Xiphophorus hellerii (green swordtail): 116736655
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Entry
116736655 CDS
T07363
Name
(RefSeq) uncharacterized protein LOC116736655
KO
K08127
epiphycan
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
xhe00535
]
116736655
Proteoglycans [BR:
xhe00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class III
116736655
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Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRRNT
LRR_9
LRR_6
Motif
Other DBs
NCBI-GeneID:
116736655
NCBI-ProteinID:
XP_032445157
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Position
17:6813040..6827872
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AA seq
594 aa
AA seq
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MRIFLWLLFGLFVLKVVAASPRFSRQVDFDSYNTVDYDEREDNFEDNYDYGKMTVADPEP
EIEEPDYQVQDYNYPEPEVEAEEKEEEEEEELPLKSQAVPQGSGGSGVLMGPDTEKEVEL
RQATVDTLHVSGDFGGSIGSGETSAASGASGSAVSGDILVSSGSGDFSGDIILISGDPEE
FIITSGSGEFLTGGDLLISGDIPGSGDVTGSAFSGDSLPEDLKMVTELPFETGVSGDQSG
SGFSGDLLSSGASGTSGDSGDSIDSGYSGITLISGEEELLPSVDKIPEEALSASGTPSGD
IDASVDIEASVDSEVSGTSGLPSVSGSGDIEVLVTIRPREPEEEEEPFPTTTESPQEGKT
SIEEDTGLSGFPLPEEPGETEVIDEGLPVCLLCTCLGGSVYCDDLKLNSVPPLPKDTTHF
YARYNRITKISKSDFANMNKLKKIDLTANRITSIEDRTFMGLPELEEVIIRENHISQLPA
LPETMTLIDVSHNNIGSKGIHKEAFKDMTGLLYLYLTDNNVDYIPVPLPDSLRSLHLQRN
NIQMMHEDTFCNLNDFNYIRNALEDIRLDGNPINLSKTPQAYICLPRIPIGNLI
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgaggatctttttgtggctcttgttcggactcttcgtcctcaaagtggtggcggccagt
cccagattttcccggcaggtggactttgactcatacaatacagttgactatgatgaaaga
gaagacaattttgaagataactatgactatgggaaaatgacagttgctgatcctgagcca
gagattgaggagccggattatcaggttcaggattataactatcctgaaccagaagtagaa
gcagaagaaaaggaggaggaagaggaagaagaattgcctctaaaatctcaagctgtccct
cagggttctggtggatctggtgtcctcatgggtccagacacagagaaagaggtggagctg
cgtcaggcaacggtcgatactcttcatgtttccggggattttggaggctctatagggtcc
ggagaaacttcagcagcttccggggcctctgggtctgccgtctcaggagacatcctggtc
tccagtggctccggggatttttctggtgacattattctgatatctggggatccagaagag
ttcattataaccagtggatctggggagttcttgacaggtggggatctcttgatatctggg
gacattccaggatctggagacgtcactgggtctgctttttcgggagactctctccctgaa
gatttgaaaatggtcactgaactcccctttgaaaccggagtatctggggaccagtctggc
tctgggttctctggagatcttttgagctctggggcctctggaacctctggggattctggg
gactctattgattcaggatattcagggataactttgatatctggagaggaggagcttctc
ccttctgtagataaaatcccagaggaggcactgagtgcttctgggacgccctcgggagac
attgacgcctctgtagacattgaagcctctgtagattcagaggtctctggaacctctgga
cttcctagtgtctctgggtcaggagacattgaggtccttgtgacaattcgacccagagaa
ccagaagaagaggaggagccgtttccaactacaactgaatcccctcaggaggggaaaaca
agtatagaagaagatacagggctctctggcttcccattgccagaggagccaggggagacc
gaggttatcgatgaaggattgcctgtttgcttgctgtgcacatgcctcggtggttcggtc
tactgtgacgacttgaagctgaacagtgttccacctctgcccaaagacaccactcacttc
tacgcccgctacaacagaatcacaaagatcagcaagtctgacttcgccaacatgaacaag
ctgaagaagatcgacctgactgctaatagaataacctccattgaggatagaacgtttatg
ggcctgcctgagctggaggaggtgataatcagagaaaatcacatctcacagctgccagcc
cttcccgagaccatgaccctgattgatgtcagccacaacaacattggctcaaagggtatt
cataaagaggcatttaaagacatgactggcctgctgtacctttacctcaccgataacaac
gttgattatattccagtgcctctaccagacagcctacgctcgctacacttacagcgtaac
aacattcagatgatgcacgaggacacgttctgcaacctgaacgacttcaactacatccga
aacgcgttggaggacatccgtctggacggaaaccccatcaacctcagcaagaccccgcag
gcttacatctgcctgccccgtatacccatcgggaatctcatttaa
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