Xiphophorus hellerii (green swordtail): 116736865
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Entry
116736865 CDS
T07363
Name
(RefSeq) neuroepithelial cell-transforming gene 1 protein-like
KO
K20683
Rho guanine nucleotide exchange factor 3/8
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xhe04131
]
116736865
Membrane trafficking [BR:
xhe04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
116736865
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
PH_5
PH
PH_13
Motif
Other DBs
NCBI-GeneID:
116736865
NCBI-ProteinID:
XP_032445593
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Position
17:19239426..19245598
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AA seq
553 aa
AA seq
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MVAYDELGSLVPIKRTLQVTDCQNQANKESEEPSTKRVRPHGRVTSLASLISPVKNGAVR
RFGQTLQASFRGDGKSSAGPHKPCSKATAPTPPKRRNSTLWSETLDVRQKGTFSTQEIKR
QEAIFELSRGEHDLIEDLQLARKAYHDPMLKLSIMSEEELTHIFGNLDDYIPLHEDLLAR
LSKATGSDGTVGQIGQIVISWLPRLNAYKEYCSNQLAAKALLDQKKQDRRVQDFLQRCLE
SPFSRKLDLWSFLDIPRSRLVKYPLLLKEILRHTPPDHPDAGLLEEAITIIQGVLSDINM
KKGESECQYYIEKLEYLDDRQRDPRIEQCKSLLCHGELRNKSGTKLHVFLFTEILVLTRP
VTRNERQCFQVYRQPIPVQDLVLEDLQDGDVRMGGSFRGAFSNSEKAKNIFRVRSQDPSH
SQSHTLQVNDVFHKQQWLNCLRSAISVHRPTGEPSTASPHMSNVHSKRRMSSASAIIHLE
EPDENCPRQTSQSAPSSPCSSSTSGSTTSSLSSHSSSSLASPLSAPLFSSSSLKCKKDKR
SLGSLGKRKETMV
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggtggcttacgatgagctgggtagcttggtgcctatcaaacggactctgcaagtgaca
gactgccagaaccaagccaacaaagaatcagaggaacccagcaccaagcgtgtccgtcca
cacggcagggtgacgtcgctagccagcctcatctctccggttaaaaatggggccgtccgg
cgcttcggccagaccctccaggcctctttccggggtgatggcaagtcgtcggccgggccc
cacaagccttgcagcaaggcaacggcccccacaccgcccaaaagaaggaacagcaccttg
tggtcagagacgttggatgtccgccagaaaggaacgttttccacacaggagatcaagcgc
caggaggccatatttgagctgtctcgtggagaacacgacctgattgaggacctccaactt
gcacgcaaggcgtaccatgacccaatgctgaagctctccatcatgtctgaggaggagctc
acacacatctttggtaacctagacgactatatccccctgcatgaagacctgctggcccgg
ctctccaaagccacagggtctgatgggaccgtgggccaaattgggcagattgttatcagc
tggcttcccaggctcaacgcctacaaagagtactgcagcaaccagctggcagccaaggcc
ttgctagaccagaagaagcaggaccggcgggttcaggacttcctgcagcgctgcctggag
tctccgtttagccgaaagctggatttgtggagctttctcgacattccacgctctcgcctg
gtcaagtaccccctgctgctgaaggagatcctcaggcacactccaccagaccaccccgac
gccggcctcctggaggaagctatcacaatcatccaaggcgttctttccgacatcaacatg
aagaagggagagtccgagtgccagtactacatcgagaagctggagtatctggacgacagg
cagagagaccctcgcatcgaacagtgcaagagtctgttgtgtcacggggagctgcgcaac
aagagtggcacgaagctgcatgtgttcctgttcactgagattctggtcctgacccggccc
gtcaccaggaacgagcgacagtgcttccaagtgtaccggcagcccatcccagtgcaggac
ctggtgttggaggacctgcaggacggggacgtcaggatgggcggctctttcagaggagcc
ttcagtaactcagagaaagctaagaacattttccgcgtccgctcacaagacccgagccac
tcccagtcccacacgctacaggtcaacgatgtcttccacaagcagcagtggctcaactgc
ctccgcagcgccatctcagtccacaggcccacgggcgagccctccacagcgagtccacac
atgagtaacgtccactccaagcgccgcatgtcctccgcttccgccatcatccacctggag
gagccggatgagaactgtccacggcagacctctcagtccgcccccagctcgccatgcagc
agctccacgtccggctccacaacttcatcactttcctctcactcttcctcctctctggcc
tcgccgctgtcggcaccactcttctcttcatcatcactcaaatgcaaaaaggacaaaagg
tcactgggttccttggggaagagaaaggagacgatggtgtga
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