Xiphophorus hellerii (green swordtail): 116736698
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Entry
116736698 CDS
T07363
Symbol
mkrn1
Name
(RefSeq) E3 ubiquitin-protein ligase makorin-1
KO
K15687
E3 ubiquitin-protein ligase makorin [EC:
2.3.2.27
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xhe04121
]
116736698 (mkrn1)
Enzymes [BR:
xhe01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116736698 (mkrn1)
Ubiquitin system [BR:
xhe04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
116736698 (mkrn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MKRN1_C
zf-CCCH_4
Torus
zf_CCCH_4
zf-CCCH
zf-CCCH_DUS3L
zf-CCCH_2
zf-CCCH_3
zf-RING_UBOX
zf-RING_2
zf-C3HC4
zf-CCCH_PARP12
zf-CCCH_9
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
116736698
NCBI-ProteinID:
XP_032445248
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All DBs
Position
17:19493549..19504370
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AA seq
437 aa
AA seq
DB search
MAEAAAASTVAPSVTGGWTKHVTCRYFMHGLCKEGDSCRYSHDLSSSKPAAMICKFFQKG
NCVFGDRCRFEHSKPIKKEELPNTQTLPLASVSQADPADPTDPADPEPRGMSPGSEAQDW
VNAAEFVPGQPYCGRAEPVKVESSAPLIEEFDSDAGPDNKDLRKQLCPYAAVGECRYGVN
CAYLHGDVCDMCGLQVLHPSDSSQRSEHTKACIEAHEKDMEISFAIQRSKDMMCGVCMEV
VFEKSNPSERRFGILSNCSHCYCLKCIRKWRSAKQFESKIIKSCPECRITSNFVIPSEYW
VEDKEDKQKLIQKYKDGMGSKPCRYFDEGRGTCPFGSNCFYKHAFPDGRLEEAQPQRRQT
GSNNRNRSSRRTPLWDIFDERESTDSFDNDDEEMVTFELSEMLLMLLAAGTDDEVTDSED
EWDLFHEELDDFYEIYL
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggcagcagcagcgtctacggtggctccttcagtaacaggaggttggacaaaa
cacgtaacctgcaggtatttcatgcatggtctttgcaaagaaggggacagctgtcgatac
tctcatgatctttcgagcagcaaacctgcagccatgatatgcaagttctttcagaaggga
aactgtgtgtttggagatcgctgcaggtttgagcacagtaaacccataaagaaagaggag
ctgccaaacacccagacgctgccgctggcctctgtctcccaggccgacccggcggaccca
actgacccggctgacccagaacccaggggcatgtcgcctgggtcagaggctcaggactgg
gtcaacgctgcagagtttgttccaggacagccgtactgtggacgagctgagccagtgaaa
gtggagagctcggcccctctcattgaggagtttgacagcgacgcaggcccagacaacaaa
gacctgaggaagcagctctgtccatatgctgctgttggagagtgtcgctacggagtcaac
tgtgcttatctccatggtgacgtgtgtgacatgtgcggcctgcaggttctccaccccagt
gacagttcccagcgctcagagcacaccaaggcgtgcattgaagctcatgagaaagacatg
gagatttcttttgccatccagcgcagtaaggacatgatgtgtggcgtgtgtatggaggtt
gtgttcgagaagtccaacccaagcgaacgtcgttttgggatcctctccaactgcagccac
tgttactgtctgaaatgcattcgcaagtggaggagtgccaagcagttcgagagcaaaatt
atcaagtcctgtccagagtgtcgaatcacatctaactttgtcatcccgagtgagtactgg
gtggaggacaaagaggacaagcagaagctaatccagaaatacaaggatggcatggggagt
aaaccatgtcggtacttcgatgaaggtcgtggaacttgtccttttggctcaaactgcttc
tacaaacacgccttccctgatggacgtctagaggaagctcagccgcagagaagacagact
ggatccaataacaggaaccggagctcgaggcggacgccactgtgggacatctttgacgag
agagaaagcaccgactcgttcgacaacgacgacgaggagatggtgacgttcgagctgagt
gagatgcttctcatgctgcttgctgcaggaaccgacgacgaagtgacggattcagaggac
gaatgggacttgtttcacgaggagctcgacgatttctatgagatttacctatag
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