Xiphophorus hellerii (green swordtail): 116737422
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Entry
116737422 CDS
T07363
Symbol
siah1
Name
(RefSeq) E3 ubiquitin-protein ligase SIAH1 isoform X1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04115
p53 signaling pathway
xhe04120
Ubiquitin mediated proteolysis
xhe04137
Mitophagy - animal
xhe04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
116737422 (siah1)
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
116737422 (siah1)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
116737422 (siah1)
09143 Cell growth and death
04115 p53 signaling pathway
116737422 (siah1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xhe04121
]
116737422 (siah1)
Enzymes [BR:
xhe01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116737422 (siah1)
Ubiquitin system [BR:
xhe04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
116737422 (siah1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
Trm112p
Motif
Other DBs
NCBI-GeneID:
116737422
NCBI-ProteinID:
XP_032446432
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Position
2:complement(4482042..4512569)
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AA seq
286 aa
AA seq
DB search
MDEEMSRQTATALPTGTSKCPPSQRVPTLSGTTASNSDLASLFECPVCFDYVLPPILQCQ
SGHLVCSNCRPKLTCCPTCRGPLGSIRNLAMEKVANSVLFPCKYASSGCEVTLPHTDKTE
HEELCEFRPYSCPCPGASCKWQGSLDAVMPHLMHQHKSITTLQGEDIVFLATDINLPGAV
DWVMMQSCFGFHFMLVLEKQEKYDGHQQFFAIVQLIGTRKQAENFAYRLELNGHRRRLTW
EATPRSIHEGIATAIMNSDCLVFDTSIAQLFAENGNLGINVTISMC
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagaaatgagtcgccagaccgccaccgcgctgcccacaggaacctccaagtgc
ccgccgtctcagcgcgtgcccaccctgtcaggcaccaccgcctccaacagcgacctggcc
agcctgttcgagtgtcccgtctgcttcgactatgtgctgccccccatcctgcagtgtcag
tccggacacctggtgtgttccaactgccggcccaagctcacctgctgtcccacctgcagg
ggcccgctgggctccatcaggaacctggccatggagaaggtggccaactccgtcctgttc
ccctgcaagtacgcgtcgtcgggctgcgaggtcacgctgccgcacaccgacaagacggag
cacgaggagctgtgcgagttccggccgtactcctgcccctgtcccggcgcctcctgcaag
tggcaggggtcgctggacgccgtcatgccgcacctgatgcatcagcacaagtccatcacc
acgctgcagggcgaggacatcgtgttcctggcgacggacatcaacctcccgggcgcggtg
gactgggtcatgatgcagtcctgctttggcttccacttcatgctggtcctggagaagcag
gagaagtacgacggccaccagcagttcttcgctatcgtgcagctcatcgggacgcgcaag
caggccgagaacttcgcctaccggctggagctgaacggccaccggcgccggctcacctgg
gaggccacgccccgctccatccacgagggcatcgccaccgccatcatgaacagcgactgc
ctggtgttcgacacgtcgatcgcgcagctgttcgccgagaacggaaacctgggcatcaac
gtcaccatctccatgtgctga
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