Xiphophorus hellerii (green swordtail): 116737528
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Entry
116737528 CDS
T07363
Symbol
clpb
Name
(RefSeq) caseinolytic peptidase B protein homolog
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
xhe03110
]
116737528 (clpb)
Chaperones and folding catalysts [BR:
xhe03110
]
Heat shock proteins
HSP100
116737528 (clpb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
Ank
Ank_2
Ank_3
ClpB_D2-small
AAA_5
AAA
Ank_5
Ank_4
Zeta_toxin
Sigma54_activat
AAA_22
bpMoxR
Torsin
AAA_24
AAA_16
AAA_3
nSTAND3
YchF-GTPase_C
NACHT
ATPase_2
ABC_tran
RuvB_N
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
116737528
NCBI-ProteinID:
XP_032446624
LinkDB
All DBs
Position
18:19025045..19059680
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AA seq
678 aa
AA seq
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MLSSVPTRLLTRRSRSLSPCGRVLQTSASGATGPCFRETQAETNRNPIVSTSRVFRRGIL
SEETAVTSVSPSVQYHHLAPRWLSNLENRRSSWAALASRGRQNNQYWEDSRQSGGSENRG
TGGGASRAGLASAGVLSAAAVAFCLRKDSGNKDDSLLEAARTNNAQDVSRLIKEGVDPNH
RHRLGWTALMVAAMNRQHSAVKALLEAGADPNAGDDFNNVYDTSREKGIHSLEVLVSRED
EFSSRLSSRAGFRGCTALHYATLADDPHAVRMLLEAGANPLQTNSLGHTARAYAKEGEVN
TVLQEWEGKFKELQARREAEERRRFPLERRLKEHIIGQEGAINTVASAIRRKENGWYDEE
HPLVFLFLGSSGIGKTELAKQVARYMHKDIKKGFIRMDMSEFQEKHEVAKFIGSPPGYVG
HEEGGQLTKLLKACPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIECKDAIFI
MTSNVASEDIAQHALQLRQEAEELSRRKLADKLEDVEKSDDIKISRQFKDTVIRPILKAH
FRRDEFLGRINEIVYFLPFCYSELLQLVSKELNFWAKKAKQRHDITLQWDHPVLDLLAGG
YNLHYGARSIKHEVERRVVNQLAAAYEQELLPKGCTLRLFVQSEDQEEHSMPRLRLEVVG
EDSSSRTLDIRPPLNPEH
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgttatcatccgttcctaccaggctgctgacgcgaaggtcgcgcagcctgtcaccgtgc
ggtcgcgtgcttcagaccagcgccagtggagccacgggtccatgtttccgcgaaacacag
gcggagaccaaccggaaccctatcgtatccacgtcccgtgtattcaggagggggattttg
tctgaagagactgctgttaccagcgtgagcccatcggtgcagtaccaccacctcgcccca
agatggctgtcaaacctggagaaccgccgtagctcctgggcggctctggccagtagaggg
cgacaaaataaccagtattgggaggacagcaggcagagcggtgggagtgagaaccggggt
actggtgggggtgccagccgagcagggctggcctcagctggtgtgctgtcagccgcagca
gtggccttctgcctgaggaaagactccggtaacaaagatgattctcttcttgaggcagca
agaaccaataatgcacaggatgtgtccaggctaataaaagaaggcgtggatccaaatcat
cgtcaccggctgggatggaccgctcttatggtggctgcaatgaacagacagcacagtgcg
gtgaaagctcttcttgaagctggagccgacccgaatgccggagacgacttcaacaatgtt
tatgacacttcaagggagaaaggcatccactctctggaagtgctggtatccagagaggat
gaattcagcagcaggctcagcagcagagctggtttccgtggctgcaccgcgcttcactac
gccacactggctgatgacccacacgctgtccgcatgctgctggaggctggtgccaacccg
ctgcaaaccaatagtttgggacacacggcccgggcttatgcaaaggagggagaagtcaac
acagttctgcaggagtgggagggcaagtttaaggagctgcaagcgcgtcgagaggcagag
gaaaggaggaggttccccctggagaggaggctgaaggagcacatcatcggtcaggaaggg
gccatcaataccgtggcttcagccatcagaagaaaggagaacggctggtacgatgaagag
catcctctcgtcttcctcttccttggctcgtcaggaatcggaaagacggaattggcaaaa
caggttgctcgctacatgcacaaagacattaagaagggtttcatccgcatggacatgtca
gagttccaggaaaaacacgaggttgcaaagtttattggttctcctccaggatacgttggg
catgaggaagggggtcagctgaccaagttgttgaaggcatgccccaacgctgttgttctg
tttgatgaagtggataaagctcatcctgacgttcttaccatcatgttgcagctgtttgat
gagggtcgtctcacagatggcaaaggaaagactattgagtgtaaggatgccatttttatc
atgacttcaaatgttgcaagtgaagacattgcccagcatgctttgcaactgcggcaggaa
gctgaggagctcagtcgtaggaagctggccgacaaacttgaggatgttgagaaaagcgac
gacattaaaatctcccggcagtttaaagacacggtgatccgaccaatcctgaaggctcat
ttccggagggacgagtttcttggtcggatcaatgaaatcgtgtacttcctgccgttttgt
tactcagagctgctgcagctggtcagcaaagagctcaacttctgggccaaaaaggctaag
cagcgtcatgacatcactcttcagtgggatcacccggtcctggacctactggcgggtgga
tataacctgcactatggagcgcgttccataaaacatgaggttgagcgacgggtcgtcaac
caattagctgcagcgtacgaacaggagctgttgcccaagggttgcacgctgcgtctgttc
gtccaatcagaagaccaggaggagcacagcatgcccaggctgcgcctggaagtggtggga
gaggacagttcatcgagaacgctggacatccgtccaccgctgaatcctgaacactaa
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