Xiphophorus hellerii (green swordtail): 116737384
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Entry
116737384 CDS
T07363
Symbol
farsb
Name
(RefSeq) phenylalanine--tRNA ligase beta subunit
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
116737384 (farsb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
xhe01007
]
116737384 (farsb)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xhe03016
]
116737384 (farsb)
Enzymes [BR:
xhe01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
116737384 (farsb)
Amino acid related enzymes [BR:
xhe01007
]
Aminoacyl-tRNA synthetase
Class II (U)
116737384 (farsb)
Transfer RNA biogenesis [BR:
xhe03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
116737384 (farsb)
Prokaryotic type
116737384 (farsb)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_synthFbeta
EF1_GNE
PhetRS_B1
B5
EF-1_beta_acid
B3_4
Arc1p_N_like
EAD7
Motif
Other DBs
NCBI-GeneID:
116737384
NCBI-ProteinID:
XP_032446389
LinkDB
All DBs
Position
18:complement(10999438..11012352)
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AA seq
847 aa
AA seq
DB search
MPTVGVKRDFLFKALGRTYTDEEFDELCFEFGLELDEITSEREIISKEQGDSKASDASDV
ILYKIDVPANRYDLLCLEGLVRGLQVFKNKLEAPRYRRLSPDSGEPQRLIITKETAAVRP
HAVAAVLRNITFTQERYDSFIELQEKLHQNICRKRSLVAIGTHDLDTISGPFTYTAKAPG
DICFRPLNQTKEYTATQLMSLYKTDSHLKHYLPIIEDKPVYPVIYDSNGIVLSMPPIING
DHSKISLKTKNVFIECTATDLTKGKIVLDMIVTMFSEYCAQPFTVEQAEVVYPDGKTCIY
PELAYRKEKLSGEFINKKVGIRESTERIAQLLTRMCLLSQPTGVGDEIEVEIPPTRPDVI
HACDIMEDAAIAYGFNKITRTTPSTYTIATQFPLNKLTELLRQDLAAAGFTEAFTFALCS
QEDIADKLGKKISETRAIHISNPKTAEFQVARTTLLPGLLKTIAANKKMPLPLKLFEISD
VVLKDESKDVGARNSRRFCAIYYNKTPGFEVIHGLLDRTMQLLEMKAARGEGYHIQAADD
STFFPGRCAEIFARGTSVGRLGVLHPDVISRFDLTMPCSALEMDLEPFLGHTAEILLTHD
VPMQETFKHPFPAPSQSQPTLPSRLPSTKTVFGDLSSRAGLKALNDFLTDRSYIEGFTVS
QADAAVFDAIPSPPSQAFCHLRRWYCHIKSFQTERARLPSARSQFVLPPTSPASPNNTSE
DDMNLFGSDDDEESAEAARIREQRLSEYAAKKSKKPALVAKSSILLDVKPWDDETDMAKM
EECVRSVTMEGLLWGQSKLVPVGYGIKKLQIGCVVEDDKVGTDLLEEAITAFEEYVQSVD
VAAFNKI
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atgccgactgtcggagttaaaagagactttctctttaaagctttgggcagaacatacact
gatgaggagtttgacgagttatgctttgagtttgggctggagttggatgaaattacctca
gaaagggagataatcagcaaggagcagggcgactctaaagcttcagacgcatccgatgtt
attctgtataagatcgacgtgccagctaaccgctacgacctgctgtgtctggaggggctt
gtccgtggtctacaggtcttcaagaataagctcgaggcgcctcgatacagacgcttgagt
ccagacagtggggagcctcagaggttgatcatcactaaagagacagcagcagtgcgaccc
catgctgtggcagcagtgttgaggaacatcactttcactcaggagcgctatgacagtttc
attgagctgcaggagaagctacatcagaacatctgcagaaagaggagcctggttgccatt
ggcacccatgacctggacaccatctcaggtccgttcacctacacagccaaagctcccgga
gacatctgcttcagaccgctaaaccagaccaaagagtacacggctactcagctcatgagc
ctctacaagacagacagtcacttgaaacattatctccctattattgaagacaagcctgtg
tatccagtcatctatgacagcaacggcattgtactgtcaatgcctcctataatcaacggg
gaccattcaaaaatcagtttaaagacgaagaacgtctttatcgagtgcacagcaaccgat
cttactaagggaaagatcgtgttggacatgatcgtgaccatgttcagcgagtattgtgct
cagcctttcacggtggagcaggctgaagtggtgtacccagatggaaagacctgcatatac
cctgaactggcttacaggaaggagaagctgtctggcgagttcatcaacaaaaaagttggc
attagggaatcaacggagagaattgctcagctcctgacccggatgtgcctcctctcccaa
cccaccggcgtcggtgatgagattgaggtggagatcccccccacccgtccagacgtcatc
cacgcctgtgacatcatggaggacgccgccatcgcctacgggtttaacaaaatcacccgc
acgacgccaagcacctacaccatagccacccagtttcctctcaataaactgacagagctg
ctgagacaagacctggcagctgctggattcacagaggctttcacctttgctctgtgttct
caagaagatatagcagacaagcttggaaaaaagatctctgagacccgagctattcacatt
tccaaccccaagactgcagagttccaggtggcacgcaccactttacttcctggcctgctg
aaaacgatagctgccaacaagaagatgccccttcctctcaaactatttgagatatctgat
gtggtgctgaaggatgagagcaaagatgttggggcaaggaacagtcggcgtttctgtgcc
atttattacaacaagactccaggctttgaggtgatccacggcctgctggaccgaaccatg
cagctgctggagatgaaagcagctcgtggagagggataccacatccaggctgcagacgat
tccaccttcttcccgggtcgctgtgctgagatctttgcccgtgggacgagtgtagggcgt
ctcggagtccttcaccccgacgtcataagccgcttcgatctgaccatgccctgctctgct
ttggagatggacctcgaacctttccttggccacactgctgaaatcctcctcacacatgac
gttcccatgcaggaaaccttcaagcacccgtttccagctcccagccaatcccagccaact
ctgccatctcgcctgccttcaactaaaacggtgtttggcgatttgagctcacgggcaggc
ctcaaggcgcttaatgatttcctgacagacagaagctacatagagggtttcacggtgtcc
caagctgacgccgcagtgttcgatgccatcccttctccgccctcgcaggctttctgccac
ctccggcgctggtactgccacatcaagtccttccagacggagagagcgcggctcccgtca
gccaggagtcagtttgttctcccacccacttcgcctgcctccccaaacaacacaagcgaa
gatgacatgaaccttttcggttccgatgacgacgaagagagcgcagaggcagctcggatc
cgagagcagcgcctgtccgagtatgccgccaagaagtctaagaagccggcgcttgtcgcc
aagtcctccatcctccttgatgttaagccgtgggatgacgagacggacatggccaagatg
gaagagtgcgtccgtagcgtcactatggagggcctgctgtgggggcagtccaagctggtg
ccagtgggctacgggatcaagaagctgcagatagggtgcgtagtggaggacgataaagtg
ggcacggatctgctggaggaagccatcactgctttcgaggaatacgttcaatctgtggat
gtggctgccttcaataagatctga
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