Xiphophorus hellerii (green swordtail): 116737517
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Entry
116737517 CDS
T07363
Name
(RefSeq) latent-transforming growth factor beta-binding protein 1-like isoform X1
KO
K08023
latent transforming growth factor beta binding protein 2/3/4
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
xhe04990
]
116737517
Domain-containing proteins not elsewhere classified [BR:
xhe04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
116737517
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
EGF
hEGF
FXa_inhibition
EGF_3
Plasmod_Pvs28
EGF_Teneurin
Gigasin_N
EGF_2
EGF_TEN
Motif
Other DBs
NCBI-GeneID:
116737517
NCBI-ProteinID:
XP_032446596
LinkDB
All DBs
Position
18:complement(1340777..1381640)
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AA seq
1792 aa
AA seq
DB search
MRLGLLCLWTGWMLRSAASQPPQPEDGGVRPGEQLQTDPERVRTGFRSQSTGQPAGGARR
RAALSGPRVCGGRCCLGWTVSPKTRRCTKPRCFPSCRNGSSCGLPNNCLCGKGFYGVRCQ
FSKVPLPVGRPPETSSHPASTTTAAGPIGSSRKPEPTGSFQKPLNGNDSGPLKSGCLAGQ
AEGVKGDPGDVTLRFLNRTSPGSTDLMRTDPDPERQSSDSEHVLESKPQTNRENRNPLRS
ESLELQASLEVKEDEDPTGAERRPEEMKRQIPSLREAQSVLLRNSLLQGGRGGNMAALLM
KHITREKRKLHTLTSSSSSSSSSLSTMRAFQNQRGRFDSHLAAPKVLCPLLCKNGGVCLQ
MDRCLCPANFTGKFCQIPVPLPGAASTNEIVQPPLPSSAAANQELMRSEFLLPLGQNRAA
PPSADPRMVKVRVQHPKEASVKIHQVMKVSGSSPALRTLSSSSSGSAGAPAQAPLPAGGA
RIQAQTLRGGGTYNPQSGFKYCFREVKDGQCSSPLPGLRSREVCCRGIGKAWGLTDCSLC
PEAPGQRNSSCPVGFERTNGTQCVDVNECLQPGLCENGICVNTRGSYSCVCRLGFILDAT
HGICISQSVISEEKGQCYRVLGSSRGPYTCSLPIVRNITKQICCCSRVGKAWGPDCVRCP
YFGSVAFKEICPAGPGYHYSASTLQISQRVDGDSTGREFLLTALDASDPVPRSSGVIAFG
SQQRPSSSGSPSGTRTGPVQVQVPAQLDLTASSRPTPPAGSATRNAQTRLEVQHGRSDIQ
NIRLDLALARPQPPLAFPSSVLRPDPAPVPADSLPTPAPPRTSERGSRPGPEPPGPERRP
AANPTNRPARVQPVRGVCQIRPGVCERGRCVDLPGGKHTCECDEGFQPNAQQSRCFDVDE
CQQNPCSNGRCENSPGSFRCVCYHGYRLAGNTCEDVDECVDPLQCPGQECVNMPGSYRCS
PCQPGLGLLNGICTDIDECRLSPCSGGRCENTPGSFRCVCRHGYRLQNKTCTDVDECAEP
SQCPGQMCVNSVGSYRCVSCRPGYTLTNRQCTDVDECASAGACDAEQVCVNSVGSFRCDC
RPGYRSSGLGRRCTDVNECLEGDFCFSRGECVNTPGSYTCVCSPGFTLSENRTACLDVDE
CVRPGVCSDGRCVNTDGSFLCQCNSGFSANPEQTACLDVDECVSSGGSVCPSRRCENIIG
SFRCLAACQAGQRVAADGSCVGPAVSAPASAAAATTFSLPAAPRLPSSVSESGSRPESTH
SSSSSSSSSSSSSSGVQISAVDVSAVLHRQSAAQPGDLRDCYYNLGAGGCSLLAANTSQQ
ECCCTAGEGWGRGCRAHACPAPNTADFLSLCPSGWGYVTVGSSAFSYSDVDECKRFQPEV
CKNGVCVNNIPGYRCYCSSGFVYSSALLECIDYDECEEESCVGGECVNTVGSFYCSCPPP
LVVDDTQSNCVNASHLTRDENLSVCWQHVSADLLCQSPLLGAQVTFIDCCCFYGEGWGMG
CALCPRTDSEEYASLCSSYSAAAFPGSFPDSGRPETGPGRGAAPYGPEFFPAAPLSDVDF
SQDYIDYSLAGRSRSDFRARPPVSFSPPDDAYGGSEFSPGFYPDGDYGSPDGSAPRTPTF
RLPPDPRSDIAFVPRPLPPSRSDPPPLSLAPRPGSPYGDREEGGDFRGWRPGAGLPPFTD
RGGGEGSGPRRVYERRYETHASLSATEDCGILHGCENGQCIRVAEGYTCDCYVGFELDLT
SMSCIDINECEDAAALPFPCVNARCVNTEGSFRCVCRRGYVMSRRRNHCIAA
NT seq
5379 nt
NT seq
+upstream
nt +downstream
nt
atgcggctggggctcctgtgtctgtggaccggctggatgctccggagcgccgcgtcgcag
cctcctcagccggaggacggaggcgtgcgacccggcgaacagctgcagaccgacccggag
agagtccggaccgggttccggagccagagcaccggacaaccggcaggtggagcccggagg
agagcagctctgagcggacctcgtgtttgtggaggtcgatgttgtctcggctggactgtg
tcccctaaaaccaggaggtgcaccaagcccagatgttttccttcctgccgtaacggatca
tcgtgtggacttcccaacaactgtctgtgcgggaaaggtttctatggcgtccgctgccaa
ttttccaaagttcctcttcctgtgggaaggcctccagagacatccagccatcctgcctcc
acaaccacagcagctggaccaatcgggtccagtcggaaacctgaacctacaggttcgttt
cagaagccattaaacggtaacgactctggtcctctgaagtctggatgtctagcaggtcaa
gctgaaggcgtgaagggggatccaggagatgttaccctaaggtttctgaaccgaacgtct
cccggaagcacagatctgatgaggacagatccagatccagagaggcaaagctcagattca
gaacatgtcctagagtccaagccccaaactaacagagaaaacaggaacccactgagatcc
gagtccctggagctgcaagcaagtctggaagttaaagaggacgaggatccgactggagca
gagaggaggccagaggagatgaagaggcagatcccgagtctgagggaggcccagtccgtt
ctgctgagaaactccttattacaaggaggaagaggaggcaacatggccgccctgctgatg
aagcacataacaagagagaagaggaagctacacacactgacttcttcatcctcctcttcc
tcctcctcactatccaccatgagggccttccagaaccagagaggtcggttcgactcccac
ctcgctgctcctaaagtcctctgcccgctgctctgtaagaatggcggcgtctgcctgcag
atggaccgctgcctctgccccgctaatttcaccgggaagttctgccagatccccgtcccg
ctccccggcgccgcctccaccaatgagatcgtccagccgccgctgccctcctccgcggca
gccaatcaggagctgatgcggtcggagttcctgctgccgctcggccagaaccgggcggcg
ccgccgtccgcagacccccgcatggtaaaggtcagagttcagcaccccaaagaggccagc
gtgaagatccaccaggtgatgaaggtgtccgggtccagtccggccctgcggaccctctcc
tcctcctcttcgggttctgctggtgctccggcccaggctccgcttccagcaggtggcgct
agaatccaggcccagactctgaggggcggcggtacctacaacccgcagtctggcttcaaa
tactgcttcagagaggtgaaagacggacagtgcagctctccacttccgggtctgaggagc
agagaggtgtgctgcaggggaatcgggaaggcctggggtctcaccgactgcagcctctgt
cctgaagctccaggtcaaagaaacagcagctgtcctgttggcttcgagcgaaccaatgga
acgcagtgtgtcgatgtgaatgagtgcctgcagccagggctgtgtgagaacggcatctgt
gtgaacaccagggggagctatagctgtgtgtgtcggttggggttcatccttgacgccaca
catggaatctgcatctcgcagagcgtgatttcagaggagaagggtcagtgctaccgggtc
ctgggctccagtcggggtccgtatacctgctccctgcccatcgtccggaacatcaccaag
cagatctgctgctgcagccgggtcgggaaggcctgggggcccgactgcgtgcggtgcccc
tactttggttcagtcgcctttaaggagatctgtccggccggcccgggttaccattactcg
gcttccactctgcagatcagccaaagagtggacggcgattcgacgggccgagaattcctg
ctgacagcgctggacgcctcagatccagttcccaggtccagcggtgttatagccttcggt
tctcagcagagacctagttcgtccgggtcaccatctggtaccagaaccggtccagtccag
gtccaggtccctgctcagctagatctgaccgccagttccagaccgacgccccctgctggt
tcagcaacccggaatgctcagacccgactggaggtccaacatggccgatcggacatccag
aatatccgactggacctggctctggcgaggccgcagccgccgctggcgttcccctcctct
gtattgcgacccgacccggcgccggtaccagcagactctctgccgaccccggccccgccc
cggacctcggagcgcgggtccagacccggaccagaaccgcctggtccggagagacggccg
gctgcaaacccgaccaaccggcccgccagagtccagcctgtccgtggtgtgtgtcagatc
agaccaggtgtgtgtgagcgtggccgctgcgtggatctgccaggtgggaaacacacctgt
gagtgtgatgagggattccagcccaacgctcagcagagccgctgcttcgatgtggacgaa
tgtcagcaaaatccctgcagtaacgggcgctgtgaaaactccccagggagcttcaggtgt
gtctgttaccatggttacaggctcgctgggaacacctgtgaagacgtggatgagtgtgtg
gatccgctgcagtgtccgggtcaggagtgcgtcaacatgccgggttcgtaccgctgctcg
ccctgccagccgggacttgggttgcttaacggaatctgcacagacatcgacgagtgccgg
ctgtccccgtgctccggcggccgctgcgagaacacgcccggcagctttcgctgcgtctgt
cgccatggttacaggctccagaacaaaacctgtacagacgtggacgagtgcgcggagccg
tctcagtgtccggggcagatgtgtgtgaactctgtggggtcgtacaggtgtgtgtcgtgt
cgtccaggatacacactgaccaacaggcagtgcacagacgtggatgagtgtgcgagcgcc
ggagcgtgtgacgccgagcaggtgtgtgtgaacagcgtgggctcgttcaggtgcgactgt
cgccccggataccggagctccggcctgggcaggcggtgcacagacgttaacgagtgtttg
gagggcgacttctgcttctccagaggggagtgtgtgaacacacctggatcatacacctgt
gtttgctcacctggattcacgctgagtgagaacaggacggcctgcctcgacgtggacgag
tgtgtgaggcccggtgtgtgttcggacggccgctgtgtcaacaccgacggctccttcctg
tgtcagtgtaactcgggcttcagcgccaacccggagcagaccgcctgcctcgacgtggac
gagtgcgtgtccagcggcggctccgtttgcccgtcgcggcggtgtgagaacatcatcggc
tcgttccgctgcctcgccgcctgccaggcgggtcagcgggtcgctgccgacggctcgtgc
gtcgggccggccgtgtcggctccagcatctgcggcggcggcgacgaccttctcgctgccc
gctgcaccacggcttccatcgtctgtttcagagtccgggtcccgccctgagtccacacac
tcttcctcctcttcctcttcctcctcttcctcttcctcctccggggtccagatcagtgcg
gtggacgtttctgcggttctgcaccgccagtctgcggcgcagcccggtgatctgagggac
tgttactacaacctgggggcaggcggctgcagcctgctggcggccaacaccagccagcag
gagtgctgctgcaccgcgggggagggctgggggcggggctgccgcgcccacgcctgcccc
gccccaaacacagctgacttcctgtccctgtgtcccagtgggtggggctacgtgacggtg
ggatcgagcgccttcagctactcagatgtggacgagtgtaagcgcttccagcccgaggtg
tgtaagaacggcgtgtgtgtgaacaacatcccaggctacaggtgctactgctccagcggc
ttcgtctacagctccgccctgctggagtgcatcgattacgacgagtgtgaggaggagagc
tgcgtgggcggcgagtgtgtgaacacggtggggtcgttctactgcagctgcccgccgccg
ctggtggtggacgacacgcagagcaactgcgtcaacgcctcgcacctcaccagggatgag
aacctgtccgtgtgctggcagcacgtcagcgccgacctcctgtgccagagtcccctgctg
ggggcgcaggtcaccttcatcgactgctgctgcttctatggcgagggctgggggatgggc
tgcgccctctgcccccgcaccgactcagaagaatacgcctctctgtgcagctcctactct
gcagcggcgttcccaggaagcttcccagactctggcagaccagaaaccgggccggggcga
ggagctgccccctacggtccggagttctttcctgcagcgccgctttctgacgtagatttc
agtcaggactacatcgactactcgctagcagggcgcagcaggtcagacttcagggccagg
ccgcccgtctccttcagcccgccggacgacgcctacggcggctccgagttcagccccggt
ttctacccggatggagactacggctccccagacggctccgcgcccaggacgcccaccttc
cggctccctccggacccccggtccgacatcgccttcgtgccccggccgctgcctccgtcc
agatccgacccaccgccgctcagcctggcgccacggccaggatcgccgtacggtgaccgg
gaggagggaggagacttcagggggtggaggccgggggcggggcttcctccgttcactgac
agaggaggcggcgagggcagcgggccacggagggtgtatgagaggcgctacgagacgcac
gccagcctgagtgccaccgaggattgtgggattctgcacggctgtgagaacggccagtgc
atccgcgttgccgagggttacacctgcgactgctacgtgggctttgagctggacctgacc
tccatgagctgcatcgacattaacgagtgcgaagacgctgctgcgctgccgttcccgtgt
gtcaacgctcgctgcgtcaacacagaaggctccttccgatgcgtctgcaggagaggttac
gtcatgtcgcgcagacgcaaccactgcatcgctgcttag
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