacgc
accgcagaggggaagacccagatgatcatcagagccgacaccaacctgggaaacattctg
ctgaacatccttgtgccgcccaccctgccgtgctcgcgggtcgggaagaacaacgtcatg
gtggtctgtgtgccgaacccgcccgtcgacgacaagaacccgagcgtggccgtccccctg
ctgatccgagtgaagaccgcagaggacgccgacgagctccacaagacgctggaggagaag
aaacgctga
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