Xiphophorus hellerii (green swordtail): 116736709
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Entry
116736709 CDS
T07363
Symbol
lrig3
Name
(RefSeq) leucine-rich repeats and immunoglobulin-like domains protein 3
KO
K24610
leucine-rich repeats and immunoglobulin-like domains protein 1/3
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
116736709 (lrig3)
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
I-set
Ig_3
LRR_4
ig
Ig_2
LRR_5
LRR_1
LRR_9
V-set
C2-set_2
LRR_6
C1-set
LRRCT
PRIMA1
Motif
Other DBs
NCBI-GeneID:
116736709
NCBI-ProteinID:
XP_032445287
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Position
17:18577432..18602853
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AA seq
1106 aa
AA seq
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MLSSPQPRSLVRFAVFFLPFVGLERGSGAHAGTCPPPCVCFGELVDCGRVKRGRIPDTIP
EWTVQLDLSHNKLQVLDGNLFSRLPHLKELKLNHNKLEAVPDLGPYASNITTLILANNRI
SGISEEQLGPFASLETLDLSSNKIVEIKTSSFPALPLKNLFLFNNRISSLESGWSTNLAS
TLQVLELSHNRISNIPARFFQLPNLQHLDLSRNQIRRVEGLTFQDLPTLRSLKLQRNRLS
GLMDGAFFGLSNMEVLQLGFNNLTEVSKGWLYGLGALQQLHLEHNTISRIQPETWKCCQK
LSKLNLSSNHLSRLEESSFDGLSLLDELHVGNNRLSFIAGGAFRGLSNLQMLDLQNNEIS
WTIEDMNGPFSALEKMKTLFLQGNQIRSVTKKSFSGLDELQHLDLSNNGIMSIQANAFSQ
MKNLQELRLNTSSLLCDCQLKWLPIWVEEQSFLPCVNASCAHPQMLKGRSVFLVRQEEFV
CDDFPKPKITVQPETQSALKGTNVTFVCSAASSSDSPMTFAWKKDNEVLNDAEIHNQAHL
RVQDDAGSETEVTEYTTTLQLRNVEFSNEGKYQCVISNHFGSSYSSKARLTVNILPSFTK
TPMDLTIRAGAMARLECAATGHPSPQIAWQKDGGTDFPAARERRMHVMPEDDVFFIAGVK
TEDIGVYSCTAQNTAGVISANATLTVLETPYFLRPLTDRTVAKGETAVLQCIAGGSPPPR
LNWTKDDSPLVVTERHFFAAANQLLIIVDAAEVDAGKYTCEMSNALGTERGNVRLAVLPN
PNCDSGVQSGAGNVMGSGSGADDDGWTTVGIVIIAVVCCVVGTSLVWVVIIYHTRRRNED
CSVTNTDETNLPADIPSYLSSQGTLADRQDAYIPSESGSSHQYIASSYSGFYLQTKDVNG
LCQLDTGSEADMEAAIDPLLCHYQGPIGSLLCRDNIYPSDPSEVFTGFSIDQKPVGMESY
SGSLTKPKTMDILLSEHFDVCPPSLVMQLPNTSLHQDPTPQQRDRQTTADEEDAFDCGKP
HKCVSPCNTFMGTFGKAPWTPHKDLYIPPSVTYHGITLHENPYTALDVDSDLEQSIKDSL
EQSGRVYEQPFDGRRTDAISQRRMSS
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atgctttcctctccgcagcctcgcagtctggtgaggtttgccgtgttttttctgccgttc
gtgggactggagcgtggatcgggggcccacgctgggacgtgcccccctccctgcgtgtgt
tttggggaacttgtggactgcggtcgggtgaaaaggggccgaattccagacacgatcccg
gagtggacagttcagctggacttgagccataacaaattgcaagtgctcgacgggaatttg
ttttccagactgccgcatttaaaggaactaaagctgaatcacaacaaactggaggcagta
ccagatctgggtccctatgcttcaaacatcacaaccctcattctagcaaacaacaggatc
agtgggatctcggaggagcagctcggacccttcgcctccctggaaacgctcgacctcagc
agcaacaaaatagtggaaataaagaccagctccttcccggctctgcctctgaagaacttg
ttcctcttcaacaatcgcatctcgtctctggagtcgggctggtccaccaacctggccagc
actctgcaggttcttgagctcagccacaaccggatctccaacatcccagccaggttcttc
cagctgcccaacctgcagcatctggatttgagcagaaaccagattcgccgggtggagggc
ctgactttccaagacctgcccaccctccgctcgctgaagctacagaggaaccgcctctct
gggctgatggacggggccttctttggcctcagcaacatggaagtcctgcagctgggcttt
aacaacctgacggaggtgagcaaaggctggctgtacggcctgggggctctgcagcagctc
cacctcgaacacaacaccatcagcaggatccagcctgaaacctggaagtgttgccagaag
ctcagcaagctcaacttgtcctcgaatcacctgtccaggctggaggagtccagcttcgac
ggcctcagcctgctggacgagctccatgtgggaaacaaccgcttgagcttcatcgcgggc
ggagcgttccgcggcctctccaacctgcagatgctggatctccagaataatgaaatctcc
tggactattgaagacatgaatgggccgttttctgctcttgaaaagatgaaaacgctgttc
ctgcaggggaaccagattcgctcggtgaccaaaaaatccttctcaggcctggacgagctg
cagcacctagatctgagcaataacggcatcatgtccatccaagctaacgccttctcccag
atgaaaaacctccaggagctgcgtctgaatacctccagtctcctgtgtgactgccagctg
aagtggcttcccatctgggtggaagagcaaagcttcctgccctgcgtcaatgccagctgc
gcccacccgcagatgctgaagggcaggagtgtgttcttggtacggcaggaggagtttgtg
tgtgatgactttccaaagcccaagataacggtgcagccagaaacccagtcagccctcaaa
ggaaccaacgtgacattcgtctgctctgccgcgagctccagcgactcccccatgaccttt
gcctggaagaaagacaacgaagtcctgaacgatgccgagatccacaaccaggcccaccta
agggtgcaggacgatgcgggaagtgagacggaagtcacagagtacaccaccacattgcag
ctgcggaacgtggagttctccaacgaggggaagtaccagtgcgtcatctccaaccacttt
gggtcgtcatattcctctaaggcccggctcacggtgaacatacttccttctttcaccaaa
acgccaatggacttgacgatccgggcaggagcgatggctaggctggaatgtgcggccacc
ggtcacccatcccctcagatcgcctggcagaaagacggaggcactgactttcctgccgct
cgcgagcgtcgcatgcacgtcatgcctgaggatgacgtcttcttcattgcgggtgtcaag
acggaggacattggtgtctacagctgcacggctcagaacacagctggagttatttcagcg
aatgcaactctaactgttcttgaaacgccctatttcctgcgccctctcacggatcgaacc
gtggccaagggcgagacagccgtcctccagtgcatcgccggtggaagccctcctcctaga
ctgaactggaccaaagacgacagtcccctagtggtcaccgagcgccacttctttgccgct
gccaaccagctcctcattattgttgatgctgctgaggtggatgcgggaaagtacacttgc
gagatgtcgaacgctctgggcacggagagggggaacgtacgcctggccgtcctgccgaac
cccaactgtgactctggagtgcagagtggcgccgggaatgtcatggggagcggatcaggg
gcagatgatgatggctggaccacagtggggattgtcatcatcgcggtggtttgctgcgta
gttggaacttccttggtctgggtggtcatcatctaccacacccgccggcggaacgaggac
tgtagcgtcaccaatacagatgagaccaacctacctgcggatattcccagctacctctcc
tcccagggaacactagcagaccgacaggatgcctacatcccgtctgaaagcggtagcagc
catcagtacatagcatcatcctacagtggtttctacctgcagaccaaagacgtgaacggt
ctttgtcagctggatacaggaagtgaagctgatatggaagcagccatcgatcctttgctt
tgccactaccaaggtccgattggctcactgctttgtcgcgataacatatatcccagtgac
ccatccgaagtcttcacaggtttttcaattgaccaaaagccggttggcatggagtcttac
agcggcagcctgaccaaacccaaaacgatggacattttgctatcggagcattttgacgtg
tgcccgccctctctagtgatgcagcttccaaacaccagcctacatcaagaccctacgcct
cagcagagggaccggcagacaacggcggatgaggaagatgctttcgactgtggaaaacct
cataaatgtgtctctccctgcaacactttcatgggtacgtttgggaaagctccttggact
ccccacaaggacctatacatcccgccgtcagtcacgtatcatgggataactcttcacgag
aatccttacactgctttggacgttgactcggacctcgaacagagcatcaaggactcattg
gagcagagcggccgtgtgtatgagcagccgtttgacggccgtagaactgatgccatctca
caacgtaggatgagctcctag
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