Xiphophorus hellerii (green swordtail): 116736810
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Entry
116736810 CDS
T07363
Symbol
rbm17
Name
(RefSeq) splicing factor 45 isoform X1
KO
K12840
splicing factor 45
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116736810 (rbm17)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xhe03041
]
116736810 (rbm17)
Spliceosome [BR:
xhe03041
]
Complex A
U2 snRNP components
U2 related factors
116736810 (rbm17)
Complex B
116736810 (rbm17)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
G-patch
RRM_1
Motif
Other DBs
NCBI-GeneID:
116736810
NCBI-ProteinID:
XP_032445489
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Position
17:complement(17702397..17711038)
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AA seq
419 aa
AA seq
DB search
MSLYDDLGVGASDTKTEGWSKNFKLLQSQLKVKKAALTQAKTQRMKQTTVLAPVIDLKRG
GSSDDRLNTDTPPHAAVGLKDAVPSGFSSGDVLIPLADEYDPMFPNDYEKVMKRHREEMQ
RKREQERQKEIEEREKRRKERHEGSAPSGFSRFPATEEDSDEEEEYEKEWRKRSMGGAAI
APPSSLVDREGSSPYEDEGRPGRGAKAAIPPPMYEDSDRPRSPPGPTSSFLANMGGTVAH
KIMQKYGFKEGQGLGKHEQGLSTALSVEKTSKRGGKIIIGDAAEKPGSSQSGAADPSSGG
SAADSSKKSEANPLTEILKNPTKVVLLRNMVGRGEVDEDLEGETKEECEKYGKVVKCVIF
EIAEVTDDEAVRIFLEFERVESAIKAVVDLNGRYFGGRVVKACFYNLDKFRLLDLGEQV
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgtacgatgacctcggtgtcggtgcaagtgacaccaagaccgaaggctggtcc
aagaacttcaagctgctccagtctcagctgaaagtgaagaaagcggccctgacccaggct
aagactcagcggatgaagcagaccaccgttctggctcccgtcatcgatctgaagagagga
ggttccagcgacgaccggctcaacacagacactcctccacacgccgccgttggactcaag
gatgcggttcccagcggattctcctccggggacgttctgatcccgctggccgacgagtac
gaccccatgttccccaacgactacgagaaggtgatgaagcgccaccgggaagagatgcag
cgcaagagggagcaggagcgacagaaggagatcgaagagagggaaaagaggaggaaagag
agacacgaaggcagcgctcccagcggattctctcgtttcccggcaacagaagaagactcg
gatgaagaggaagagtacgagaaagagtggaggaaacgaagtatgggcggagcagccatt
gcccctccttcgtcgctcgtggacagagagggctcgtctccttacgaagacgaaggtcgt
cccggcagaggcgccaaggccgccatccctcctcccatgtacgaggactcggaccggccg
cgctcgccgcccggccccaccagttcattcctagccaacatgggcggtacggtggcccat
aagatcatgcagaagtacggcttcaaagaaggccagggcctcggcaagcatgagcagggc
ctgagcacggcgctgtctgtggagaagaccagcaagaggggggggaagatcatcatcggg
gacgccgcggaaaaaccagggtcgagccagtcaggggcggctgatccttccagcggaggc
tctgcagcggactcttccaagaagtcggaggccaatcccttgacggagatcctgaaaaac
ccgaccaaagtggttctgctcaggaacatggtgggtcgaggagaagtggacgaagacttg
gagggggagacgaaagaagagtgcgagaaatacggcaaagttgtgaaatgtgtcattttt
gagatcgccgaagttacggatgatgaagccgtcaggatcttcctagagtttgagcgggtg
gagtcggccatcaaagccgttgtggatctaaatggacgttatttcgggggtcgagtcgtc
aaggcctgcttctacaatctagacaagtttcgtcttttggatctcggggagcaggtgtga
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