Xiphophorus hellerii (green swordtail): 116736778
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Entry
116736778 CDS
T07363
Symbol
arid2
Name
(RefSeq) AT-rich interactive domain-containing protein 2 isoform X1
KO
K11765
AT-rich interactive domain-containing protein 2
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
116736778 (arid2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xhe03000
]
116736778 (arid2)
03021 Transcription machinery [BR:
xhe03021
]
116736778 (arid2)
03036 Chromosome and associated proteins [BR:
xhe03036
]
116736778 (arid2)
Transcription factors [BR:
xhe03000
]
Eukaryotic type
Helix-turn-helix
ARID
116736778 (arid2)
Transcription machinery [BR:
xhe03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
116736778 (arid2)
Chromosome and associated proteins [BR:
xhe03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
116736778 (arid2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARID
RFX_DNA_binding
FOXP-CC
TSTD2_N
Motif
Other DBs
NCBI-GeneID:
116736778
NCBI-ProteinID:
XP_032445417
LinkDB
All DBs
Position
17:complement(17110966..17143849)
Genome browser
AA seq
1667 aa
AA seq
DB search
MANSTGKNLLDQRRKGQAFLDELRQFHQSRGSPFKKIPIVGGKELDLNALYIRVVSLGGF
AKVSDKNQWAELGEEFNFPRSCSNAAFALRQYYLRYLEKYEKVHHFGEDDEEAQPGNPKA
FLPVGAIPSSYNYQQHVVSDYLRQSYGLSTDFTQPCDYNKLVLSLLSGLPNEVDFAVNVC
TLLSNESKHAMQLDKDPKLVTLLLAHTGVFDDSLGNFSAVFGTDWKEKTSRDFVRFWKEV
VEDTEVRELIWDKSSSAQDGTFREDHWQSLFHPPRNPGTSDMEAQRVLQVAVILRNLSFE
EANVKLLAANRTCLRFLLLCAHCNLISLRQLGLDTLGNVAAELQLDPVDFRTTHLIFHTI
TKCLMSRDRFLKMRAMEILGNLSKADDNGVLICEYVDQESYREVIMLLTLPDLMLLMASL
EVLYLLAQLGEIPCSKIASVDHSIDLLVRLVSVDLHTFGPDALTAVRLIEHQANAEQAAE
VRPQLVEQVPAAVQGATAPVTRVPVQSNVPPPGIVELDGEKFTLQWLNAHFETNPEGSVS
RSEMYSEYLATCSKMGRGNILNSTGFLKCLRTVFPNHTMRRQDEAKASNPLQILLVGIRR
RAIPLPIQLYYQQTQQQHQNPAAAPPPPVARHEAPGDPQAPPPGLPPGHPNPGPQFVRSL
GVSNSAPPMASPAQESSRVNHPAVPRHPGPPQASPQLPPTLVRTAPGVQITTSAVAAQNH
SPQNPAPPPVPQQQHSPMLPTGAPVTLFQPVPQGHILTARVQGVCSQVTQQPPLPQTLPV
SGPQGGAPQVDAQCTATVSGPPSIQVGGSQAVGIMGVANSQGSRVTFQNIAPKPAPNQSG
GPTATLAPPNQQPQPQQSVVIVSPNPQQNAAYTPAIHQIVLANPSSIPGAQTVQIAGQPG
AASSPCSPAASHSNTQVQSNQAVNHALSTIRQQQQQPPPPLQIISQTPPTQPTSTESSLI
KQLLLPKRGPSTPGGKLILPAPQVPLPNNTIAPNPQVIYQNPSPQPVSVQLVPGQLPAAG
APPLQAVQLLPGQLISTSTPGGAAIIQAPTAAGQVTFTVVPNTGFTTSAAAVAAVSQGAV
APGVPPPPFSTGTVPHHVSTGAPLPPPLPAPLRGDKIICQKEEEAKDATGLHIHERKIEV
MENSSLAEGDPSNNKTRNGDVAAGAKLLNGGKCVEPNLPPYHSGNSQGVLNGPVTESLSS
NGKQAFSPGPNAPLEGNADPKKTLVNGVCDFERGDSGGNFNKNIPNHIASKQYLGNGEVG
ASEKTSDQSLPSPPPPQQDTAKAQQAERLANGPQAAAHRPPSELTNGPLGLALGHGTPVL
RQQLLPNSSLPCAVTSQNPAASPANGVASEPRGLKRPAENDERGPTAVATSSGIPSKVGV
RIITISDPNNAGSSATMVAVPAGTDPSTVAKVAIENAAQQRNCSPTQAAGATPTATPPPA
PSSQPAAAANHSPHLPAQQTPTSPTEPGRKAGQHFKCLWQSCKRWFETPSQVFYHAATQH
GGKEVYGGHCLWEGCEPFPRQRLSFITHLQDKHCSREALLAGLKLEEQQAQSPNQTSSQT
PPAAGSTPAQRAPKAIVNHPSAALMALRRGSRNLVFRDFTDEKEGPVTKHIRLTAALTLK
NIAKHSDCGRMLVKRHETHLSVLALSNMEVSTTLAKCLYELTRSLQA
NT seq
5004 nt
NT seq
+upstream
nt +downstream
nt
atggcaaattcgacggggaaaaatctcctagatcagcgaaggaaaggacaggctttcctg
gacgagctgcggcaatttcaccaaagcagaggatcgccgttcaagaagattcctatcgtg
ggtgggaaagagctggatctgaatgctctctatatcagagtcgtctctttaggtggattc
gcgaaggtgtctgacaaaaaccaatgggcagaacttggagaagagtttaactttccgagg
agttgctccaacgcagcattcgctttaagacagtactacctacgatacctggagaagtac
gagaaggtccaccacttcggcgaggacgatgaagaggctcagccggggaatcccaaagcc
ttccttccagtcggtgcaatccccagctcctacaactaccagcagcacgttgtatcagac
tatctccgccaaagttatgggctgtctacggacttcacccagccgtgcgactacaacaaa
ctggtgctctcgctgctctcgggcctacccaacgaagtggactttgccgttaacgtttgc
acgctgctctccaacgagagcaagcacgccatgcagctggacaaggaccccaagctggtc
acgttgctgctggcccacaccggcgtcttcgacgactctctaggcaacttctctgcggtg
tttgggacagactggaaggagaaaacctcgcgcgactttgttaggttctggaaggaggtg
gtggaggacaccgaggtcagagagctgatctgggacaagagcagctcagcacaagatggt
acgttccgggaggaccactggcagagtctcttccacccgccgcggaacccaggcaccagt
gacatggaggcccagcgggtgctgcaggtcgccgtcatcctgcgaaacctctccttcgag
gaggccaacgtcaagctgctggcggccaaccgaacgtgcctgcgcttccttttgctctgc
gcccactgtaacctcatctcactccgacagctcgggctcgacacgctgggcaacgtggct
gctgagctccaactggatcccgtcgattttcggacgacgcacctgatctttcacaccatc
accaaatgcttgatgtccagggacaggttcctcaaaatgagagctatggagatcctgggt
aacctgagcaaagcggacgataacggcgtattgatctgcgagtatgtggaccaggagtcg
tacagggaggtgatcatgctgctcactctgccggacctcatgctcctcatggcctccttg
gaggttctgtacctgctggcccaactgggagagattccttgcagcaagatcgcgtcggtt
gaccacagcatagacctgttggtgcggttggtgtcggtagacctccacacgttcgggccc
gacgccctgacggcagtgcggttgatcgagcaccaggccaatgccgagcaggctgccgag
gtccgaccgcagctggtggagcaggtacctgcagcggtgcagggggcgacggcaccggta
acaagagtccctgttcagtccaacgtaccaccacctggtatcgtcgaactagatggggag
aagtttacgctgcagtggctgaacgcacactttgagacgaaccccgagggctcggtttca
cgatccgaaatgtactccgagtacctggctacatgcagcaaaatgggacgcggcaacatc
ttgaactccaccggcttcctaaaatgcctgcggacggtgttccccaaccacactatgagg
cggcaagacgaggcaaaagcgagcaacccgcttcagatcctcctggtgggaataaggcga
agagcgatccctctccccatccagctgtactaccagcaaacccagcagcaacaccagaac
ccggccgcagctcctccacctccagtagctcgacacgaagcacctggagatcctcaagct
ccaccaccagggttaccgccaggacatcctaatcctggaccacagttcgtgcggtcccta
ggtgtctctaatagcgccccacccatggcctcgcccgcacaggaaagttctcgtgtaaac
cacccagctgttccccgtcaccctggtcccccacaggcgtcgccacagttacccccaacc
ctggtccgaacagctccaggggtacagatcacaacgtccgctgtggccgcccagaatcac
agcccacagaacccggcgccccctcccgtgcctcagcagcagcactctcccatgctcccc
acaggagctcccgtcacgctatttcagccagtaccacaaggccacatcctcaccgcccgg
gtacaaggtgtgtgctcccaggtcacccagcaaccacctctgcctcaaaccctccccgtc
tctgggcctcagggtggagccccccaggttgacgcccagtgtactgctacggtttcagga
cccccttccatccaggtgggaggcagccaggctgtagggataatgggcgtggccaactcc
caaggttctcgcgtaacatttcaaaatattgctcccaaaccagcaccaaaccagtcaggt
gggccaacagccacgttagcccctcccaaccagcagcctcagcctcaacagagcgtagta
atagtcagtcccaatccccagcagaatgcagcctacaccccagccatacaccagatcgtt
cttgccaacccctcctccattcccggtgcccagactgtccagatagcggggcagcccgga
gctgcttccagtccctgctcacctgctgcctctcactcaaatacccaggtccagtccaat
caagctgtcaaccacgcactgtccacgatacggcaacagcagcagcagccgccgcctcct
ctccaaatcatatcccaaactcctcccactcaacctacctccactgaatccagcttgatc
aaacagctactgcttccaaagcgagggccttctaccccgggagggaagttgatcctgccc
gccccacaggtcccccttccgaacaacacgatagcccccaacccacaggtcatctaccag
aacccctctcctcagccggtcagcgtccagctggtccctggccagcttcctgctgcaggt
gccccgcccctccaggcggtccagctgctgccagggcagctcatctccaccagtacgccg
ggcggagctgccatcatccaggcccccacagcagccggacaagtcacgttcaccgtggtc
cccaacactggcttcaccacctctgctgctgccgtcgccgccgtcagccagggcgctgtg
gctccgggtgtcccgccaccgccgttttctactggaacagtcccccatcacgtctcgaca
ggcgcaccgctcccaccgccactgccggctcccctcagaggagacaagatcatttgtcag
aaggaggaagaggccaaggacgccacagggctgcatatccacgaaaggaagatagaggtg
atggagaactcttcgttggcagaaggagacccttcgaacaacaaaacaaggaacggggac
gtcgcagcaggtgccaagctactaaacggtgggaagtgcgtggagccaaatctacctcca
tatcactcagggaacagccagggagtactcaacggcccggtaacggagagcctctcctcc
aacgggaagcaggctttctctccaggcccaaacgcccctctcgagggcaacgccgacccc
aaaaagaccctggtcaacggggtgtgtgactttgagcggggcgatagcggtggcaacttt
aacaaaaacattccaaatcacattgcttccaaacagtacttggggaacggggaggtgggc
gcctctgaaaagacttcagatcagagtctgcctagtccgccccctccccagcaggacact
gccaaagcccagcaggccgagcgcctggccaacggaccccaggctgcagctcaccggccg
ccctcggaactaaccaacggacctctggggctggcgctggggcacggcacgcctgtgctc
agacagcaactgctccccaactcctcgctgccctgtgccgtcacttcgcagaatcccgcc
gcctctccggcgaacggcgtggcctcagagccccggggcctcaagaggcccgccgagaac
gacgagcgtggcccgactgcggtggcgacttcctccgggatccccagcaaggtgggagtt
cggatcatcaccatcagcgaccccaacaacgccggcagcagcgccaccatggtggcggtg
ccggcaggaacggacccaagcacagtagccaaagtagcaatagagaacgccgctcagcag
aggaactgctcgcctacacaagcagctggcgccacgccgactgccaccccgcccccagct
ccctcctcgcagccggcagcagcagccaaccacagtccgcacctcccagcgcagcagacc
cccacgtcgccgacggaaccgggcaggaaagcagggcagcacttcaagtgtctgtggcag
tcgtgtaaacggtggttcgaaacgccgtctcaagtgttttaccacgcagcaacgcaacac
ggaggaaaagaagtgtatggagggcattgtctgtgggagggatgtgaacctttcccccgg
cagagactgtccttcatcacacatctgcaggacaaacactgctccagagaggctttgctg
gctggactcaaactagaggagcagcaagcacaaagtcccaatcagacatcttcccagact
ccgccagcggcaggcagcactccggcacaacgagcaccgaaagcaatcgtcaatcatccg
agcgcagctctcatggccctacgtagaggttctcgaaacttggtcttcagggacttcaca
gacgagaaggagggaccggtgaccaaacacatacgactaactgctgccttaactttaaag
aacatcgccaagcactctgactgtggtcgcatgttggtaaaaaggcacgagacgcacctc
tctgtgctcgctttaagtaatatggaggtctccaccacgctcgccaaatgcctttatgaa
ctcacgcgctcgcttcaggcttaa
DBGET
integrated database retrieval system
