Xiphophorus hellerii (green swordtail): 116737025
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Entry
116737025 CDS
T07363
Symbol
eri1
Name
(RefSeq) 3'-5' exoribonuclease 1
KO
K18416
3'-5' exoribonuclease 1 [EC:3.1.-.-]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xhe03019
]
116737025 (eri1)
03036 Chromosome and associated proteins [BR:
xhe03036
]
116737025 (eri1)
Messenger RNA biogenesis [BR:
xhe03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
116737025 (eri1)
Chromosome and associated proteins [BR:
xhe03036
]
Eukaryotic type
Gene silencing
RNA interference (RNAi) pathway
Other RNAi proteins
116737025 (eri1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
SAP
Pox_D5
Motif
Other DBs
NCBI-GeneID:
116737025
NCBI-ProteinID:
XP_032445865
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All DBs
Position
17:complement(7873126..7878267)
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AA seq
339 aa
AA seq
DB search
MDEHKENIQRTDVNVKMSEEKEDEKTKPRSRICPDDETAPETSQSNRDFSHPVYKEIALA
NGHINRMSKDELRVKLAELKLDTRGVKDVMKKRLKNHYKKQKLLQSAAEGGPTDTYYDYI
CVVDFEATCEEDNPSDFLHEIIEFPMVLINTHTLQIVDTFQAYVKPEVNPQLSDFCVKLT
GITQETVDGADPFPDVLHRVVEWLQERELGTKYKYAMLTDGAWDMSKFLNIQCRISRIRY
PQFAKKWINIRKSYCNFYKVPRTQTKLSTMLEKLGMKYEGRPHCGLDDSHNIARIAVRML
QDGCQLRVNERMHGGQLLSVPSSAPVEGAPPPRNPGNRE
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggatgaacacaaggagaacattcaaagaacagacgtaaatgtgaaaatgtcagaggaa
aaggaagatgaaaagacgaaaccccgcagcagaatatgtcccgatgacgaaacagctcca
gagacgtctcagtccaacagagacttcagtcacccggtttacaaagagatcgctctggct
aacggccacatcaaccgcatgtccaaagacgagctgcgggtcaaactggcggagctgaag
ctcgacaccagaggcgtaaaggacgtgatgaagaagaggttgaagaaccactacaagaag
cagaagctgctgcagtcagccgcggagggagggcccaccgatacctactacgactacatc
tgcgtggtggactttgaggccacgtgcgaggaggataatccctcagacttcctgcatgag
atcatcgagttccccatggtcctcatcaacacgcacaccttacagatcgtggacactttt
caggcgtacgtgaaaccagaggtgaacccgcagctttccgacttctgcgtgaagctaaca
ggaatcacacaggagacggtggacggagcggatccgtttccagacgtccttcaccgagta
gtggaatggctgcaggagagggaactcgggacgaaatacaaatacgccatgctgaccgac
ggggcgtgggacatgagcaagttcctcaacatccagtgtcggatcagccggatccgatat
cctcagtttgcaaagaaatggataaatataagaaagtcttactgcaacttctacaaggtc
ccacgcacgcagacgaagctgagcaccatgttggagaagctcggcatgaaatacgaaggc
cggcctcactgcggcctggacgactcccacaacattgcccggatagccgtgcgcatgctg
caggacggctgccagctgcgcgtcaacgagcgcatgcacggcggccagctgctctcggtt
cccagctcggcgccggtggagggagcgccgccgccccgtaaccccggcaacagagagtag
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