Xiphophorus hellerii (green swordtail): 116737629
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Entry
116737629 CDS
T07363
Symbol
sptbn4
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04517
IgSF CAM signaling
xhe04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
116737629 (sptbn4)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
116737629 (sptbn4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xhe04812
]
116737629 (sptbn4)
Cytoskeleton proteins [BR:
xhe04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
116737629 (sptbn4)
Intermediate filaments
Intermediate filament-binding proteins
116737629 (sptbn4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
CREPT
PH_20
Helical_needle
Motif
Other DBs
NCBI-GeneID:
116737629
NCBI-ProteinID:
XP_032446800
LinkDB
All DBs
Position
18:5497142..5583533
Genome browser
AA seq
2673 aa
AA seq
DB search
MANASPDLDNAEAQRQLNNNNRPISSGFWETECTSAKLFECSRIKALADERDAVQKKTFT
KWVNSHLARVSCRISDLYNDLRDGYMLTRLLEVLSGELLPRPTRGRMRIHSLENVDKALQ
FLKEQRVHLENVGSHDIVDGNHRLTLGLIWTIILRFQIQVIKINTADNRETRSAKDALLL
WCQMKTAGYPEVNIQNFTTCWRDGLAFNALIHRHRPDLIEFHKLTRSNATHNLQQAFNVA
EHHLGLTKLLDPEDVNTENPDEKSIITYVVSYYHYFSKMKALIVEGKRVGKVLDNCIETK
TIINRYDALASDLLEWIEKTIAIISNQKFANSLTGVQQQLQAFTTYCTIEKPIKFQEKGN
LEVLLFTIQSKLRANNQKPYVPQDGKLISDINKAWERLEKAEHERGVALRKELIRQEKLE
LLAQRFDHKTTMRQAWLNENQRLVSQDNFGYDLPAVEAAMKKHEAIEADIASYEERIGVV
MELSSEMEKEGYYDIRRILACKENILGQWSLLKELVAGRRTRLEKNLAMQKTFQDMVYMI
DWMEDTQALLLSKDFGKHLLEVDDLLQKHSLQEADISVQAERVETLNAAALKFTTIEGYQ
PCDPQVICNRVNHVSSCVEELKQLAAKRRAELEESRQLWAFFQELEESEAWIREKSSILA
SQGFGKDLSSVLRLLQKHKTLAGELLAHRSLLQNTIKRGKQILSEKSFGTAGIQERIMEV
KDEWKKLEDQAAQHLGHLQEALNFFQFSTETDDVAAWLQDAYRLVSSEDFGHDEYSTQSL
LKKHKGVTEAIDKHRLHVVALRKHMVVLSLQYREQEEVQVRLGEVEQLYTEVAEVAVLRQ
QWLHDALAVYRMFSEVNACELWIDEKEQWLEKMEIPEKLEDVEVVAHRFESLDQEMNSLM
GRILDVNEIVQQLLDGGHPSSAEVRGCQDHLNSRWNTIVELVEQKKDQLDSMLRLQNYLL
ECAEIKSQIQDKRKAIDATQYMGSDLGGVLALQRRLSTMEGALSVLEPKLLHLQEEAEFL
AAAHPSRTMEILVPFDGISVEWEELKRTLQGCEDSLMVASRLQSFIQDLDSFLTWLVQTQ
TAAASDQLPNDLEEAEKLINKHAALKEEIGRYEEDYERLQAMNELLESEDAPLPQAALQQ
WLQKLDVGWNKLLEMWESRREVLVQAHIFHLFLRDVKQAESFLNNQESALAHVELPTTVE
TVEGAIKKHKDFTTTMELNLHRIKAVIEAGESLISQNNIYSERIRERIDTLAKRGNRNRV
LAQQWLEKLNDQWELQRFLQDCHELGDWVYEKMLMARDSSRDETQKLHKKWQKHQAFMAE
LAQNKEWLDKIEKEGQQLIKEKPELSPVVRKKLEEIRECWLDLESTTQAKARQLFEANKA
DLLVQSYESLDQRLGQLEGQLAYVDQGQDLTTVNKQLKKLHTMETQMEEWYKEAGQLQVQ
TASIPQQTQIQGTVVERQAAVETRMARLIEPLKERRRLLLASKEVHQVGRDLEDEILWVQ
ERLPLAMNQEHGSSLQAVQQLMKKNQTLQRELEGHRSRIEDVLERAGIIATIRSPEADCV
RAGHDQLAQLWALLWAETERRQLVLDAMYQAQQYYFDTAEVEAWLSEQELHMMNEEKGKD
EPSTLQLLKKHLLLEQTIEDYAETIGLLSQQCRQLLEMGHPDSERISKRQSQIDRLYVSL
KDLVEERKSRLEQQYWLYQLNREVDELEQWIAQREVVASSPELGQDFEHVSVLQEKFTEF
ASETGSVGQERVTAVNQMVDELIDYGHSEAATIAEWKDGVNEAWADLLELMETRAQMLTA
SHQLHKFFSDCKEILAQIEDKHRRIPEVRARQGSTSNTSTLQRLLQSFEQDIQLLVTQVR
QLQESAAQLRTVYAGEKAEAIACREHEVMQCWKELLTSCEECRLQITTETDKLRFFSMVR
DQIMWMESIICQIGTGEKPRCAEKSNSWRDVSSVEVLMNYHQSLKSEVEARSQSTLECIE
MGKMLLAARNPAAEEIKEKLEKVVAKQRELSEKWDKHWEFLQQLLEVHQFAQEAMVAEAW
LTAQEPLISSKELGGSVDEVEQLIRRHEAFRKAAATWEERFSSLRRLTTVEKLRAEQSKL
PPTPLLGRKVFLDPQDAAPGPAALPRLPVSPVMRQTIYEQNEATTPPSPSPATPTPSPSA
AARRLASAVVNSSGYRHGGVVAVQPAASSIASVATAAMLVSANQMRESASTAKEQATKAM
SYLQPEAKTSPYLRQPKIKHLDDAVTPLIVASRLERGRERGREREERAEVAVMAEVVLQE
PGRERLHSEPTRGPRGSRTDPLGRAEPQVQAYQRQLSSEQLIQARRDELPQEVWREQAGR
RDRRTLERQTSSEQEGHEGRRRERERHRVERQESSDNDVGREQSDRRSTGGEKRTTMAEI
VEQLQEREAAQARGEVPRLPNGLPEKSSRPDRPRARDRPKPRRRPRPKEPGETTRRSRSA
PAQSSQATPQPPTHTAHHEGFLFRKLDIESMKKSTNSRSWVNLYCVLNKGELGFYKDAKN
MATPYNNEPLLSLSHCHCDVTNGYKKKKNVFTLKTKDGSEFLFHAKDEEDLKVWVNNITA
SISEHEEIAKWGQPQPTTSSTDEGTRRDGSKVDNRSDRGGERSDRGDQIERADKEKEREK
EKEKEKERERGERSEKSDRAGKSDGKRSEKKKK
NT seq
8022 nt
NT seq
+upstream
nt +downstream
nt
atggctaatgcctctccagacctggacaatgcagaagcccagcgccagctcaacaacaac
aaccgaccaatcagctccgggttctgggagaccgagtgcaccagcgccaaactgttcgag
tgttcccgcatcaaggcgctggcagatgagagagatgcagtgcagaagaaaaccttcaca
aagtgggtcaactcccacctggccagagtgtcctgtcgcatatctgacctctacaacgac
cttagggatggctacatgctcaccagactgctggaggttctcagtggggagctactgccg
agacctacgaggggtcgtatgcggatccacagcctggaaaacgtggacaaagctctgcag
ttcctgaaagagcagagagttcatctggaaaacgtcggttcccacgacattgtggatgga
aaccatcgcctcacgctcggccttatctggaccatcatccttcgctttcagatccaggtg
atcaaaataaacacagcggacaacagagagacccgctccgccaaggacgcgctgctgctg
tggtgccagatgaagaccgcagggtacccagaggtaaacattcagaacttcaccacctgc
tggagagacggcctggccttcaacgccctcatacacagacacagaccggacctgatagag
ttccacaagctgacgcgctccaatgcgacgcacaacctgcagcaagccttcaacgtcgcc
gagcaccacctgggtctcaccaaactcctggaccccgaggatgtgaacacggagaatcca
gatgaaaagtccatcattacgtacgtggtctcctactaccattacttctccaagatgaag
gctcttattgtggaggggaagagggttggcaaggtgttggataactgcatcgagacaaaa
acgatcatcaaccgctacgacgctctggcgtcggacctgctggagtggatcgagaaaacc
atcgccatcatcagcaaccagaaattcgccaactcactgactggagtccagcagcagctg
caggccttcacaacctactgcactatagagaaacccatcaagtttcaggagaaaggaaac
cttgaggtccttctgttcaccatccaaagcaaactcagagccaataaccagaaaccctac
gtgcctcaagacgggaagctcatctcagacatcaacaaggcctgggagcgcttggagaag
gcggagcatgagaggggcgtggctctgcgtaaggagctgattcgtcaggagaagctggag
ttgctagctcaacgcttcgatcacaagacgaccatgaggcaagcctggctcaacgagaac
cagagactcgtgtcgcaggataacttcggctacgatctgccggccgtggaggcggcgatg
aagaagcacgaggccatcgaggcggacatcgcctcgtacgaggagcgcatcggcgtggtg
atggagctctcctcggagatggagaaggagggatactacgacatccggcgcatcctggcc
tgcaaagagaacatcctgggccagtggagcctgctgaaggagctggtggccggcaggcgg
acccggctggagaagaacctggctatgcagaaaacctttcaggacatggtctacatgatc
gactggatggaggacacacaggctctgctgctgtcgaaggacttcgggaagcatctcctg
gaagtggacgacctgctgcagaagcacagcctgcaggaagctgacatttccgttcaggcg
gagagagtcgagacgctcaacgctgcggcgctcaaattcaccaccatcgagggctaccag
ccgtgcgacccgcaggtgatctgtaaccgtgtgaaccacgtctcttcctgtgtggaggaa
ctgaaacagctagccgctaaacgccgcgcggagctggaggagtcgaggcagctgtgggcg
tttttccaggagctggaggagtcggaggcctggatccgggagaaaagctccatcctggcg
tctcagggctttgggaaggacctgagcagcgtgctgaggttgctacagaaacacaagact
ctggccggggagctgctggcgcaccgctcgctgctgcagaacaccataaagcgggggaaa
cagattctgagcgaaaagagctttggcacggcggggatccaggagcgcatcatggaggtg
aaagacgagtggaagaagctggaggaccaggcggcgcagcatctcggccacctgcaggag
gcgctcaacttcttccagttctccacggagacggatgacgtggcggcgtggctgcaggac
gcctaccgcctggtctccagcgaggactttggccacgacgaatactccactcagtcgctg
ctaaagaagcacaagggcgtgacagaggccatcgataaacacaggttacatgtagttgct
ctgcgcaaacacatggtggtgctgtctctgcagtacagagagcaggaggaggttcaggtg
cgtttgggtgaggtggagcagctgtacacggaggtcgcagaggtcgccgttctcagacag
cagtggctccacgacgcactcgccgtgtaccgcatgttcagcgaggtgaacgcctgcgag
ctctggatcgacgagaaggagcagtggctggagaagatggagatcccggagaagctggag
gacgtggaagtggtggcgcacaggtttgaaagcctggatcaggagatgaacagcctgatg
ggacggatcctggacgtcaatgagatcgttcagcagctgctggacggaggtcatccgtct
tcagcggaggtcagaggttgtcaggatcacctcaactccaggtggaacaccatcgttgag
ctggtggagcagaagaaggatcagctcgactcgatgcttcgcctgcagaattacctcctg
gagtgcgccgagatcaagtcccagatccaggacaagaggaaagccatcgacgccacgcag
tacatgggcagcgacctgggaggcgtcctcgctctgcagcgacgcctctccaccatggag
ggggcgctgtctgtcctggagcccaaactgctgcatctacaggaggaagcagagtttctg
gccgccgctcatcccagccgaaccatggagatcctggtgccgttcgatggcatcagcgtc
gagtgggaggagcttaaaaggacgctacagggatgtgaggactcgctgatggtggccagc
aggctgcagagcttcatacaggacctggactccttcctcacctggctggtccagacccaa
acggccgctgcctcggaccagctgcccaacgatctggaggaggcggagaaactcatcaac
aagcacgccgctctcaaagaggagatcggacggtacgaggaagactacgagcgtctgcag
gccatgaacgagctgctggagtcggaggacgcccccctgccgcaggccgccctgcagcag
tggctgcagaagctcgacgtcggctggaacaagctcctggagatgtgggagagccggagg
gaggttctggtccaagctcacatctttcacctgttcctgcgagacgtcaaacaagccgag
tccttcctgaacaaccaggaatcggctctggcccacgtggagctccccaccacggtggaa
acggtcgaaggcgccatcaagaaacataaggatttcactaccaccatggagctgaacctg
cacaggatcaaagctgtgatcgaggcgggagaaagcctgatcagccagaacaacatctac
tccgagcgaatccgggagcgcatcgacactctcgccaagaggggaaaccggaacagggta
ctggcccagcaatggctggaaaaactgaacgaccagtgggaacttcagagatttctccaa
gactgtcatgagctgggggactgggtgtacgaaaagatgctgatggcgagggacagcagc
cgagacgagacccagaagctgcacaagaagtggcagaagcaccaggctttcatggccgag
ctggcccagaacaaggaatggctggataaaatcgaaaaggaagggcagcagctgataaag
gaaaagccggagctgagcccggtggtccggaagaagctggaggagatccgggagtgctgg
ctggacctggagagcaccactcaggccaaagctcgccagctgtttgaggccaacaaggcg
gacctgctggttcagagctacgaaagcctggaccagcggctggggcagctggaggggcag
ctggcctacgtggaccagggtcaggacctcaccaccgtcaacaagcagctcaagaagcta
cataccatggagacccagatggaggagtggtataaggaggcggggcagctccaggtccag
acggcttccatcccgcaacagacacagatccagggcacggtggtggagcggcaggccgcc
gtggagaccaggatggcccgactcattgagccgttgaaggagaggcggcgccttcttcta
gcgtctaaggaggtccatcaagttgggcgagacctggaggacgagattttgtgggtccag
gagcgcctccctctggccatgaaccaggagcacggctcatcgctgcaagccgtccagcag
ctcatgaagaagaaccagacgctccagagggagctggagggccacaggagcagaatagaa
gacgtcctggagagggcagggatcatcgccaccatcaggagcccagaggccgactgcgtc
agggcgggccacgaccagctggcccagctgtgggccctgctgtgggccgagacggagcgc
aggcagctggttctggacgccatgtaccaagcccagcagtactacttcgacacggccgag
gtcgaggcctggctgagcgagcaggagctgcacatgatgaacgaggagaagggaaaggac
gagccgagcacgctgcagctgctgaagaaacatttgctgctggaacaaaccatcgaggat
tatgctgagaccatcggcctgctgtcgcagcaatgtcgccagctgctggagatgggacat
ccagacagcgaacggatcagcaagcgtcagtcgcagatcgaccgtctgtacgtgtctctg
aaggacctggtggaggagaggaagagccgcctggagcagcagtactggctgtaccagctc
aacagggaggtggacgagctggagcagtggatcgcccagagggaagtggtggccagctcg
cctgaactgggccaggactttgagcacgtctccgtcctccaggaaaagttcacagagttt
gcgtcggagacaggaagtgtgggacaggagcgcgtgacggccgtcaatcagatggtggac
gagctcatcgactatggccactctgaggccgccaccatcgccgagtggaaggacggggtc
aacgaggcctgggccgacctgctggagctcatggagacccgagcgcagatgctcactgct
tctcaccagctgcacaagttcttctccgactgcaaagagatattggcccagattgaggat
aagcaccggcggatcccagaggtccgggctcggcagggcagcacatccaacaccagcacg
ctgcagaggctcctgcaaagcttcgaacaggacatccagctgctggtcactcaggtgcgt
cagctgcaggaaagcgcggcccagctgaggacggtgtatgcaggcgagaaggccgaagcc
atcgcttgccgtgagcacgaagtgatgcagtgctggaaggagctgctgacttcctgtgaa
gagtgccggctgcagatcaccacggaaacggacaagctgaggttcttcagcatggtccgg
gatcagatcatgtggatggagtccatcatctgtcagatcggcaccggggagaaacccagg
tgtgcagaaaagtccaacagctggagggacgtgtcgtcggtggaggtgttgatgaactac
caccagagcctgaagagcgaagtggaggcccgcagccagagcacgctggagtgcatcgaa
atgggaaaaatgctgctggctgctagaaaccctgcagctgaagagatcaaggagaagcta
gaaaaggtggttgcgaagcagcgtgagctttcagagaagtgggacaaacactgggagttc
ctccagcaactgttggaggttcaccagttcgcccaggaggcgatggtggcggaggcctgg
ctgacggctcaggaaccgctgatcagcagcaaggagctgggcggcagcgtggacgaggtg
gagcagctcatacgccgacacgaagccttccggaaagccgccgccacctgggaggagaga
ttcagctcgctgcggcgtctcactacggtggaaaagttgagagcggagcagagcaagctg
ccgccgacgccgctgctgggccgtaaagtcttcctggaccctcaggacgcggcgccgggc
ccggctgcgctgccccgcctccccgtctcccccgtcatgaggcagaccatctacgagcag
aacgaagccaccacaccgccgtcgccctcgcccgccacgcccacgccgtccccgtcggcg
gccgcccgccggcttgcctccgccgtcgtcaacagctccggctaccggcacggcggcgtg
gtggccgtccagccggccgcttcatccattgcctccgtcgccacggcggccatgttggtt
tcagccaatcagatgcgggaaagcgccagcacggcgaaggaacaggcgacgaaagccatg
agctacctgcagccggaggcgaagacgtcgccgtatctacggcaaccgaagatcaaacac
ttggatgacgcggtgacgccgctgatcgtggcgagccgcctggagagagggagagagcga
gggagggagagagaggagcgcgcagaggtggcggtgatggcggaggtggtgctccaggag
ccgggccgggagcggctgcacagtgagcccaccagggggccccgcgggtccagaaccgac
ccgctgggccgcgccgagccgcaggtccaggcgtaccagcggcagctgtccagcgagcag
ctgatccaggcgcggcgcgacgagcttccgcaggaagtctggagggagcaggcgggacgg
cgcgacaggcggacgctggagcggcagacgtccagcgaacaggaaggacacgaaggccgg
cggagagagagagagcgccaccgagtggagaggcaggagtccagcgacaatgacgtgggg
agggaacaatccgaccgacgctccactggaggagagaagagaaccaccatggcagaaatt
gtagagcagcttcaagaaagagaagcagcacaggcgcgcggcgaggttccccgcctgccc
aacggtctgccagaaaagtcttcccgtccggaccggcccagagcccgggaccgacccaaa
cccagacggcggccgcgccccaaagagccgggagagacgacgcggcgttcccgatcggct
ccggcccagagcagccaggcgacgccgcagcctccgacccacacggcgcatcacgagggc
ttcctgttccgcaagctggacatcgagagcatgaagaagagcaccaacagcaggtcatgg
gtcaacctgtactgcgtgctgaacaaaggggagctgggcttctacaaggacgccaagaac
atggcgacgccctacaacaacgagccgctgctcagcctgtcccactgccactgcgacgtc
accaatggatacaagaagaagaagaacgtcttcacgctcaaaacgaaggatggcagtgaa
tttctgtttcatgcaaaagacgaggaggacctcaaagtgtgggtgaacaacatcaccgcc
agcatttcagagcacgaggagatcgccaaatggggccagccccaaccaactacctcatcc
accgacgaagggacgcggcgagacggcagcaaggtggacaaccggtccgaccgcggcggc
gagcgctccgaccgtggagaccagatagagcgcgcggacaaagagaaggaacgggagaag
gagaaagagaaggaaaaagagagggagagaggggaacgctcagagaagtcagatcgggca
ggaaagtcggacggaaaacgctcagagaagaagaagaaatga
DBGET
integrated database retrieval system
