KEGG   Xiphophorus hellerii (green swordtail): 116736765
Entry
116736765         CDS       T07363                                 
Symbol
kdm5a
Name
(RefSeq) lysine-specific demethylase 5A
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
xhe  Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:xhe00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:xhe01009]
    116736765 (kdm5a)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:xhe03036]
    116736765 (kdm5a)
Enzymes [BR:xhe01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     116736765 (kdm5a)
Protein phosphatases and associated proteins [BR:xhe01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     116736765 (kdm5a)
Chromosome and associated proteins [BR:xhe03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    116736765 (kdm5a)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel PHD ARID JmjN zf-C5HC2 PHD_5
Other DBs
NCBI-GeneID: 116736765
NCBI-ProteinID: XP_032445400
LinkDB
Position
17:complement(13626169..13644610)
AA seq 1743 aa
MTCFPRIHFDMAAFAEFVPPPECPVFEPSWEEFSDPLGFINKIRPIAEKTGICKIRPPQD
WQPPFACDVRNFRFTPRVQRLNELEALTRVKLNFLDQIAKFWELQGSKIRFPHVERKILD
LYQLSKIVSSEGGFETVCKEKRWSKVATRMGFPPGKGTGSLLRSHYERFLYPYELFQSGA
TLTGVQRLYDEGADGEEVDEGVGEEAMEEDEQEEEDENDKEKDKEGDVTQTKDQLPSERR
SRRLKSERENKEPTSLKIFGTSPKMVGLEIVSADDGFIKKQRHLKAQAFAIKMRPRKETL
EVNFIDLYFCLVCGRGDEEDRLLLCDGCDDSYHTFCLIPPLQDVPKGDWRCPKCVAEECS
KPREAFGFEQAVREYTLQSFGEMADHFKSDYFNMPVHMVPTELVEKEFWRLVSSIEEDVI
VEYGADISSKDVGSGFPIKDGKRRLLGDEEEYANSGWNLNNMPVLEQSVLTHINVDISGM
KVPWLYVGMCFSSFCWHIEDHWSYSINFLHWGEPKTWYGVPASAAEKLEAVMKKLAPELF
DSQPDLLHQLVTIMNPNVLMDHGVPVYRTNQCAGEFVVTFPRAYHSGFNQGYNFAEAVNF
CTADWLPLGRQCVAHYRRLHRYCVFSHEELLCKMVADPENLDVELAAAVFKEMDDMIEEE
TKLRQAVQEMGVLSSEQEVFELVPDDERQCYKCKTTCFLSALTCSCSPDRLVCLHHAKDL
CDCPLGSKCLRYRYGLEEFPSMLYGVKTRAQSYDTWAKRVAEALAADQKNKKDLIELKVL
LEDAEDRKYPENVLFRRLREMVKEAETCSSVAQLLLSRKQRHSSRLRSDSSRNRTKLTVD
ELKAFVEQLFRLPCIISQARQVKELLETVEDFHERAQVALSDEMPDSSKLQELLDLGSGL
DVELPELPKLKQELQQARWLDEVRGTLAEPHRVTLELMKRLIDSGVGLAPHHAVEKAMAE
LQEVLTVSERWEDKARACLQARPRHSMVTLENIVLEARNIPAYLPNVLALEEALQKAKDW
TSKVEAIHSGSSYAYLEQLESLLARGRSIPVRLDPLGQVESQVASARAWRERTARTFLKK
NSTYTLLQVLSPRVDIGVYSNSKSKRKRVKELMEKERSGYDPDALSDLEENLEEARDPSA
VVAAFKAKEQKEVEAIHSLRAANLAKMAMADHIEEVKFCLCRKTASGFMLQCELCKDWFH
GACVPLPKTGTQKKVGVSWQSNSKDSKFLCPLCQRSRRPRLETILSLLVSLQKLPVRLPE
GEALQCLTERAMSWQDRARQALATEELSSALAKLSVLSQRMVEQAAREKTEKIINAELLK
AAANPDLQGHIQTFQQSGFSRAASPRPSVDYDDEETDSDEDIRETYGYDMKDPGEVKPYL
FCDEEIPVKSEEVVSHMWPAATPSFCAEHAYSSASKSCVQNLGTPRKQPRKTPLVPRSLE
PPVLELSLQAKAQLEDLMMLGDLLEVSLDETQHIWRILQATHPPSEERFLQVMEPDNSLL
EKPLKIKFKDSEKKRKRKLERAEQHHLLMAAAGGAAAMGDMRLQKSKELKRVGLELGLGG
KPKKKKLKLNLEKNREMKQLAKRLAKEEKERKRKEKAAAKAEAIKDVLEKRKEKKILDIP
SKYDWSGAEDSNDENAVCAAKNCQRPCKDKVDWVQCDGGCDEWFHQVCVGVSCEMAENED
YICVDCSEKAAGAVDGVALEDVAGESIVVLSPCGTAAAMAPWSAVSLLNPAASHQQQEPR
QDS
NT seq 5232 nt   +upstreamnt  +downstreamnt
atgacttgtttcccccggattcacttcgacatggctgcgttcgccgagttcgttccccct
cccgagtgcccagtgtttgagccgagttgggaggaattctcggatcctttaggattcatc
aacaagatccgaccgattgcagagaaaacgggcatctgcaagatcagacctccccaggac
tggcagcctccgtttgcctgtgatgttcgcaacttccgcttcacacccagagtgcagaga
ctcaatgaacttgaggcactcactcgagtaaaactgaacttcctggatcagatcgcaaag
ttctgggagctgcaaggatccaagattcgtttccctcatgtagagagaaagattttggac
ctctatcagctcagcaagattgtgtcgtctgaaggcggatttgagacggtgtgcaaagag
aagagatggtccaaagtggcgactcgcatgggcttcccaccgggaaaaggcaccggttct
cttctacgttcgcattatgagagattcctttacccttatgagctcttccagtctggagct
actcttaccggcgtccagcggctgtacgatgagggagcagatggggaagaagtggacgag
ggtgtcggggaggaggcgatggaggaagacgagcaagaagaggaggatgaaaacgacaag
gagaaagacaaagagggtgacgtgactcaaaccaaagatcagcttccttcagagaggcga
tccagacgactaaagtcggagagggaaaacaaggagcccacaagcctcaaaatcttcgga
acgagtcccaagatggtcggattggagattgtatcagctgacgacggattcattaagaag
cagcggcatctcaaagcccaggccttcgccattaagatgagaccacgcaaggagactctg
gaggtcaactttattgatctttatttctgcctggtgtgcggacgaggcgacgaggaagac
cggctgctgctgtgtgacggctgtgacgacagctaccacactttctgcctcattccaccc
ctgcaggacgtgcccaaaggagactggaggtgcccgaagtgtgtcgctgaggagtgcagt
aagccccgagaggcttttggctttgagcaggctgtgagggagtacactctgcagagtttt
ggcgaaatggccgaccactttaagtccgactatttcaacatgccagttcacatggttccg
acagagttggtcgagaaggagttctggcgcctggtcagcagcattgaggaggacgtcatc
gtagagtacggcgctgacatcagctccaaggacgtgggcagtggttttcctataaaggac
ggcaagaggaggcttctgggagatgaagaggaatatgcaaactcgggctggaacttgaac
aacatgccagtactggagcagtccgttctcacacacattaatgttgacatatcaggcatg
aaggtgccctggctgtacgtgggcatgtgtttctcctcgttctgctggcacatcgaggac
cactggagctactctatcaatttccttcactggggagaacccaaaacctggtatggagtg
ccggcctctgcagcagagaaactagaggctgtcatgaaaaagctggctccagagcttttt
gactctcagccagacctcctgcatcagctggtcaccatcatgaatccgaacgtcctcatg
gatcacggcgtccccgtctaccgaaccaatcagtgtgcaggggagttcgtggtgaccttc
ccgagggcctaccacagcggcttcaaccagggctacaactttgcagaagctgtgaacttc
tgcaccgcagactggctgccgttgggccgtcagtgtgtcgcccactaccgccgcctccac
cgttactgcgtcttctcccacgaggagctcttgtgcaaaatggtggccgatcccgagaac
ctcgacgtggagctggcggcagccgtcttcaaagaaatggacgacatgatagaggaggaa
acgaaactgaggcaggctgtccaggagatgggagtgctctcatcggagcaggaggttttc
gaactcgttccagacgacgagcgccagtgctacaagtgtaagacgacgtgtttcctgtct
gcgctgacgtgctcctgcagcccggataggctcgtctgtctccatcacgctaaggacctc
tgcgactgtcccctcggcagcaagtgtctccggtaccgttatggtctggaggagtttccg
tccatgctgtacggtgtgaagacgcgggcacagtcctacgacacctgggccaagcgggtc
gcagaggcgttagcagcagaccagaaaaacaagaaagatctaatagagctgaaggttttg
ctggaggacgccgaggacaggaagtatcccgaaaacgttttgttccgccgcctgagggag
atggtgaaggaggcagagacgtgttcctctgtggcccagctgctgctcagccgcaagcaa
aggcacagcagccgccttcgttctgacagtagccgcaaccgcaccaagctgactgtggac
gagctcaaagctttcgtggagcagctcttccggctgccctgcatcatcagccaggcgcga
caagtcaaagagttactggagacggtggaggacttccacgagcgagcccaggtggctcta
tccgacgagatgcccgactcctccaagctgcaggagcttttggacctgggcagcggcctg
gatgtggagcttcctgagctgcccaagctaaagcaggagctgcagcaggcacgctggctt
gatgaggtccgtggcacccttgctgagccgcaccgcgtcactctggagctaatgaagcgg
ctgatagactctggagtcggcttagcgccgcatcacgctgtggagaaagcaatggcagag
ctacaggaagtcctcaccgtctcagagagatgggaggataaagcacgggcctgcctgcag
gctaggcctcgccacagcatggtgacgctggagaacattgtgctggaggcaaggaacatc
ccagcatatctgcctaatgttctggctctggaagaggccctgcagaaggccaaggactgg
acctctaaggtggaggccatccacagcggaagcagctacgcctacctggagcagctggag
agcctgctggccagaggccgctccatccccgtgcggctcgatccgctcggacaagtggag
tctcaggtggcctcggctcgagcctggagggagcggaccgcccgcaccttcctcaagaag
aactccacctacactctgctgcaggttctcagtcctcgtgtggacatcggcgtgtacagc
aacagcaagagcaagcggaagcgcgtcaaggagctcatggagaaggagcggagcggctac
gaccccgacgccctcagcgacctggaggaaaacctggaggaggcccgagacccctcggcc
gtggtggccgccttcaaagccaaggagcagaaggaagtggaggccatccactcgctccgc
gctgccaacttagccaagatggccatggcggaccacatcgaggaagtcaagttctgcctg
tgccggaagacggccagcggcttcatgctgcagtgcgagctgtgcaaggactggttccac
ggcgcctgcgtccctctgcccaagacggggacgcagaagaaagtgggcgtcagctggcag
agcaacagcaaagactccaagttcctgtgtccgctgtgccagaggtcgaggaggccgaga
ctggagaccatcctgtccctgttggtctctctgcagaagctgccggtgcgtctgccggaa
ggagaggcgctgcagtgtttaacggagcgggccatgagctggcaggatcgagcacgtcaa
gctctggctaccgaggagctgtcctcggctctggcgaagctttccgtgctcagccagcgc
atggtggagcaggcggcgagggagaaaaccgagaagatcatcaacgccgagctgctgaaa
gcggccgccaaccctgacctgcagggtcacatccagacctttcagcagtccggtttcagc
cgagcggcttcaccacggccgtctgtggactacgatgacgaggaaacggattcagacgag
gacatcagggagacttatggttacgacatgaaggacccaggtgaggtgaagccctacctg
ttttgcgatgaagagatccccgtgaagtctgaggaggtggtcagccacatgtggcccgcc
gccacgccttcattctgcgccgaacacgcctactcgtcagcttccaagtcctgcgtgcaa
aacctcggcacacccagaaagcaaccgcggaagacccccctggtgccccggagcctggag
cccccggtgctggaactgtccctgcaggctaaggcgcagctggaggacctgatgatgctg
ggagacctgctggaggtgtccctggatgaaacccagcacatctggaggattctgcaagcc
acgcaccctccctctgaggagagattcctgcaggtcatggagcctgacaactcgctgctg
gagaaaccgctcaaaatcaaatttaaagattccgagaagaagcgaaagcggaagctggag
agagccgagcagcaccacctgctgatggccgccgccggtggcgccgccgccatgggagac
atgaggctgcagaagtccaaggagctgaaacgggtcggcctggagctcggcctcggcggc
aagcccaagaagaagaagctgaagctcaatctggaaaagaaccgggagatgaaacagctg
gctaagcggttggccaaggaggagaaggagaggaagaggaaggagaaggcagccgcgaaa
gccgaggccatcaaggacgtcctggagaagaggaaggagaagaagatcctggacatcccg
tccaaatacgactggtcgggcgccgaggactccaacgatgagaacgcagtgtgcgcggcg
aagaactgccagaggccgtgtaaagacaaggtggactgggtgcagtgcgacggcggctgc
gacgagtggttccaccaggtctgcgtgggcgtgtcgtgcgaaatggcggaaaacgaggac
tacatttgcgtggactgctctgagaaggcggcgggcgcggtcgacggagtggccctggag
gacgtggcgggggagagcatcgtggtcttgtctccgtgtggcacggcagcggccatggct
ccgtggtccgccgtgtccctcttaaatccggcggcttcacaccaacagcaggagcctcgg
caggacagctag

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