Xiphophorus hellerii (green swordtail): 116737053
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Entry
116737053 CDS
T07363
Symbol
pus7l
Name
(RefSeq) pseudouridylate synthase 7 homolog-like protein
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xhe03016
]
116737053 (pus7l)
Enzymes [BR:
xhe01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
116737053 (pus7l)
Transfer RNA biogenesis [BR:
xhe03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
116737053 (pus7l)
Prokaryotic type
116737053 (pus7l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
R3H_PUS7L
PUS7L_N
Motif
Other DBs
NCBI-GeneID:
116737053
NCBI-ProteinID:
XP_032445898
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Position
17:11626181..11631264
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AA seq
682 aa
AA seq
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MTESPVKVTMKGDEPVNVPAYFISKHEGFVGSIKTFIEDFVVTEIDINGQKVKTAQAVQT
AGCTSSEENQANTELKENLYCSGSQDADVSSDWGAGSDTPLPALGSFDLDVILGPSVSED
LEQFVMTLREKRPSGPELSLGSFSDKHQRANVHRAVRHRFPFLLTVTIQPEIRVREDPDY
RELARLVREEEAEDFFRFIDAKVRGSSYTFGPDDSKEHRTAVHHFLNRRFGKLVETKSFC
SQGRTSISVRLREHGKPKKRTAEERKEEDIYTAFTLCKENLETLEAISYMAATLGVLPSD
FTYAGIKDKRAVTYQSMVVKKVSPQRLKEKVAEFEKRGMRLSQIRSVNEPLKLGRLRGNH
FDLVVRKLRPHGASDGHLSGADGDTRLAALVKEAVENVKRRGFVNYYGPQRFGSGQSVLS
DRVGLALLKEDMVSAVRLFFSPEDSDDPHSLAKRHFLQTDNPKESLALMPLSKPRERLML
RALNRYGTGPDGCVQAWLSLPHSIRVFYPHAYCSRVWNDAAAHRLSAMGLGVRQGDLVWT
QTGQNRTEDAGEIISPQIHVVTREEEQAGVYTLEQVLLPMPGNSVKYPENAMRAWYQERL
AGDGLAESRFRVSSLKLNLPGCYRPLLAIPHNLSYQLHRAACSHGAKKQESDPGSLTLSL
NFDLDSSCYATICLREIMKCET
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgacggagtcaccagtaaaggtgacaatgaagggcgatgagcctgtaaatgttcctgca
tacttcatctcaaaacatgaaggcttcgttggaagcatcaaaaccttcattgaggacttt
gttgtcaccgagatcgacattaatggacagaaggtcaaaacagcacaagccgtgcagaca
gccggctgcacctcctcagaggaaaaccaggcaaacacagagttaaaggagaatctttac
tgttctggctcgcaagacgctgatgtctcatcagactggggggcgggttcagacacccca
cttcctgctttgggaagctttgatttagatgttattttaggcccgtctgtgagtgaagat
ctggagcagtttgtgatgaccctaagagaaaaacggccatccggtcctgagctctctctg
ggctccttctccgacaaacaccagagagccaacgtccaccgagccgtccggcaccgcttc
cccttcctcttgaccgtcaccatccagcccgagatcagggtgagggaagaccccgactac
agggagctggcccgactggtcagagaagaggaagcggaggacttcttcaggttcatcgat
gccaaggtgcgggggtcgtcttacacttttgggccggacgacagcaaggagcacaggact
gcagtgcaccactttctgaacaggaggttcgggaaactggtggagacaaaaagcttctgc
agccaaggaaggacgtcgatctcggtgagactgagagagcacggcaagccgaagaagagg
acagcggaagaacgcaaggaagaagacatttatactgctttcaccctgtgtaaggagaac
ctggagacactggaagccatcagctacatggcagctactctcggggtcctgccgtcagac
ttcacctacgccggcatcaaggacaaaagagccgtcacctaccagtccatggtggtcaag
aaggtctcgccacaacggttgaaagagaaagtagcagaatttgagaagagagggatgcgt
ctctctcagatccgctcggtcaacgagcccctgaagctgggacggctgcgggggaaccac
tttgacctggtggtccgcaaactcagaccacacggagcctccgacggacacctctctggc
gccgacggggacactcgcctggcggctctcgtgaaggaagccgtggagaacgtgaagagg
agaggttttgtcaactactatgggccacagcggtttggaagcggacaaagcgtcttgtca
gatcgagtaggattggctctgctgaaagaggatatggtcagcgctgtacgtctgttcttc
tctccagaggacagcgatgatcctcacagcctcgcgaagagacacttccttcaaacagat
aaccctaaggaatctttggcactcatgccgctgtccaagcccagggagaggctgatgctc
cgcgccctgaatcgctacggtaccggcccagatggttgtgtccaggcgtggctcagcctg
ccgcacagcataagggttttctatcctcacgcctactgtagcagggtgtggaacgacgcg
gcggcacacaggctctccgctatgggtctcggtgtcagacaaggagacctggtgtggacg
caaacaggacaaaacagaaccgaggacgccggagagatcatttctccccaaatccacgtg
gtgacgcgtgaagaggagcaagcgggagtttacacattagaacaagtgttattgccaatg
ccagggaactctgtaaaatatccagaaaacgcaatgagagcctggtaccaggagagactg
gcaggagacgggctggctgaaagccgcttcagagtcagcagcctcaaactgaacctgccg
ggctgctaccgccccctgctggccatcccacacaacctcagctaccagctgcacagagca
gcctgcagccacggcgcaaagaagcaggaatcggacccggggtctctcacactcagcttg
aactttgacctggactcctcctgttacgccaccatctgcctccgagagatcatgaagtgt
gagacttga
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