Xiphophorus hellerii (green swordtail): 116737047
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Entry
116737047 CDS
T07363
Symbol
cbll1
Name
(RefSeq) E3 ubiquitin-protein ligase Hakai isoform X1
KO
K15685
E3 ubiquitin-protein ligase Hakai [EC:
2.3.2.27
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xhe03019
]
116737047 (cbll1)
04131 Membrane trafficking [BR:
xhe04131
]
116737047 (cbll1)
04121 Ubiquitin system [BR:
xhe04121
]
116737047 (cbll1)
Enzymes [BR:
xhe01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116737047 (cbll1)
Messenger RNA biogenesis [BR:
xhe03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
116737047 (cbll1)
Membrane trafficking [BR:
xhe04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
116737047 (cbll1)
Ubiquitin system [BR:
xhe04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
116737047 (cbll1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf_Hakai
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-RING_5
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
116737047
NCBI-ProteinID:
XP_032445889
LinkDB
All DBs
Position
17:complement(18807722..18812705)
Genome browser
AA seq
475 aa
AA seq
DB search
MDQGAENDLPGGDGSGSLSDLDVRRRIPIKLLSKPPLRSKPPPRIQRPGIRPCKPEPGED
DKFNFKQEERFDCCTKAGDVFGSQRRFPQPLFWDYKLNLIGERDGVPIHFCDKCGLPIQL
YGRMIPCKHVFCYDCALLHEKKGEKMCPGLNMYNCTEPVQRIEQCQRGSLFMCSIVSVCK
RTYLSQRDLQAHVNHRHMRASKSSRQDPVHLPPPDVPERFRVPPPHIPKSHVHLPAPLPP
YSQPPPPSPHDGPPPSPLGPETFRISTVTTRKHSNLITVPIHDDSSSRDPHPAGPGPGQP
PHHHPGDYPGQPPVVSHSHHMMAPPQHNFGPPPPPPPISHPMQHPAQASGTPHMVYSQAP
PPPMSAAPPPITPPPGHIMGQIPPYINHPPPGPPPQHSGPPVNAPPPHHYNPSSMQQFPE
DQGTLSPPFSQPGGLSPGMWPAPRGPPPRMQGPPPQGQMPGPHHPDQSRYRPYYQ
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggaccaaggcgcagaaaatgacctcccaggcggcgacggctcggggagtctgagtgac
ctggacgttcgcagacggattcccattaagctgctgtccaagccgcccctcaggagcaaa
cctccgccccgcatccagagacccggcatcaggccctgtaaacccgaacctggagaggac
gataaattcaacttcaagcaagaggagcgctttgactgttgcactaaagctggcgatgtg
ttcgggagtcagaggagatttccacagccgcttttttgggactataaattgaacttgatc
ggtgaaagagatggagtcccaattcacttctgtgacaaatgtggtctccccattcagctg
tacggacggatgattccctgtaagcatgtcttctgctatgactgcgctctgctgcacgag
aagaaaggagagaagatgtgtccagggctgaacatgtacaactgcacggagccggtgcag
cgcatcgagcagtgccagcgcggctcgctcttcatgtgcagcatcgtgtcggtatgtaag
cgcacctacctgtcccagcgtgacctgcaggcccacgtcaaccaccgccacatgagggcg
tccaagtcgtctcgccaggaccccgttcacctgccgccgcccgacgtgccggagcgcttc
cgcgtgccgccgccccacatcccgaagagccacgtccacctgccggcgccactgccgccc
tacagccagccaccaccacccagtccccacgacggcccaccgccgtccccgctggggccc
gagaccttccgtatctccacggtaaccacccgcaaacacagcaacctcatcacggtgccc
atccacgatgactcgtcgtcccgggacccccaccctgcggggcccggccccggccagccc
ccccaccaccaccccggggactaccccggtcagccacctgtggtgtcgcactcccaccac
atgatggcgccaccgcagcataactttggccctcctcctccccctccgcccatcagccat
cccatgcagcatcccgcccaggcctctggaaccccacacatggtttacagccaggccccc
ccacccccaatgtcagcagctcccccacccatcacccccccacctgggcacatcatgggc
cagatccccccttatatcaaccacccgcccccaggacctccaccgcagcacagcggaccc
cctgtgaacgcccccccaccacatcattataacccctcctccatgcagcagttccctgag
gaccagggcaccctgagcccccccttcagccagccggggggtctgagccccggcatgtgg
cccgcccccagagggccgccaccccggatgcaggggcccccgccccagggtcaaatgcca
gggccgcaccacccagaccagagccgctacaggccgtactaccagtaa
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