Xiphophorus hellerii (green swordtail): 116737613
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Entry
116737613 CDS
T07363
Symbol
brca2
Name
(RefSeq) breast cancer type 2 susceptibility protein isoform X1
KO
K08775
breast cancer 2 susceptibility protein
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe03440
Homologous recombination
xhe03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
116737613 (brca2)
03460 Fanconi anemia pathway
116737613 (brca2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xhe04121
]
116737613 (brca2)
03036 Chromosome and associated proteins [BR:
xhe03036
]
116737613 (brca2)
03400 DNA repair and recombination proteins [BR:
xhe03400
]
116737613 (brca2)
Ubiquitin system [BR:
xhe04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
116737613 (brca2)
Chromosome and associated proteins [BR:
xhe03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
116737613 (brca2)
DNA repair and recombination proteins [BR:
xhe03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
116737613 (brca2)
FA (Fanconi anemia) pathway
Downstream FA components
116737613 (brca2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_helical
BRCA2
BRCA-2_OB3
BRCA-2_OB1
BRCA2DBD_OB2
BRCA2_TR2
Tower
Motif
Other DBs
NCBI-GeneID:
116737613
NCBI-ProteinID:
XP_032446768
LinkDB
All DBs
Position
18:complement(9548664..9564623)
Genome browser
AA seq
3056 aa
AA seq
DB search
MDSCIQNMYDAFKDEIWKELGPLDPNWFEVLTAQASLNEGNVADNDELCANQEGYFKVPL
EKTAIESQLFSTPKVFRHCQIVSPDTEDDSSFTAAQEKEMLPWMPRQSPCLFQPPKLCVS
NLKCEGVQPQSEASFDILHSPEKSPASYANHISESLGAQINPDISWTSSFNTPRALPSTL
ILSKTDESPCPESVTADRKVVFVRKLFPSLSNSSLKTSRTSLGPVFPVTDTCSESPLNQS
ESHQQQKVPDALEGDVCSADAPKSFFSNSSSALRKVKPDRVKRKQIIQTNVDVCSHEDTS
KSDNAASSEEDLESGGLPSTTLVKTGDTAISQWSPLSLSEISSSAVGSNMTLPGYTDSVQ
PTRPTLKITDSGFTQKKRKFVYTITTTKSQACGQDFQTTDPSLKISESEQENGKPFVNTP
DKEECQRTKNQRNIVEETINCSLGTKLQDIDMSQLCRDFAQDFSQMTDLKTGENTQRNFS
PAACLSAMKQTKQNGKPANFPNDYSCISKNRCIPTSNQPFSISEVTMIDSGFQSGVADVT
HMTSSSFGLPLLENVGQNQPKQSFKTGMHNFPSTNGSGKPKFDVEVPVQRSGTGQAPDHA
MEIELHIASISTEELWDREETVGESKSSQPQKTPVSLLPADASGFKTASNKGIHISLANL
EKAKRLFEATEDKKSSLDNSTKSYHGIIYKSNSICEKTTDTSSDSSLPSCAGKSFGNVSS
QLTASEKADVTELCTLLEEADSQFEFTQFKSTKKLPNHQDNHNPPQKEDKDLDPALLADI
DFDDSFSSEGGKHSTVMMNDKVASVLENRTHGETAKAINRCTGMSDLLKTETHLNSLSGT
ISEEREFLKLDEPNILPRAEDTETRYLENNKALIHSEAFRTAGGNVLHVSKKCLNKAKAL
FADLERNLTDQKLSDKQNGKNAAITEQKCNRDSDTFRKDSERKKENWDVGSKIENCFSKL
EGVVCSNKNVGNRNDTKSVKKNEIDTIICENGFRKASGKGISISANYMQEADAFFKDCHV
MEHKEGKKSFSNFKSPQVSISKKSVTGCTELENVNTAVVSHHTKERRLNEVERNSKFTAA
LKNEDGKSFLTSKPFAMLHPSKSTDLSAFEELCTGDGFCTAAGKNISVSAAAMKKDESLL
NQIHAPEEINKETNEKEKASKTKCLGDELSNLDDGGFQVVNGKKFAISSAPLKKPTLLRE
SDKSEDAICISSQQSSPKTPVIPVTNLWSGGFSAASGKPVVLSSVALEKTQTLVSDISLN
MDKVAESAPVKKDKKHQTEPEKICSGFTTAGGANDQMSQEKFDDLILAKAVQEEDALSTD
SVLESNNVMLESVGSKKEDEKPHADQRFRTHTPVEAVKGCFKDADKQEKHKENLLPQASC
GFKTASGKKVEVSFEALKKAENLLGDCVGVMDRVNAALPESKAIDLPVRNDGFQSASGKP
VALSSEALQKAKSLFSDIGFRAEDPDTSQMRKSGKNQDGSNNTEKMSCGFTTARGEKVDV
LQKNLQKAKALFKELDDQVLSKAAQEEDAFFAGCDMDINKEMLENDLKGKVHMQRSRKAS
LAKCYTDDEMRVSISIPECSSNANKQVEQRENILPQARRGFQTASGKRVDVSSEALKKAE
TLFSEFEGIQDKTNAMSSQSQSSALSLRNCGFHSASGKPMAPSTEAVQKAKSLFGDITSS
TEDSDFSQTVKADGKQDSRSKTQKICCGFTTAKGEKVDVSQKNLQRAKFLFKEVDDLALT
KAMQDTDPFFNQEEGWTMDSNSEKSSEQTNMAPVNESGSIKGNMSELRTNTGSICEEPES
SSIKAKQNEGGFQTASGKTVAVSAEALSRAKLLLSENKADEESTCVCAASGKPFSHEALQ
KAKTYFSSGVESLPSAADSRSDDHIEEKSHLSICNLNTKSCNQRSDIIQTNKSSDPKFQL
LNLTGCTETQQKFLAQEALDCTKALLEDEVLVGQSLLTTSEDLQLLDDQHLNKKSAEEDK
GRKRRRAEDLIAQPPSKRRLLEEFDRTAENSRGSGLHPVKSGPNGIMDRGVFMCGAFLHP
NITKPNRDAKSFVHTRLQRTIQMPHSDQGDGRSAACRMPTFVPPFFKNSKRDALNKPEAR
DRKKVPAFVPPFKKQRVVHEESSPKQQEDNKQHHSLCLETNSKTDAPLTKTTQNCEEVVT
LVNTPNTKMINQSVPLKVGSVSSTEMLHVDDKLSRSQDRTENIGLARDMQDMRIRKKKRQ
TIRPLPGSLFLTKTSGVARIPLKAAVNGNIPSRYSAQELYECGVHKYVPEITGENAESFR
FNLLQFVKQEMLADGGGVQLADGGWLIPSDDWTAGKEEFYRALCDTSGVDPKLISEQWVY
NHYRWIVWKQASMEKSFPETMGSLCLTPEQVLLQLKYRYDVEVDHSRRPALRKIMERDDT
PAKTLILCVCEIISKGQLLHAQICSDTKMSQSAKTKMETPVAVVRLTDGWYAIKAQLDEP
LTAMLHKGRLAVGGKLIIHGAQLMGPQDGCSPLEAPDSLMLKIWSNSTRRARWDAKLGFH
TDPRPFLLPVSCLYSNGGPIGCVDIYILRSYPMQWMERKSDGGVVFRSARAEEKEARRFN
SHKQKAVELLFAKVQAEFEKEEEGSIKCQRRRQMVGKQDIGNLQEGEDLYEALGDDPAYL
EAHLSEQQLESLQAYRRSLMEKKQAELQDRYWRALDAEDNEMSCPKRDVTPVWRLCIADS
RIQSSCVVYQLNLWRPSSDLQSLLKEGRRFKVYNLVASDGKKPSNVETVQLTGTKKTQFQ
ELQVSQEWVSSHFRQRISTDFVNLQNEEFKPLCGEVDLTGLVISVVDQQGSSPAFYLVDG
KKNFVKVRCFSSLSQAGLEDIVKPRVLLALSNLQLRGQSIHPTPVLYAGDLTVFSTNPKE
IHLQESLDQLRNVVQVQDNFFLTAEEKLAHSIKSDGSCSSSLQPEMPVAARRQDSKTNVA
FLKPIKSLGSFTPVSSNLPAATSSTEKDPKSLKRKRALDYLCRIPSPPPIFPLASVVSPC
VKKTFNPPRRSGPPSTLKPVQTATIKATDSLVEDEWVNDEELAMIDTQALHVGNLF
NT seq
9171 nt
NT seq
+upstream
nt +downstream
nt
atggattcatgcatacaaaacatgtacgacgcatttaaagatgaaatctggaaagagctg
ggacctttggacccaaactggtttgaggtactgacagcccaagcttctttgaatgaagga
aatgttgccgataacgatgagttgtgcgccaaccaagagggatatttcaaggttcctctg
gagaagacggcaatagaaagccagctgttttcaacccctaaagttttcagacactgtcaa
attgtgtcaccagacactgaggatgattcgtcgttcacagctgcacaggaaaaggaaatg
ttaccatggatgccaaggcaaagtccctgtttgtttcagccgccaaaactgtgtgtctct
aatttaaaatgtgaaggtgttcagcctcagagtgaggcgagttttgatattctgcattcc
ccagagaaatcccctgccagctatgccaaccacatttctgaaagtctcggcgcacagatc
aatcctgacatttcttggaccagttcttttaatacaccacgagctttgccatctactcta
attttatctaaaactgatgagagtccctgtccagagagtgttactgcagacagaaaagtt
gtttttgtacggaagcttttcccttcactttcgaattcctcccttaagacatcaagaact
tccctaggtccagttttccctgtgactgatacctgctccgagtctccattgaaccagagt
gaaagtcatcaacaacagaaagttccagatgctctggaaggagacgtttgtagcgcagat
gcacctaaaagtttcttttctaatagtagttctgctctgagaaaagtgaaacctgacaga
gttaaacgtaagcaaataattcaaacaaatgtagatgtctgcagccatgaagatacctca
aaatcagacaatgctgcatccagtgaagaggatctggaatctgggggtttgccttcaacc
acactggtgaaaactggagatacggcaatcagccagtggtctcctctaagtctatctgaa
atctcatcttctgctgtgggaagcaatatgacactgccagggtacactgactctgtgcaa
ccaaccaggccaacattgaaaattactgactctggatttactcaaaaaaagagaaagttt
gtttacactatcacaaccacaaaatcgcaagcttgtggccaagacttccagacaacagat
ccctcactaaagatttcagagtctgaacaagaaaatggcaagccatttgtgaacaccccg
gataaagaagagtgtcagaggactaaaaatcaaagaaatattgtagaggaaaccataaat
tgctctcttggaacaaaactccaggatattgacatgtcacaactttgtcgagattttgca
caggacttcagccaaatgacagacttaaaaactggggagaacacgcaaaggaacttctct
cctgcggcgtgtctgtctgctatgaaacaaacaaaacagaacggaaagccagctaacttt
cccaatgattacagttgtatcagtaaaaacagatgcatccctaccagtaatcaaccattc
tcaatcagtgaagtcactatgattgacagcggattccaatcaggtgtagcagacgtcacc
catatgacttcctcgtcatttggtcttccgctcttagagaatgttggccaaaaccaacca
aagcagagtttcaaaactggtatgcataattttccctcaactaatggaagtggaaagcca
aaatttgatgttgaagtgcctgtgcagaggtctggcacagggcaggctccggaccatgca
atggaaattgagttgcacatagcgagcatatcaacagaggaattatgggacagagaagaa
actgttggtgaaagtaaaagcagccagccacaaaaaactcctgtttctcttctgcctgct
gacgcatcaggattcaaaaccgcctcaaataaaggcatccacatatcacttgctaacctg
gaaaaagcaaagcgtttatttgaagcgactgaagataaaaagtcttctcttgacaacagc
accaaatcctatcatggcattatttataaaagtaattcaatttgtgaaaaaacaacagat
acatcatctgactcaagcctgccctcctgtgccggaaagtcatttggaaatgtcagttcc
caattaacagcctcagaaaaagccgacgtgacggaactttgcactctcttggaagaggca
gacagccaatttgagtttacacagttcaaatctacaaaaaagctaccaaatcatcaagat
aatcacaatcctccacaaaaagaagacaaggatcttgaccctgctcttcttgcagatata
gactttgacgacagctttagttctgaaggtggaaagcactccacagtcatgatgaatgac
aaagtggcctcagttttagaaaacaggacacatggagaaacagcaaaagccataaatcgg
tgcacaggaatgtcagatttgctgaaaacggaaactcatttaaattctttgtcaggaacc
atttctgaagagagggaatttctaaagttagatgaaccaaatattcttcctcgggctgag
gatactgaaactagatatctggagaacaacaaggctttgatccatagtgaggcatttagg
acagcaggtggaaatgttttgcatgtctctaaaaagtgtctgaacaaagccaaggctttg
tttgcagatttggagagaaatttgacagatcagaaactttctgataagcagaacgggaaa
aatgctgccataacagaacagaaatgtaacagggattctgacacgttcagaaaggactca
gaaagaaagaaggaaaactgggatgtcggaagcaaaattgagaattgcttttccaaatta
gaaggggttgtctgttcaaataaaaatgttggaaacaggaacgacaccaaaagtgtgaaa
aaaaatgaaattgacacaataatctgtgaaaatggattcagaaaggccagtgggaaagga
atctccatttcagctaactacatgcaagaggcagatgcatttttcaaagactgccatgta
atggagcacaaagaaggtaagaaaagcttttcaaacttcaaaagccctcaggtcagcatt
tctaagaagagtgtcactggatgcactgaacttgaaaatgtaaatacagccgtggtctca
catcacacaaaagaacgacgtctgaatgaagtggaaagaaatagcaagtttacagcagct
ttgaaaaatgaagacggaaaatcttttctgacttcaaagccgttcgctatgcttcaccca
tcaaagagcacggatttgtctgcttttgaagagctgtgcacaggtgatgggttttgtaca
gctgctgggaagaacattagtgtgtctgctgctgctatgaagaaggatgaatctcttttg
aatcagattcacgcacccgaggagataaacaaagaaactaatgaaaaagaaaaggcttca
aaaacaaaatgccttggtgatgagctatcgaacctagatgatggtggtttccaagttgtt
aatggaaagaaattcgcaatttcatcagcacctttaaagaaaccaactctgctaagagaa
tctgataagtcagaggatgcaatttgtatttcctctcagcaatccagtcccaagacacca
gttatcccagttactaatctctggagtggtggtttttctgcagccagtggcaaacctgtt
gtcttgtcatctgtggccttggagaagactcagacactggtcagtgatatcagtttgaac
atggataaggtggcagaatctgctccagttaaaaaggataagaaacatcaaacagaacca
gaaaaaatatgctctggtttcacaactgcaggaggagcaaacgatcaaatgtcacaggaa
aaatttgatgatttgattttagccaaagcagtgcaagaggaagatgctctctccaccgac
agtgttctggaaagcaacaatgtaatgttggagagtgtggggagcaagaaggaagatgaa
aaacctcatgcagatcaaagatttagaacacacacacctgtagaggctgtgaaaggatgc
ttcaaggatgcagataaacaagagaaacacaaagagaaccttttaccacaagcaagctgt
ggatttaagacagccagtgggaaaaaagttgaagtttcatttgaagctctgaagaaagca
gaaaacttgttaggtgactgtgtaggagtcatggatagagtgaatgcagcactgccagaa
tccaaggctattgatcttccagtcagaaatgatggatttcaatctgccagcggtaaacct
gtagcactttcatcagaggcccttcaaaaggcaaaatctctcttcagtgacatcggtttc
agagcagaggacccagatacttcacagatgaggaaaagtggcaagaatcaagacggtagc
aacaatacagagaaaatgtcttgtggtttcacaactgcaagaggggaaaaagttgatgtg
ttgcagaaaaatcttcagaaggcaaaagcacttttcaaagaacttgatgatcaggtttta
agcaaagcggcacaggaggaagatgctttctttgcaggatgtgatatggacattaataag
gaaatgttggaaaatgacttaaaaggtaaagtacatatgcagagaagcagaaaggcaagt
cttgcaaaatgttatacagatgatgagatgagggtaagcatttctatccctgagtgctcc
agcaatgcaaacaaacaagtggaacaaagagaaaacattttaccgcaagcaaggcgtgga
tttcaaacagccagtgggaaaagagtcgatgtttcttctgaagccctaaagaaagcagaa
accctgtttagcgagtttgaaggaattcaggataaaacaaatgcaatgtcatcacagtcc
cagtcttctgctctttcgctcagaaactgtgggtttcattctgccagcggtaaaccaatg
gcaccttccactgaggctgttcaaaaggcaaaatccctctttggtgacatcacttccagt
acggaggactcggatttttcacagacagtaaaagcagatgggaaacaagacagtcgaagc
aaaactcagaaaatatgttgtggctttacaaccgcaaagggagaaaaagttgatgtgtcg
cagaaaaatcttcaaagggcaaaattcctcttcaaagaagttgatgatttagctttaaca
aaagcaatgcaagatacagatcctttttttaaccaagaggaaggttggactatggacagt
aacagtgaaaaatcatcagaacaaactaatatggcacccgttaatgaaagtggcagcata
aagggaaacatgtctgaactcagaacaaataccggtagtatttgtgaagagcccgaaagc
agttccatcaaagcaaaacagaatgaaggtggatttcagacggcaagtgggaaaacggtt
gctgtttcagctgaggctctgtcgagagcaaaacttctgctgagtgaaaacaaagcagat
gaggagagcacttgtgtttgtgctgcaagtggtaaaccattttcacatgaggccttacag
aaagcaaagacttactttagcagtggagtggagtcattaccttcagcagcagacagccga
agtgatgaccacatagaagaaaagtcacacttgtcaatttgcaatttaaatactaaaagc
tgcaaccagagatctgacattatacaaacgaataaatcttcagacccaaaatttcagttg
ctaaacctcactggctgtacagaaacacagcaaaagtttcttgcccaagaagctttagat
tgcacaaaagccttactagaagatgaagttctagttggtcaaagtctgttgacgacttca
gaagatttgcaactgctagatgaccaacatttaaacaaaaaatcagctgaagaggacaaa
gggaggaaaaggagaagggctgaagatctcattgctcagccaccttctaaacgaaggtta
ctggaagaatttgacagaaccgctgaaaattcacgaggttcaggactccacccagtgaaa
agtggcccaaatgggataatggacaggggtgttttcatgtgcggcgcctttcttcatcca
aacattacaaagccaaacagggatgcaaaaagctttgtgcacacaagattacaaaggaca
atccaaatgccgcattctgaccaaggagatggtcgatctgcagcctgcaggatgccgaca
tttgtcccaccatttttcaaaaactcaaagagagatgcactcaataaaccagaggccaga
gaccgcaaaaaagtgcctgcgtttgttccaccgttcaaaaaacaaagggttgtccatgaa
gaaagttcccctaaacaacaggaggacaataagcagcatcactctttatgtttggagacc
aacagcaaaacagatgcaccacttactaaaacaacccaaaattgtgaagaagttgtcact
ttagtcaacactccaaacactaagatgattaatcaaagtgttcctctaaaggtgggatct
gtcagctctactgaaatgctacatgtggatgacaagctttccagaagccaagacaggact
gagaacattggactggcccgggacatgcaggacatgaggattaggaaaaagaagcggcag
accattcgaccgctgcctgggagcttatttctgacaaaaacctcaggggtggcgagaatc
ccattaaaagctgcagtcaatggaaatattccttcaagatactcggcccaagagctgtat
gagtgtggagtccataagtatgttccagagatcaccggagagaacgccgaatcattccgc
ttcaatttgctgcagttcgtcaaacaagaaatgttagccgatggaggtggtgttcaactc
gctgacggaggctggttgatccccagtgacgactggacagcaggaaaagaagaattctat
agagcattatgtgacacttctggagtggatcccaagctgatcagtgagcagtgggtgtac
aatcactacaggtggattgtgtggaagcaggcctccatggagaaatcatttccagaaaca
atgggcagcctttgcctcaccccagagcaggttctcctccagcttaagtacagatatgac
gtagaggtggaccacagccgcagaccagctttgaggaagatcatggaaagagatgatacg
ccggccaaaactcttattctctgtgtctgtgagatcatctctaaaggtcagctcctacat
gcacagatctgcagtgacaccaagatgtcacaaagtgctaaaaccaagatggaaactcca
gttgcggtcgtgcggcttacagatggctggtatgccatcaaagctcagctggatgaacca
ttgactgcaatgcttcacaaaggtcggcttgctgttggtggcaaattgataatccatgga
gcacaactgatgggaccacaagatggttgctcccctttggaggcaccggattctttaatg
ttgaagatatggtccaatagcactaggcgtgcacggtgggatgctaagctgggattccac
acagatccacgaccatttctgcttccagtctcctgcttgtatagtaatggaggaccaata
ggatgtgttgacatctacatactgagaagctatcccatgcagtggatggagaggaaatca
gatggaggtgttgtgtttaggtccgctcgggcagaagagaaggaggcgagacgattcaac
agccacaaacagaaagcagtagagttgctgtttgccaaggttcaagctgaatttgaaaaa
gaagaagaagggagtatcaaatgtcagcgcagaaggcaaatggttggcaagcaggatatt
gggaacttgcaggaaggagaagacttgtatgaagcacttggagatgaccctgcttacttg
gaggctcatttaagtgaacaacagctggagagtcttcaggcctacaggcgctcactgatg
gagaagaagcaggctgagctgcaggacagatattggcgtgctctggatgcagaggacaat
gaaatgagctgtccaaaaagagacgtgacacctgtatggagactttgcatcgctgactca
aggattcagtccagctgcgtagtttatcagttaaacctttggcggccttcttcagatctc
cagtctttgctgaaggaaggtcgtcgattcaaagtgtataaccttgttgcctctgatgga
aagaaacctagcaacgttgaaactgttcagctgactgggacgaagaagacacagttccag
gaacttcaggtgtcacaagaatgggtgtcctcgcattttcggcaaagaatctccacagat
tttgtaaatcttcagaatgaggaattcaagcctctgtgtggagaagttgatctcacagga
ttagtcatcagtgttgtagatcaacagggttcctcgcctgcattttatttggttgatggg
aaaaagaattttgtgaaagtgcgctgcttcagcagcttgtctcaggccggccttgaagac
atagtgaaaccacgtgttcttttggcactgagtaacctgcagctcagaggccagtctata
caccccactccggttctgtatgctggggatctgactgtcttctctacgaaccccaaggag
attcatctacaggaatcccttgaccaactcagaaacgtggtacaggttcaggacaacttc
tttttgactgctgaggaaaagcttgcccattcaatcaagtctgatggatcctgctcttca
tccttgcaacctgaaatgccagtcgctgcaagaagacaagactcaaagacaaacgtggcc
tttctgaaaccaatcaaaagccttggatcatttacacctgtcagcagtaaccttcctgct
gcaacatcttcaacagaaaaagaccccaaaagcttgaaaagaaaaagagctttggattat
ctttgtcgcatcccgtctccaccacccatcttccccctggcctcagtggtgtctccttgt
gtaaaaaaaacattcaacccacctcgaaggtctgggcctcctagcaccttaaagcctgta
cagactgctacaataaaagcgactgattctctggtggaggatgaatgggtgaacgatgag
gaactggctatgattgatactcaggcgttgcatgttggcaatttattttag
DBGET
integrated database retrieval system
