Xiphophorus hellerii (green swordtail): 116737501
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Entry
116737501 CDS
T07363
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 2-like
KO
K05046
solute carrier family 6 (neurotransmitter transporter, GABA) member 13
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
116737501
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xhe02000
]
116737501
Transporters [BR:
xhe02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
116737501
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
116737501
NCBI-ProteinID:
XP_032446570
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Position
2:26132464..26152866
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AA seq
620 aa
AA seq
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MKGEKRDAENTSKAEPSNGHGRLVDIVPSTEEKMMDRGQWGNKVEFVLSVAGEIIGLGNV
WRFPYLCYKNGGGAFFIPYLIFLFACGIPVFLLETSLGQYTSEGGITCWRKICPLFEGVG
YATQVIVALLNIYYIVVLAWAIFFLFNSFTWDLPWASCNNTWNTDSCMAFQRGNGSVNHH
ENATSPVIEFWERRVLRISSGIDHIGALNWDLVACLAVAWVICYFCIWKGVKSTGKVVYF
TATFPYIMLLVLLIRGVTLPGALRGIHYYLYPDLERLSDPQVWMDAGTQIFFSYAICLGC
LTALGSYNKYNNNCYRDCVCLCFLNSGTSFLAGFAIFSILGFMSFEQNVPISEVAESGPG
LAFIAYPRAVTMMPVSPLWACCFFVMIVFLGLDSQFVCVESLVTAMVDMYPSVFRRKNRR
ELFILAVAVVSFLLGLIMLTEGGMYVFQLFDYYAASGMCLLFVAIFETVCIAWVYGADRY
YDNIEDMIGYRPGPVIKFCWLFFTPATCFGTFAFALIKYSPLKYNNEYVYPVWGDGIGWV
LALSSMLCIPLWAAGKLYYTPGTLKERLILLTTPSTDLPTTKQQQGRLMGVQPGDGDKPQ
QKTPSTRDGYFPVDEKESHC
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggtgaaaaacgagatgcagaaaacacgtccaaggcggagccgtccaacggtcat
ggcaggctggtggacatcgtccccagcaccgaggagaagatgatggacaggggccagtgg
ggcaacaaggtcgagtttgtcctatctgtcgccggggaaattatcggcctgggcaacgtc
tggcgtttcccctacctttgctacaagaacggaggaggggctttttttattccatacctc
atcttcctgtttgcttgtggcatccccgtgttcctcctggagacttctttgggacagtac
accagtgagggcggcatcacttgctggcggaaaatttgcccgttgtttgaaggagtgggt
tatgccacccaggtgattgtcgctctcctgaacatctactacattgttgtgctggcctgg
gccatattctttctcttcaactccttcacctgggatcttccctgggcgtcttgcaacaac
acatggaacacagattcctgcatggcatttcagaggggaaacggctccgtcaatcaccat
gagaacgccacctctcccgtcattgagttttgggagcgtagagtcctgagaatttcctct
ggcattgaccacattggcgcgttaaactgggatctggtcgcctgcttggccgtcgcgtgg
gtcatctgctacttctgcatctggaagggagtcaaatcaactgggaaggtggtttacttc
acggctactttcccgtacatcatgctgttggtcctgctgatcagaggagtcactttgccc
ggagccttgaggggaatccactattacctttaccccgatttggaacgactgtctgacccc
caggtctggatggatgctggaacgcagatatttttctcatatgccatctgcctgggctgc
cttacagccttaggaagctacaacaaatacaacaacaactgctacagggactgcgtgtgt
ctctgtttcctgaacagcggcacaagttttctcgccggctttgccatcttctccattttg
ggtttcatgtccttcgagcaaaacgtgccgatctcagaagtggccgaatctggtcccggt
ttggccttcatagcatatcctcgcgctgtcaccatgatgcctgtttcccctctctgggcc
tgctgtttcttcgtaatgattgtgttcctgggactggacagtcagttcgtgtgcgtggag
agcttggtgacagcaatggtggacatgtatccctccgtcttccgccgcaaaaaccgcagg
gagctcttcatcctggcagtagctgtggtgtccttccttttgggactcatcatgctgaca
gagggaggcatgtacgtcttccagctgtttgactactacgcagccagcgggatgtgcctt
cttttcgtggctatttttgagactgtctgcattgcctgggtttatggtgctgatcgttac
tatgacaacatagaggatatgatcgggtaccgtcccggccccgtcattaaattctgctgg
ctcttctttaccccagcaacgtgctttggaacctttgcctttgccttgatcaagtactca
cctctgaagtacaacaatgaatacgtgtacccagtatggggggacgggattggctgggtt
ctggctctgtcctccatgctctgcatccctctgtgggcggcagggaaactctactatact
ccaggaacgcttaaagaacgcctcattcttctcaccactccttccactgacttaccaacg
acgaagcaacaacaagggaggctgatgggcgtccaacctggagacggcgacaaaccccag
cagaaaactccttccaccagagatggctacttccctgtagacgaaaaagagtctcactgc
tag
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