Xiphophorus hellerii (green swordtail): 116737239
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Entry
116737239 CDS
T07363
Symbol
pus7
Name
(RefSeq) pseudouridylate synthase 7 homolog isoform X1
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xhe03016
]
116737239 (pus7)
Enzymes [BR:
xhe01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
116737239 (pus7)
Transfer RNA biogenesis [BR:
xhe03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
116737239 (pus7)
Prokaryotic type
116737239 (pus7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
PUS7L_N
Motif
Other DBs
NCBI-GeneID:
116737239
NCBI-ProteinID:
XP_032446178
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Position
2:complement(25350274..25360278)
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AA seq
717 aa
AA seq
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MDGLWASMCFRGLSHTHVQFFFTTFRPPLNIDTNSVKLWVLKTFLRLPVRRKRRRVFQIH
RHSLLRLCKHSTLMAESEPVSDATPVGEKRTCLLHGDEETPAKKPKVDGENGNAPNPDGG
GGGGGEEEEEQPEGPASDGEEDGESFADMMKHGLTETDVGILKYVSDHEGFSGILKERYS
DFVVHEINKQGKMVHLDDLSIPADSEEGAEPEQQPNECDVLTEEQRQQLGELQLFKNKEG
NVSIEVKDDTKEKRTLVHKAIKTQFPGLETKTEEKEGHKFIVAYHAAGKKALAEVKTAAA
PRKHFWPKNRGSYCHFALYKENKDTMDAINVLSKFLRLRPNMFSYMGTKDKRAITVQEIA
VLKITAERLAHLNKCLMNLKLGNFCYKNHPLKLGELQGNHFTVVIRNISGTDEQVHQAMG
SLKQTGFINYYGMQRFGTTAVPTQQVGRAILRNDWNQVVDLILKPRPGAEKEYLVRCREE
WAKTQDPEAALKKLPNKRCVEGQLLRGLSMYGKKNIVTAFGLIPRNNRLMYVHSYQSVVW
NAMASRRIEAFGLKAVEGDLVLRGTTAHVLSAEEAESHSIHDIVMPLPGYDVIYPSHHIG
EGYRELLSADGLDLDNMRHKVKDYSLAGAYRRIIVRPTDVSWEVIHYDDPRISLVHSDFE
KLENKPAPVFNQDGKYRALRMEFSLPPSTYATMAIREVLKLDTSIKKQTQLNTVWFN
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atggacgggctttgggcttcgatgtgtttccggggtctttcacacacgcacgtgcagttt
ttctttaccactttccgtcctccgttgaacatcgacacaaacagcgtcaagctttgggtt
cttaagacgtttctgcgactgcctgttcggcggaagagaagaagagttttccagattcac
agacattccctgctccggctctgtaagcactcgactttgatggctgagtcagagcctgtg
tctgacgccaccccggtcggagagaagagaacctgtctgctgcacggggacgaagagacg
ccagccaaaaagccaaaagttgacggtgaaaacgggaacgctcccaacccagatggcggc
ggcggcggcggtggtgaggaggaggaggagcagccggaaggaccggcgagtgatggagag
gaggacggcgagagctttgctgacatgatgaagcacggcctgactgagacggatgtcggc
atcctgaagtacgtcagtgaccacgaagggttctctggaatcctcaaggaaaggtattct
gattttgtcgtgcacgaaatcaacaaacaaggaaagatggtgcatttagatgatctctcc
atcccagcagacagtgaggaaggagcggaacccgagcaacaaccgaatgagtgcgacgtg
ctgacggaggagcagagacagcagctcggtgagctgcagctcttcaagaacaaagaagga
aacgtctccatcgaggtaaaagacgatacgaaggagaaaagaacgctcgtccacaaagcc
atcaagactcagttccctggtctggaaacaaagaccgaagagaaagaaggtcataagttc
atagtggcctaccatgctgcagggaagaaggctttagcagaagtcaaaacagctgcagct
ccaaggaagcacttttggcccaaaaaccgcggcagttattgccactttgctctttacaag
gagaacaaagacaccatggatgccatcaatgtgctctcaaagttcctcaggcttagaccc
aacatgttctcctacatgggcaccaaggacaagagggccatcacagttcaggaaattgca
gttctcaagatcaccgcagagaggttggctcacctcaacaagtgcctcatgaacctgaag
ctcggcaacttctgctacaaaaaccaccctctgaagctcggggagctgcagggaaaccac
ttcactgtggtcatcaggaacatctcaggaacggacgagcaggtccatcaggccatgggg
tccctcaagcagaccggcttcatcaactactacgggatgcagcgcttcggcaccactgcc
gtgcccacgcagcaagtaggcagggccatcctgagaaacgactggaaccaagtggtggat
ttgattctcaaacctcgacctggagcagagaaagaatatctggttcgctgcagggaggag
tgggcgaagactcaggacccagaggctgcgctgaaaaagctgccaaacaagcgctgcgtg
gagggacagctgctccggggcctgtccatgtacggcaagaaaaacatcgtcaccgccttc
ggattgatcccccggaacaaccggctgatgtacgttcacagctaccagagcgtggtgtgg
aacgccatggcgagtcgcaggatcgaagccttcggcctgaaggcggtggagggcgatctg
gttctcagaggaaccacagcacacgtcctgagtgccgaggaggccgagagccactccatc
catgacatcgtgatgccgcttcctgggtatgatgtcatttacccctcccaccacatcggt
gagggatacagggagctgctctctgctgacggcctggacctggacaacatgaggcacaaa
gtgaaggactactccctggccggagcctacaggcgcatcatcgtcagacccactgatgtc
agctgggaggtgattcactatgacgacccccggatctctctggtgcacagcgattttgag
aagctggagaataaacctgctcctgtcttcaaccaagacgggaagtaccgggctctgcgg
atggagttctccctgcctccctcaacttacgctaccatggcgatccgggaggtcctcaag
ttggacaccagcatcaagaaacagacgcagctcaacaccgtttggtttaactga
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