Xiphophorus hellerii (green swordtail): 116737363
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Entry
116737363 CDS
T07363
Name
(RefSeq) clathrin heavy chain 1 isoform X1
KO
K04646
clathrin heavy chain
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04142
Lysosome
xhe04144
Endocytosis
xhe05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116737363
04142 Lysosome
116737363
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
116737363
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xhe04131
]
116737363
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xhe04147
]
116737363
Membrane trafficking [BR:
xhe04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
116737363
Exosome [BR:
xhe04147
]
Exosomal proteins
Proteins found in most exosomes
116737363
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
TPR_1
Motif
Other DBs
NCBI-GeneID:
116737363
NCBI-ProteinID:
XP_032446332
LinkDB
All DBs
Position
18:15935271..15957711
Genome browser
AA seq
1685 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICVREKVGEQAQVVIIDMADPNN
PIRRPISADSAIMNPASKVIALKDAAKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTV
ALVTDNAVYHWSMEGDSQPIKVFDRHSSLAGCQIINYRTDAKQKWLLLIGISAQQNRVVG
AMQLYSVDRKVSQPIEGHAAGFAQFKMEGNTEESTLFCFAVRGQAGGKLHIIEVGTPPSG
NQPFPKKAVDVFFPPEAQNDFPVAMQISSKQDVVFLITKYGYIHLYDLETGTCIYMNRIS
GETIFVTAPHEPTAGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAG
AEELFARKFNTLFAAGNYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFG
ILLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVY
LRANVPNKVIQCFAETGQFQKIVLYAKKVGYTPDWIFLLRNVMRISPEQGLQFSQMLVQD
EEPLADITQIVDVFMEYNLIQQCTSFLLDALKNNRPMEGPLQTRLLEMNLVHAPQVADAI
LGNQMFTHYDRAHVAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLS
VEDSLECLRAMLSANIRQNLQICVQVASKYHEQLSTQSLTELFESFKSFEGLFYFLGSIV
NFSQDPEVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCD
RFDFVHDLVLYLYRNSLQKYIEIYVQKVNPSRLPVVIGGLLDVDCAEDVIKNLIMVVRGQ
FSTDELVAEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLKENPF
YDSRVVGKYCEKRDPHLACVAYERGQCDQELIHVCNENSLFKSLSRYLVRRKNPELWASV
LLETNNYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFS
EHRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFRKFDVNT
SAVQVLIEHIGNLDRAYEFAERCNEPPVWSQLAKAQLQKGMVKEAIDSYIKADDPSAYME
VGQAAAQSGNWEDLVKFLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQ
QVGDRCYDDKMYEAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFA
CVDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTE
LAILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMM
NHPADAWKEGQFKDIVTKVANVELYYKAIQFYLEFKPLLLNDLLIVLSPRLDHTRAVNFF
SKMKQLPLVKTYLRSVQNHNNKAVNEALNNLFINEEDYAALRTSIDAYDNFDNISLAQSL
EKHELIEFRRIAAYLFKGNNRWKQSVELCKKDKLYKDAMQYASESKDTELAEELLAWFLN
EDKKECFAACLFTCYDLLRPDVVLETAWRHNIMDFSMPYFIQVMREYLSKVDAIKEKVDK
LEASESLRKQEEQATESQPIVYGTPQLMLTAGPNMAVPPQQAYGYGYTGAPAYGQPPQPS
FGYGM
NT seq
5058 nt
NT seq
+upstream
nt +downstream
nt
atggctcaaatcctgcctattcgcttccaggagcacctgcagctccagaacttggggatc
aacccagccaacattggcttcagcactctcaccatggagtctgacaagttcatctgcgtg
agggagaaagtgggtgagcaggcccaggttgtcatcattgacatggccgatcctaacaac
cccatccgccggcccatctctgctgacagcgccatcatgaatcctgccagcaaagttatc
gcacttaaagacgctgcaaagaccctgcagatctttaacattgagatgaaaagcaagatg
aaggctcacaccatgacagacgatgtgactttctggaagtggatctctctcaacaccgtt
gccctggtcacagacaacgccgtgtaccactggagcatggaaggcgattctcaaccaatc
aaagtgtttgaccgtcactcgagcctggcaggctgccagatcatcaactaccgtactgat
gccaaacagaagtggttgctcctcattggtatctcagctcagcaaaaccgtgttgttggt
gccatgcagttgtactctgtggacaggaaagtctcccagcctattgaaggccatgctgct
ggctttgcacaatttaagatggagggcaacaccgaagaatcaactctattctgctttgct
gtgcgggggcaagcaggaggaaaacttcatattattgaagttggaaccccgccaagtgga
aaccaaccattccccaaaaaagccgtggatgttttctttcctccggaagcccagaatgac
ttccctgttgctatgcagatcagctccaagcaagatgtcgtttttctcatcacaaagtat
ggctacatccacctgtatgatctggagaccggaacttgcatctacatgaaccggatcagc
ggggagaccattttcgtcactgccccacatgaacccactgctgggatcattggagttaac
aggaaaggacaggtactttcggtgtgtgtggaggaggaaaatataattccctacatcacc
aacgtgctccagaacccagacctggctctacgcatggctgtacgcaacaaccttgctggt
gctgaggaactatttgctcgcaagtttaacaccctgtttgctgcaggaaattactcagaa
gcagccaaggtggcagccaatgctcctaagggcatcctgcggactccagataccattcgg
aggttccaaagtgttccagcacaaccgggccagacttctcctttgctccagtactttggc
atcctgctggaccaaggccagctcaataagtttgagtctctggagctctgcaggcctgtt
cttcagcagggccgcaagcagctactggagaaatggctgaaggaggataagctggaatgt
tctgaggagctcggagacctggtgaagtctgttgatcccactctggccctcagtgtgtat
ctcagagcaaacgtccccaataaagtcattcagtgctttgcagagactggacagtttcag
aagattgttctttatgccaagaaggtgggctacacaccagactggatcttcttgttgagg
aacgttatgcggatcagtccagagcaaggtctccagttctcccagatgctggtgcaggat
gaggaacctcttgctgatattacacagattgttgacgtatttatggagtacaacctgatc
cagcagtgcacctcattcttactagatgctctaaaaaacaacagacccatggaaggacca
ctgcagacacgtttactggaaatgaacttggttcatgctccacaggtggcagacgccatc
cttggcaatcagatgttcacccactatgaccgcgcccatgtggcacagctgtgtgagaag
gctggcctcctgcagagggcactggagcattacacagacctgtatgacataaagcgagcc
gtggtgcacacacaccttctcaacccagagtggttggtgaatttcttcggctccctctca
gtggaggactccttggagtgtctgagagccatgctgtcagccaacatccgccagaacctg
cagatctgtgtgcaggtggcttcaaaataccatgaacagctcagtactcagtccctcact
gagctgtttgagtcattcaagagctttgaaggattattctacttcctgggttctatagtg
aactttagtcaagatccagaggtccacttcaaatatattcaagctgcctgcaaaaccggc
cagattaaagaggtggagagaatctgtcgagagagtaactgctatgacccggaacgggtg
aagaacttcctgaaggaggccaaacttactgaccagcttcctttaatcattgtatgtgac
cgctttgattttgtccatgacctggtcctctacctgtatcgcaacagccttcagaaatac
atcgagatctacgttcagaaggtgaacccaagtcgtctgccggtggtcatcggaggtttg
ttggacgtggactgtgctgaggatgtgattaagaacctgatcatggtggttagggggcag
ttttccacagatgaacttgttgctgaagtagagaaaagaaatcgtctgaagttgctgctg
ccctggttggaggctcgtatccatgaaggctgcgaggaacctgctacccacaatgctttg
gccaaaatatacatcgacagcaacaacaaccctgagcgctttctaaaggagaaccctttt
tacgacagccgtgttgtgggcaaatactgcgagaaaagagacccccacctggcctgcgtg
gcttacgagagaggacagtgtgaccaagaactcattcatgtgtgcaatgaaaactcgctg
ttcaagagtctgtcccgctaccttgtacgacgcaagaaccctgagctgtgggcgagtgtc
ctcctggagaccaacaactacagaagaccccttattgaccaggtggtccagacagcatta
tcagagactcaggatccagaggaagtatccgtcacagtgaaggctttcatgacggccgac
ctgcccaatgaactcattgagctgctggaaaagattgtgctggacaattctgtcttcagt
gagcacagaaacctgcagaacctgctcattctgacggccattaaagctgacagaactcgt
gttatggagtacattaatcgccttgacaactacgatgccccagacatagcaaatattgcc
atcagcaacgagctgtttgaggaggcctttgcaattttcaggaagtttgacgtcaacacc
tctgctgttcaggttctgattgagcacatcggaaacttagacagagcatatgaatttgcc
gagcgttgcaatgagcctccagtgtggagtcagctggccaaggcccagttgcagaaggga
atggtcaaggaagccatcgactcctacatcaaggctgacgacccgtctgcttacatggag
gtgggacaggctgcagcccaaagtggaaactgggaggatctggtaaagttcttgcagatg
gctcgtaagaaggctcgggagtcgtatgttgagacggagctgatctttgctttggccaaa
accaatcgtctggcagagctggaagagttcatcaacggtcccaacaacgctcacattcag
caagtgggcgatcgttgttatgacgacaagatgtacgaagcggccaagctgctttacaac
aacgtctccaactttggccgtctggcctccacgttggtgcatttgggagaataccaggca
gccgtagatggagcgcgcaaagccaacagcacccgcacctggaaggaggtgtgttttgcc
tgtgtagatgggaaggagttccgtcttgcccagatgtgcggtctgcacatcgtcgtccat
gccgacgagctggaggaactaatcaactactaccaggaccgcggttactttgaggagctg
atcaccatgcttgaagccgctctgggtctggaacgcgcccacatgggaatgttcactgag
ctggccatcctctattccaagtttaagccacagaaaatgagggaacacctggagctcttc
tggtcccgcgtcaacattcctaaagttctcagggcagctgagcaggcccacctctgggct
gagctggtgttcctctatgacaagtatgaggaatatgacaacgccatcatcaccatgatg
aaccatccagctgacgcctggaaggagggtcaattcaaagatattgtcaccaaggtggcg
aatgtggagctgtactacaaggccatccagttttatctggagttcaagccgttgttactg
aacgacctgctcatcgtgctctctccccggttggaccacacccgggccgtgaacttcttc
agcaagatgaagcagctgcctctcgttaaaacgtacctgcggtcggtccagaatcacaac
aacaaggcagtaaatgaggcactcaacaacctcttcattaatgaggaagactacgcggct
ttgcgaacatccattgacgcgtatgataacttcgacaacatctcactggctcagagcctg
gagaagcacgaactgatcgaattcaggaggattgctgcttatcttttcaagggcaacaac
cgctggaagcagagcgtcgagctctgcaagaaggacaagctctacaaggacgccatgcag
tatgcatcagagtccaaagacacggagctggccgaggagcttctggcctggttcctgaac
gaagacaaaaaggagtgtttcgccgcctgcctgttcacttgctacgacctgctgaggcca
gacgtggtgctggaaaccgcctggcgacacaacatcatggacttctccatgccatacttc
atccaggtcatgagggagtatctatctaaggttgatgcaataaaggaaaaggtggacaaa
ctcgaagcctctgagtctctgaggaaacaggaggagcaggccacggaatctcaacccatt
gtttacggcacaccgcagctgatgctaacagcagggcccaacatggccgtgcctcctcag
caggcgtatggctacggctacacgggggcaccagcctacggccagccaccacagcccagc
tttggttacggcatgtga
DBGET
integrated database retrieval system
