Xiphophorus hellerii (green swordtail): 116737544
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Entry
116737544 CDS
T07363
Symbol
bicra
Name
(RefSeq) BRD4-interacting chromatin-remodeling complex-associated protein isoform X1
KO
K25612
BRD4-interacting chromatin-remodeling complex-associated protein
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
116737544 (bicra)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xhe03036
]
116737544 (bicra)
Chromosome and associated proteins [BR:
xhe03036
]
Eukaryotic type
Chromatin remodeling factors
GBAF(ncBAF) complex
116737544 (bicra)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GLTSCR1
Motif
Other DBs
NCBI-GeneID:
116737544
NCBI-ProteinID:
XP_032446646
LinkDB
All DBs
Position
18:5972714..5993701
Genome browser
AA seq
1785 aa
AA seq
DB search
MDDEDGRCLLDVICDPEALNDFLHGSETHLDTDDLLDGTSDPSSSFFSATGGHVSEVQPV
VQLPVSESAGLPRVSVDLDFLEDDDILGGSPGGDGDSNGIGTNHETCDILQQSLAEANIT
EQSLQEAGSELDLVSFGIPGLTQVVQTLPDAGSAAAVGVGIGVGGAATIFPGSAQSAAGN
PGNATADMLGSVLAQQGLQLQPQVMNKTISVQPFMQPVGLGNVTLQPISSLQALSNGSQS
GPLGIGQIQVVGQPTVMTINQSGQQILAKAMGGYQEVSAAGSQAGLGLIQGNKATVGAPA
LNGPAVSVSSTSSISAATMSAPAGLVGFGGGVAPPTQTQAQIMQNVIIQRTPTPIQPKPP
QGGAIQPKVFKPQQPPPPQAAPQAQQNDAHKALGLQQIPVSAAQNVAFLAGKPGSNVVLS
TQAASQGPQFQQALFKQQGAPPSGKPLSVHLLNQQGSIVIPSQTVLQSQNHQFLLPQLQA
GGQILTQHPGGHIITSQGPGGQLIANQILTANQNINLGQVLTSQGHPGATHILSGPIQLQ
PGQMGTPTLFQMPVASLAQSQSQTQTPAASGHAQTVIQGLQNSLTMVGQVEGLSPAISLQ
TTLQAQPGAVPSAAGSQTAEAAVTVLGGSTEPAPQLLPQSSLLAVQPASSAAVSSSPSMS
VSTSSSVTAVGLVPPQAQSGPGRLLFTNQGSSMILSQESLQMFLQQEQRHQTENESTQSV
GVPASVIVSSNSITTAAPAVHDSQLTDSWLGQSHSPSPGPSHMTAVVKVPSGGAQQALKI
QGMSSSPALTSHATTPPVAESPQPSQSPLTLSQQIQSPHHQQPPQSRPSSQPQPQTPSRS
CTPSSHTQLFIVHNQIAESPKPAATSAAQAQLQQTPPQQVHVQVQHQPLPRPASQPTPYQ
QEMPPMSQSPKPLPVAAAAAPPALHQFAAPPVSACAPAVVKAQAPLQGLTAGQQHHLQLV
GAQIQTLSSITQPSPQHKQLLEKLQQVKQNIMLQAKPQPQATSQFNSQQDVPVDKVVMTS
SASADAPAQLPTMLQPTSVLVKTAATGSSDLQVFSGAQGQAAAATGNQTVTLASLTQPAQ
VQPKPGVISSVGGMTLGKAAMKIQVLGPALTQMPVPQPQPPLQTQLTSQTPPVKMPLSTE
PSKEARMLEQLRKHQGSVLHPNYSAPFHSFDDTLHRLLPYHLYQGTANSSQDYQRVDDEF
ERVSCQLLKRTQAMLDKYRYLLFTESKQRLGPSAEMVMIDRMFIQEEKVALNQDRILAKE
RPEEFAATVRMLESGVPSQPKPAPPDLPSASPAASSAAPALIPSPAPLLKVTPTPPPAPA
APASPTPPPAPTTPSSSPFPPTKLVIKHGGGSASVSWSSSCPLAPPAKPVTPAAPSSSSS
LSLNSQSAADDDDALPQRTSKPPIKTYEARSRIGLKLKIKQDQTGFSKVVHNTALDPVHA
PQPRSTLEPPPEPSKSQHLATPPSTVIRTQSPTASVTPTQSNLRNAPPSSSTTTQMNGSL
DHHTVKHNPAASQTTCRLPLRKTYRENISPRVRPGVPGGLDENFSYPITTPSPPRHEAST
PPSERTVIASVRVEKRDREADPSLEGGRLGNTMDKMNEVFNRSVKTATHHHLSLLLDREA
AKEREDEHTDQDADKYKRFSGKNKHRTGGTFRMDQHAPGPPSPESSFARDSLLPAKRCKS
DSPDMDNASFSSGSPPDDSLNEHLQCAIDSILNLQQEPAVRGHHVRAGAGGRTHQHQSQR
PGDSAVSTHRAPPSTAPSAPSSSSLGPQVGGRGHNGSLVPQTQSR
NT seq
5358 nt
NT seq
+upstream
nt +downstream
nt
atggatgatgaggacggcaggtgccttctagatgtaatttgtgacccagaagctctaaat
gactttcttcatggatctgagacccatttggacactgacgaccttttggatggtacgagt
gacccctccagctcgttcttctctgccactgggggccatgtttcagaggtccagcccgtg
gttcagctgccagtcagcgagtcggccggcctccccagagtcagcgtggacttggacttc
ctggaggacgatgacattctgggcggctcaccgggcggagacggcgacagcaacggcatt
ggaacaaaccatgagacgtgcgacatcctgcagcagagcctggcggaggccaacatcact
gagcagagcctgcaggaagccgggtccgagctggacctggtgtccttcgggatcccgggc
ctcacccaggtggtccagaccctgcctgacgctggaagcgctgctgccgtcggggtaggc
attggcgtcggcggggcggcaaccattttccccgggtcggcgcagagcgcggcgggtaac
cctggcaacgccacggccgacatgctggggtcggttctggcccagcaggggctccaactg
cagccgcaggtgatgaacaaaaccatcagcgtccagccattcatgcagccggtcggcctc
ggcaacgtgacgcttcagcccatttccagcctccaggccctttccaacgggagccagtcg
ggaccgttgggtatcggacagattcaggttgtgggccagccgacggtcatgaccatcaac
cagtcggggcagcagatcctggccaaagccatgggcgggtaccaggaggtgtccgctgct
ggctctcaggccggtctgggcctgatccagggtaacaaagccaccgtcggcgctccagct
ttaaacggaccggctgtttctgtcagcagcacaagcagcatcagcgccgccaccatgagc
gcccccgctgggctcgtgggcttcggaggaggagtggcgccgccgacacaaactcaagcc
cagatcatgcagaacgtgatcatccagcgcacgccgacacccattcagcccaaaccccca
caggggggcgccatccagccgaaagtcttcaaaccgcagcagccgccgccgccgcaggca
gcgccccaggctcagcagaatgacgcacacaaagcgcttgggctgcagcagattccggtt
tctgctgcccagaacgtcgccttcctggcgggaaagcccggttctaatgtcgtcctgagc
acccaagccgcctctcagggcccgcagttccagcaggccctgttcaagcagcaaggggcg
ccgccttctgggaagcccctcagcgtgcatctgttgaaccagcagggcagcatcgtcatc
ccgtcccagacagtcctgcagagccagaaccaccagttcctgctgccccagctgcaggcc
ggaggccagatcttgacccaacacccgggtggccacatcatcacaagccagggccccggc
ggacagctcatcgccaatcagatcctaaccgccaaccagaacatcaatctgggtcaggtg
ttaacgtcgcagggccaccccggcgccacccacatcctgtccggacccattcagctccag
cccggtcagatgggcacgccgacgctttttcagatgccggttgcctctttggctcagagt
caaagccagacgcagacgccggccgcctcgggccacgcccagacggtgatccagggcctc
cagaactccttgaccatggtgggtcaggtggaggggctgagcccggccatcagtctgcag
accaccctgcaggcccagccgggcgccgtgcccagcgccgcaggaagccagacagcggag
gctgctgttaccgtgctgggaggctccacagaaccggcgccgcagcttttaccgcagtcg
tcgctcctcgccgtgcagcctgcgtcgtctgccgccgtttcctcctctccgtccatgtct
gtctcaacgtcgtcctccgtgacggccgtggggctggttcccccgcaggctcagagcggc
ccagggaggctgctgttcaccaaccaggggtcgagcatgatcctgagccaggagtcgctg
cagatgttcctccagcaggagcagcgccaccaaacagagaatgagtcaacccaatcagtg
ggcgtcccagcgtctgtaatcgtcagcagcaacagcatcactactgcggcccctgctgtc
catgacagccagttaactgactcctggctgggtcagagccacagcccttcccctggcccc
tcccacatgacagcagtggtaaaggttccctctggtggagctcagcaggctctgaagatt
cagggcatgtcctcctcgccggcgttgacctcccacgccacgacgcctccggtggcggaa
agcccgcagccttcccaatctcccctgactctgagccagcagatccagtcgcctcaccat
caacagccgccgcagtcgcgcccttcctctcagcctcagccgcagactccctcgcgctcc
tgcacgccgtcatcccacacccagctcttcatcgtccacaaccagatcgcagaatctccc
aaacccgctgccacctccgccgcgcaggctcagctgcagcagacgccgccccagcaggtg
cacgttcaggttcagcaccaacctctgcctcgaccggcctcgcagcccacgccctaccag
caggaaatgcctcccatgtcgcagtcacctaagcctcttcctgttgctgctgctgctgct
ccacctgcgctgcaccagtttgccgcgcctcctgttagcgcctgcgctccagccgtagtg
aaagcccaagctcccctccagggcctcacagctgggcagcagcatcacctgcagttagta
ggagcacaaatccagactctgtcctccatcactcagccctcgcctcagcataaacagctg
ctggagaagctgcaacaggtcaagcagaacatcatgctacaagcaaagcctcagcctcaa
gccacgagtcagtttaattcgcagcaagacgtgcctgttgacaaggtggtgatgacatca
tcagcgagcgctgacgcacctgctcagcttcccacgatgctgcagccgacctcggtgctc
gtcaaaaccgccgccacaggatcaagtgacttacaggtattctcaggagcccaagggcaa
gctgcagcagcaacggggaatcagacggtcactcttgccagccttacccagcctgcacag
gttcagccaaagccaggagtgatcagctcggtgggggggatgactctgggaaaagcagcg
atgaagatccaggtgttggggcccgctctgactcagatgccggttccgcagccgcagcct
cctctgcagactcagctcacatcacagacgccaccagtaaaaatgcctttaagcaccgag
cccagtaaagaagccaggatgctggagcagctaagaaaacatcagggttcagtgcttcac
cccaactacagcgctcctttccactcgtttgacgacactctgcacagactgctgccttac
catctctaccagggaactgccaactcctctcaagactatcagagagtggatgatgagttt
gagagagtgtcctgccagctgcttaagcgaacccaggccatgctggataaatatcggtac
ctgctcttcacagagtcaaaacagagactgggcccgtcggcagagatggtgatgatcgac
cggatgttcatccaggaggaaaaggtcgccctgaaccaggacaggattctggccaaggag
agaccggaagagtttgcagcgaccgtgcggatgctggagagcggcgttccatcccagcca
aaaccagcgcctccagatctgccgtcagcgagtccggcggcctcctctgctgctcctgct
ctgataccgtctcccgctcctctcctcaaggtcactccaactcctcctcctgctcctgct
gctcctgcgtctcccacgcctcctcccgcccccaccactccctccagttcccccttccct
cccaccaagctggtcataaagcacggcggcggcagcgcctccgtctcctggtccagcagc
tgtcctctggcgccgccggccaagccggtcactccagcggcaccctcctcttcgtcgtcg
ttgtcgctaaattcccagtcggcggcggatgacgacgacgctcttccacagcgaaccagc
aagccgcccatcaagacgtacgaggcgcgcagccggatcggcctgaagctgaagatcaag
caggaccagaccgggttcagcaaggtggtccacaacactgcgctggatcccgtccacgcc
ccccaacctcgctccaccctggagccgccgccggagccctcaaagtcccagcacctagcc
acgccccccagcaccgtcatcaggactcagtccccgacggcgtcggtcacgcccactcag
agcaacctcagaaacgctcctccgtcgtcatcaacgacaacgcagatgaacggctcgttg
gaccaccacacggtcaaacacaacccggcggcgtcacaaaccacctgccgcctgccgctt
agaaagacctacagggagaacatcagtccccgggtccggcccggcgtccccggcggactg
gacgaaaacttttcctaccccatcaccacgccgtcgccgccacggcacgaggcgtccacc
ccgccatcggaacggaccgtcatagcgagcgtacgggtggagaagcgagacagggaggcg
gacccgagtcttgaaggcggacgcttggggaacacgatggacaaaatgaacgaggtgttc
aaccggagcgtgaagacggcgacccaccaccatctttctctgctgctggatcgggaggca
gcgaaggagagggaggacgagcacacagaccaagacgctgacaagtacaaacggttcagc
gggaaaaacaaacacaggactggcgggacgttcagaatggaccagcacgcgcccggaccg
ccgtccccggagtcgtcgttcgcccgagactctctgcttcccgccaaacgctgcaagtcg
gactcgcccgacatggacaacgccagcttctccagcggcagcccgccagacgactcgctc
aacgagcatctgcagtgcgccatcgacagcatcctcaacctgcagcaggagcccgccgtg
cgcggacaccacgtccgggccggcgctggcggcaggacgcaccaacaccaaagtcagcgc
ccaggagactcggcggtctccacacacagagctccgccctcgacggcgccgtccgctccg
tcatcgtcctcgctgggccctcaggtcggagggcggggccacaacggcagcctggtcccc
cagactcagagcagataa
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