Xiphophorus hellerii (green swordtail): 116736706
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Entry
116736706 CDS
T07363
Name
(RefSeq) receptor-type tyrosine-protein phosphatase beta-like isoform X1
KO
K05694
receptor-type tyrosine-protein phosphatase beta [EC:
3.1.3.48
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
116736706
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
xhe01009
]
116736706
Enzymes [BR:
xhe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
116736706
Protein phosphatases and associated proteins [BR:
xhe01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
116736706
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Y_phosphatase
Fn3_Dep-1_4th
PTP_tm
FN3_Tor_3rd
Pur_ac_phosph_N
Tc-R-P
PTP-SAK
DSPc
PTPlike_phytase
PTP-NADK
Y_phosphatase3
EKR
Motif
Other DBs
NCBI-GeneID:
116736706
NCBI-ProteinID:
XP_032445280
LinkDB
All DBs
Position
17:3071078..3108674
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AA seq
1966 aa
AA seq
DB search
MLKCKARSFSCCLGFASLLLLLQVVSSAAPTEHPASSAPCSISVSGSASGPNSVSLTLTT
AGLNCSFSVASPDVGTDSSECRTVTERELQGNETERPPGAGVFTCALDHLEPGAAYLLQV
RSQTDDESANVTLHTRPSAVVGLAVTSRTCSSLGLSWQAGPGRTQRFRLQLREKAQISNQ
SDLLKNETLGSTTTRHTLNDLTPGRLYVVTMVTEAGGLQSSRTVEARTAPAAISNVTSEN
NCTSLRLSWQRPEGDVDAMVVTFFDNDTIVQETTEPGNATEVAAYKLTPGSAYQVEVMSV
SGSLTNQSKLTVRTAPAAASHLQLSPSSAGLLLTWAPPAGRWENYRVFLLDGVQQLVDTA
LGRDAVNFSFPGTELTPGRRYRATLRVESGGLAGESSCYGSTAPAPVADLHIRHSDETLL
SAMWNHAPSGSRDDYFLTIRHGDTIVDMRQVEPNMRECTFNVLTPGRRYVITVTTRSGNL
NTSVSVEGRTVPMALRTISLSNSGVDSLQVTWKKPPGDVDSYNLTLLRNSVVVQNHSVPA
GSNSLVLTSLTPGTLYRLQAATISGELQSKPISLEARTAPAAVSKVTVANGGRSDALYVS
WLPADGVVDSYLVQLEDRKRTVHMLPVSSSSPPECSFNSLEAGHLYSVVIVTRSSGLENT
TVVQARTQPATAGNPNAVHAGRDDYLKVYWHHAAGDLDRYVVLISYNHTILQNQSVPTGH
NECAFSSLTPGRLYTVTVETWSGSYVSSISTHGRTLPAAVRNLSVKNAGTSELNVTWSPA
LGDVDHYEVTLLFNDTRVFPPAMLGSDVHHHLLTSLTPGRLYKIMLSTFSGPLQVAQVME
GRTVPSAAKNLRLIPQPGRTDSGAGLLFSWTSGPGDLDLYKVSLSPMDGVSIDIRPVPKH
ISSLDFLDLIPGQAYRVSIQSQSGTLTNSNTASGRAAPAAVTALQADNGHTTHSLTVSWE
RPVGAFDGYRLQLLDEVGGVVRNRSVAEDSQSEQLEGLTSGKRYRVKLVTLSGGVTSLEA
AAAEGQTRPAAVQNLTIVMANTTSLSFSWRPSDGHVDAYDLSLYSVSEATANHRMQHQQT
AGEPVDRKKVGPAADGCVFSGLRAGSLYRLLVVSWSHDLSSDSSVLARTVPAPVSALQVQ
SSGRSDRLTVSWQHGVGSCSSYQVLLYDSSGSAQDAQMLGAEHSSHTFLGLTAGRLYRAD
VITHSGDLTNSVSGFGRTSPEPPSHLSVRPGPTNQSVELLWSGPASGDYDNFSLQWAPDD
PLSVTQTHRSSRIVSGMFPGRQYNFTVTTVSGGGAKSGPTASSQPIQKSVRTSPSPLRSI
HCFPLSSSALSCSWTPPLADFDSYEVECRRHDNGELTSTLRLAGGVTAVTLDHLDAFRKY
VVTVRVSSAGQPSPAATQTAITMIDRPPIPPPGVHVSEKSSKMTSSSILFRFNCSWFSDA
NGAIRYFSVIVAESDANENLQPEQRHPMPSYRDYISNSSVRAYQTSYFPSRCPQDTESAG
GQVVEVNLGAGGERLGGACDHYHDDDLYLGYGGFCDGPLKPKTSYRLSVRAFTKLFDENH
REVAEPLFSDTYLSSPLRTHAEPLGGVVEGLSAGMFLIGMMVAVVSLLAYRQRLRKVAVQ
ENPVVRMSMWKEVPASGMYMGVRSNRRVTSPVKACHFESHLNKLQADSNYLLSEEFEDLK
DVGRNQTMDVARLPENRGKNRYNNILPYDSTRVKLSYLEDDPCSDYVNASYIPGNNYRRE
YIATQGPLPGTKDDFWRMVWEHGVHNVVMVTQCVEKGRVKCDQYWPADKEPLYYGDLVIQ
MLSESVLPEWTIREFKIISENSCSYPRMLRHFHYTVWPDHGVPDSTQSLIQFVRTVRDYV
DRSPSTGATVVHCSAGVGRTGTFIALDRVLQQLDSKGGIDLYGCVFDLRLHRQHMVQTEC
QYAFLHQCVRDVLRARKHRSEQENPLYPIYENFNPEYCRDFIYNGR
NT seq
5901 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaatgtaaagctagaagtttctcctgctgcctggggttcgcctcgctgctgctg
ctgctgcaggttgtgagcagtgcagctcccacagagcatcctgcatcctccgctccctgc
agcatctctgtgtctggatcggcgtccggtccgaactccgtttctctgactctgactacc
gccggactgaactgctccttctccgtggcgtcgccggacgtcggaacagactcctccgag
tgtcgcacagtcacagagcgtgagctgcaggggaatgaaacggagcggccgcccggcgcc
ggagttttcacctgcgcgttggatcacctggagcctggagccgcctacctgctgcaggtc
cgatcgcagacggacgatgagtcggccaacgtgacgctgcacaccagaccgtcagcggtg
gtcggcctggctgtgacctccaggacctgcagcagcctgggcctttcctggcaggccggc
ccaggcaggacgcagcgcttcaggctgcagctgcgggaaaaagcccagatctccaatcag
tccgatctgctgaagaatgagactttaggaagcacgacgacgcggcacacactcaacgac
ctgactccggggcgcctgtacgtcgttaccatggtgacggaggccggcggcctgcagagc
agcaggacggtcgaggctcggacagcgcccgccgccatttccaacgtcacctcggaaaac
aactgcaccagcctccggttgtcgtggcaacgtcccgaaggtgacgtggacgccatggtc
gtcaccttcttcgacaacgacacgatagtgcaggaaacgactgagcctggaaacgccacc
gaggtcgctgcctacaagctcacccccggctcggcctatcaggtggaagtgatgtcagtc
agcggctctctgacgaaccaatcaaaactcaccgtcaggacagctccggcggcggcgtca
cacctccagctgtctccttcttctgccggccttctgctaacgtgggcgccccccgctggc
cgctgggagaactacagggttttcctgttagatggcgtgcagcagctggtcgacaccgca
ctgggccgagatgcggtgaactttagctttccggggacagaactgacgcctggcaggcgg
taccgagccacgctgagagtggagagtggaggactggcgggcgagagcagctgttatggg
tcaacggctcccgctccggtggcagatctccacattcgccactcggatgagacgttgctc
agcgccatgtggaaccacgccccttctgggtcacgtgatgactacttcctcaccattcgc
catggtgacactatcgtggacatgcgccaggtggagccgaacatgagagagtgcacgttc
aacgtgctcacccctggacggcggtacgtcatcaccgtgacgacgaggagtgggaatctg
aacacatctgtatcagtggagggaaggacagttccgatggcgctgcgtacgatcagcctg
agcaactcgggagtcgacagccttcaggtgacctggaagaaaccaccaggagacgtggac
tcgtacaacctcactctgctgcgaaacagtgttgttgtccagaaccacagcgttccagct
ggttctaactctttggttctgaccagtttgacgcctggcaccctctacaggctgcaggct
gccactatcagcggggagctgcagtctaaaccaatcagtctggaggctcgaacagcgcca
gccgccgtctccaaggtgacggttgccaacggtggcaggtcagacgctctgtacgtctcg
tggctacctgcggatggcgtggtggacagctacctggtccagctggaggacaggaagcgg
accgtccacatgcttcccgtgtccagctcctcgccgcctgagtgctccttcaactcgctg
gaggccggacacctgtattcagtcgtcatagtaaccaggagcagcggattggagaacacc
actgtggtccaggctcgaacacaaccggcgacggctggaaacccaaatgctgttcacgct
ggaagagacgactacctcaaggtgtactggcatcacgcagcaggagatctggaccgctat
gtggttctgatcagctacaaccacaccatcctgcagaaccagagcgtccccaccggacac
aacgagtgcgccttctcgtctctgacgccagggcgactctacaccgtcaccgtggaaaca
tggagcggcagctacgtcagcagcatctccacccatggacgaactcttcctgcagctgtg
aggaatctgtcggtcaagaacgcaggaacatcagagctgaacgttacctggagccccgcc
ctcggagacgtcgaccattacgaggtgactctgctctttaacgacacccgggttttccct
cccgccatgctgggcagcgacgtgcatcatcacctgctgacctctctgaccccggggcgc
ctctataagatcatgttgtccaccttcagcgggcctcttcaggtcgcccaggtgatggag
ggacggacagttcccagcgctgcaaagaacctgaggctgattccccaacccggccggacg
gactctggcgctgggttgcttttctcctggacatcgggacccggagacctggacctgtac
aaagtgtctctgtcacccatggatggcgtttccatcgacattcgtcccgtccccaaacac
atctcttccctcgactttttagatctgatcccaggccaggcttaccgggtctccatccaa
tcacagagcgggacgctgaccaatagcaacacagcgtctggcagagcagctccagcagcg
gtcaccgccctgcaggccgataacggacacaccacccatagcctgactgtcagctgggag
cgtccggtcggcgcattcgatggctaccgcctgcagctgctggacgaagtgggaggcgtg
gtgaggaaccggtcggtggcggaggacagtcagagcgagcagctggagggtctgacctct
gggaagaggtaccgggtgaagctggtgacgctcagcggcggggtcacatcgctggaggcg
gccgcagcagaaggacaaacccgtcctgctgctgttcaaaacctgacgatcgtcatggca
aacacaacgtccctcagcttctcctggcgtccctcagacggccatgttgatgcctacgac
ctgtcgctctacagcgtctctgaggctacggccaatcacaggatgcagcatcagcagact
gctggcgagccggtggacaggaagaaggtgggtccagctgcagacggctgcgtcttctca
ggcctgagagcgggaagcctctaccgcctcctggtggtgagctggagccacgacctgagc
agcgactcgtcggtcctcgccagaaccgtcccggctccggtgtcggctctgcaggtccag
agttctggacggagcgacaggctgacggtcagctggcagcatggagtgggaagctgcagc
agctaccaggttctgctgtacgactcgtccggatccgctcaggacgctcagatgctgggg
gcggagcacagcagccacaccttcctcggtctgaccgccggccggctgtatcgcgctgat
gtcatcactcacagcggcgatctgaccaatagtgtctcaggatttggacgaacctctcca
gagccgcccagccacctgtctgtcagacctggcccgaccaatcagtcggtagagctgctg
tggtctggccccgcctccggggactatgacaacttcagcctgcagtgggcgccagacgac
ccgctgtccgtcacacagacgcaccgcagcagccgcatcgtcagcgggatgtttccagga
cgacagtacaacttcaccgtgactaccgtcagcgggggcggagccaaaagtggacctact
gccagcagccaaccaatccagaagagcgtcagaacaagtccatctcctctgcggtccatc
cactgcttccctctgtcttcctccgccctctcctgctcctggacgccaccgctcgctgac
ttcgactcctacgaggtcgaatgccgtcgccacgacaacggggagctgacctcgaccctg
cggctggccggcggagtcaccgcggtaacgctggaccatctggacgcgttcaggaagtac
gtggtgacggtcagggtgtcgtcagccgggcagccgagtccagcggcgactcagaccgcc
atcaccatgattgaccgtccccccatcccgccgcccggcgttcatgtcagcgagaagtcg
tccaaaatgacgtcgtcttccatcttgttccgcttcaactgttcctggttcagcgacgct
aacggagccatcagatacttctctgtgatcgtagccgagtcagacgccaatgaaaatctg
cagccggaacagcgccacccgatgccatcatatcgcgattacatcagcaattcctctgtc
agagcgtatcagacatcgtacttcccgagccgctgccctcaggacacagagagcgccggc
ggacaggtggtggaggtgaatctgggtgcaggtggagagcgtctgggcggagcctgcgat
cattaccatgacgacgacctgtaccttggttatggcggcttctgtgacgggccgctgaaa
cctaaaacgtcttacaggctgagtgtgcgagccttcaccaaactgtttgatgaaaaccac
agagaagtggccgagccgctcttctcagacacgtatctgtcgtcgccgctcaggacgcat
gcagagcctctagggggcgtggtggagggcctgagcgccgggatgtttctcatcggcatg
atggtggccgtcgtctccctgctggcctacaggcagcggctgcgcaaagtggccgtgcag
gagaacccggtggtgaggatgagtatgtggaaagaagtcccggcttcggggatgtatatg
ggagtgaggagtaaccggcgggtcaccagtcccgtcaaagcgtgccactttgagtcccat
ctgaacaaactgcaggccgactccaactacctgctgtccgaggagtttgaggatctgaag
gatgtgggccgcaaccagacgatggacgtggccagactgccggaaaaccgcgggaagaac
cgctacaacaacatcctgccgtacgactccacccgggtgaagctgtcctacctggaggac
gacccatgctccgactacgtcaatgctagctacatacctggcaacaactaccgccgggag
tacatcgccacccaggggccgctgccgggcacaaaggacgatttctggaggatggtgtgg
gagcatggcgtgcacaacgtcgtcatggtgacgcagtgtgtggagaagggacgggtgaag
tgtgatcagtactggcccgccgacaaggagccgctgtactacggcgatctggtcatccag
atgctgtcggagtccgtcctgccggagtggaccatcagagagttcaagatcatctcggag
aacagctgcagttatccgcggatgctgcgtcacttccactacacggtgtggcccgaccac
ggcgttcccgacagcacccagtccctgatccagttcgtccggaccgtccgggactacgtg
gaccgctcacccagcactggcgccaccgttgttcactgcagcgccggagtcgggcgaacc
gggaccttcatcgccttggaccgggttctgcagcagctggactccaagggaggcatcgac
ctgtacggctgcgtgttcgacctgcggctgcaccggcagcacatggtccagactgagtgt
cagtacgccttcctgcatcagtgtgtgagggacgtgctgcgagccaggaagcaccgcagc
gagcaggagaacccgctctaccccatctacgagaacttcaacccagaatactgccgcgat
ttcatctacaacggacgttaa
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