Xiphophorus hellerii (green swordtail): 116737584
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Entry
116737584 CDS
T07363
Symbol
tnfaip1
Name
(RefSeq) BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 2 isoform X1
KO
K15074
BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xhe04121
]
116737584 (tnfaip1)
Ubiquitin system [BR:
xhe04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
116737584 (tnfaip1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTB_2
BTB
BTB_3
Motif
Other DBs
NCBI-GeneID:
116737584
NCBI-ProteinID:
XP_032446714
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Position
18:complement(33499348..33513219)
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AA seq
326 aa
AA seq
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MSGERCPPQKHSQDDPTSPHPLVFCPKTKTCGYRGAVTLGNKYVRLNVGGILFFTPLQVL
TSQNSLLGAMFGGKTEVFTDKEGWVLIDRSGKHFNSILNYLRDGTVTLPKGRQAVQELLA
EAKYYLIQGLVELCQNTLQGNKEQPMCVIPVITSCKEEEQLVQSSSKPVVKLLYNRSNNK
YSYTSNSDDNLLKNIELFDRLSLSFNSRVLFFKDVIGDEICCWSFYGQGRKLAEVCCTSI
VYATEKKQTKVEFPEARIYEETLNTLLYETLPLPDNSLLEATRRSYNNCGSLSEEEEGPG
GTELRERVRRIHIKRYSTYDDRPLGH
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgtctggggagcgctgcccaccacagaaacatagccaggatgatcccacctctccacat
ccccttgtgttttgtcccaagaccaaaacctgtggttaccggggagcagtgactctgggc
aacaagtatgttcgactcaatgttggaggaatactctttttcaccccgctgcaggtgctc
accagccagaactccctgctgggagccatgttcggtggaaaaacggaagtcttcactgat
aaggaaggttgggtcctgatcgaccggagcggaaaacacttcaacagtatcctgaattat
ctgcgtgatggtactgtcaccttacccaaaggtcgtcaggctgtccaggagctgctggct
gaggcaaagtactacctcatccagggccttgtagagctctgtcaaaatactctgcagggc
aataaagagcaacctatgtgtgttatacctgtaattacttcctgtaaagaagaggagcag
ctcgtccagtcatcctcaaagcctgtagtgaagctgttgtacaacagaagcaacaacaag
tactcctataccagcaactcggacgataacctgctgaagaacatcgagctgtttgacagg
ctgtccctcagcttcaacagccgtgtcctcttctttaaagacgtgatcggagacgagatc
tgctgctggtccttctatggtcagggtcgcaagctggcagaagtctgctgcacctccatc
gtctacgccacagagaagaagcagaccaaggtggagttccctgaagctcgcatctatgag
gagactctgaacacgttactttatgagaccttgccactgccagacaactccctactggag
gccacccggcgaagctacaataactgtggttctctaagcgaggaagaggaggggcccggg
gggacggagctacgcgagcgtgtccgcagaatccacatcaagcggtacagcacgtatgat
gaccgtccactgggacactga
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