Xiphophorus hellerii (green swordtail): 116737631
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Entry
116737631 CDS
T07363
Symbol
rsf1
Name
(RefSeq) remodeling and spacing factor 1 isoform X1
KO
K11657
remodeling and spacing factor 1
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
116737631 (rsf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xhe03036
]
116737631 (rsf1)
Chromosome and associated proteins [BR:
xhe03036
]
Eukaryotic type
Chromatin remodeling factors
RSF complex
116737631 (rsf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD
WHIM1
CDC27
DDT
Motif
Other DBs
NCBI-GeneID:
116737631
NCBI-ProteinID:
XP_032446807
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All DBs
Position
18:2461931..2484471
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AA seq
1382 aa
AA seq
DB search
MAAPAVARSSGPPLCPSFAEVCSFLERYGAALDLPELTFPQIERYLRDTTAVPKPLVELH
VKLLRKLGRSVTTDRWEKYLAKVCQELNSTWAWELEQKGYQEMSMECKSSILKYLCECQF
DDNLKFKMVVNDEDPEKMRLQPIGRDQQGLMYWLQLDQEQNIRLYTEEQDDLDGSTWKCI
VRTRNDLAEALELLKAQIESSQSQDQDQNQNRAGTRSASPAERDTSTTGKSETNEDDGIN
SVKLPKASEEENDNKTTNPVTEKMQVIKEEEEKQENTEPKMEEKTAAFDNRVSTITAVKA
EPRDADGPKNAVSVLIAPGAALMKLNKEDEAERAAVRSNQQAKIPLKKRDLKLAGCFQTN
HLNNASSSIIVCNPSVINSKDCRGRDGKPINSLELQGSPASCLQQVITSRQELTNGRAPH
PPPRDGHNGVIGQVGVIGHVGVIRSPPELHRAPEENGPKSEPSGVKAGEEVSRQSVLVRK
GPPEQDATSAATLPAHPIPPLTDQKPDLTEIKGESVGFSSQMTVNQNNKAAEKMDKADQS
SGQPEENQNIKEEPGINSALNSGASGKGDSEPQKAEKLNKMIQQEQGVNGGLVSVVKLKK
IGFVSEQKRVPLEEASSELQKEGIRLKIKIPPHRRNKLRRKEGKEEMKTREGQKEGRPLR
RSARICRSSALPNCRPSSKAAESQRKKPQKKQTPPARTRDEEEADEEEDDEEQNSPSTKN
QKHELAGKFSKRRGKRRHGRPRWTNVRPKRHKPNEEEEEEEGGWKKRGEEEKEGSGSEEE
LSKSEEIPTEDACTHCGLPNHPELILLCDSCDQGYHTACLRPPLMLIPDGEWFCPPCQHK
MLCEKLEEQLQNLDSALKKKERAERRRERLVYVGISVENIIPEGDVEEEEEEEEEKSTKK
KDPKKTKNLGRRSTRTRKHISYRFDDFDDAIDEAIEEDIRDLCSGAETGKEIPSVVSEGV
KENQRPIRTQSRTARNKKRRRLNDLESDSTAIESEEEFMLSNSSEEEEFAASGADDGEED
DEDAGSDGGSWDRGARPKRGTRGTPKFKPRMPQRRGRKRRRRRSSEEEEETDVEMDSDRF
SDMTDSDADRKRRGLRRGQRQQVNYRETSESSDNSRTLAKRQPVKRRGRPRKEHFSSDYS
DVSASSRDSEDDDDDNDEEEDGRRRVDKRRRRGAEEEELRSGRTRKKRKRYEDEKDEEGG
RRLKRRQLRREDEDDDGRRRRTERDEEDPERMGRGKRREMLSQQRRKLLAQMLKKRRPST
DEDESDSDDSQSSSGDDRPIRKRLNRIDSDDDEDERHVDTDDEDEGQKRKKSEHKSDGGA
QEKGRSLSPSNGHQTSRDAERRERHNGPTHPAEDEEEEEDEEEEEDEGQSDSLNSAQNSP
RS
NT seq
4149 nt
NT seq
+upstream
nt +downstream
nt
atggctgctccggcggtggcgagaagctccggcccgccgctttgcccgagcttcgcggag
gtatgttcgtttctggagcgctacggagcagcgttggacctccccgagctgactttcccg
cagatagagaggtatctgcgtgacacgacggcagttcctaaaccgttggtggagctccat
gtgaagctgctcagaaagctggggaggtccgtgaccacagaccgctgggaaaagtacctg
gctaaggtttgccaggagctgaacagcacatgggcctgggagttggagcagaaaggttac
caggagatgtcgatggagtgcaagtcgagcatcctcaagtatctgtgtgagtgtcagttt
gacgacaacctgaagttcaagatggtggtcaacgatgaggaccccgagaagatgcgtctg
cagcccatcggtcgggaccagcagggcctgatgtactggctccagctggaccaggagcag
aacatccgactctacacagaggagcaggacgatctggacggatccacctggaagtgcatc
gtccggacccggaacgacctggccgaggctctggagctgctgaaggctcagattgagtcc
agtcagagtcaggatcaggaccaaaaccagaaccgggctggaaccaggagcgccagccct
gcagaaagagacacgagtacgacggggaaatcagagacgaatgaagacgatggaatcaac
agcgtcaaactccccaaagcttcagaggaagaaaatgacaacaagacgaccaatccagtg
acagagaagatgcaagtaataaaggaagaggaggaaaagcaggaaaacactgaacccaag
atggaggagaagacggctgccttcgataaccgcgtcagcaccatcaccgccgtcaaagct
gagcccagggacgcagacggacctaaaaacgccgtgtccgtcctcatcgcgcccggcgcc
gctctaatgaagctgaacaaggaagacgaagcagagagggccgccgtccggagcaaccag
caggcgaaaataccactgaagaagagggacctgaagctggccggctgcttccagaccaac
cacctgaacaacgccagcagcagcatcatcgtctgcaatccctccgtgatcaacagcaag
gactgtcgggggagagacgggaagccgatcaactcgttagaactgcaaggaagtccggcg
tcctgtctgcagcaggtcatcacctccaggcaggagctgaccaatgggagagcgcctcac
ccgcctcccagagacggccataacggcgtcatcggtcaggtcggagtcatcggtcacgtc
ggcgtcatccgcagcccacctgagctccacagagctccggaggaaaacgggccgaagtcg
gaaccaagcggcgtgaaggctggagaggaagtgagccggcagtcggttctggttaggaag
ggaccgcctgagcaagacgccacctccgctgccacacttcctgctcatccaatcccaccg
ctaacggaccagaaaccggatcttacagagataaaaggagaatctgttggtttctcctct
cagatgacggtaaatcagaacaacaaggcggcagagaaaatggacaaggctgaccaaagc
agcggtcaaccggaggagaaccaaaacatcaaagaggaacctggaataaactcagcgtta
aactcaggagcgtctggaaaaggagactctgaacctcaaaaagcagagaagctgaataag
atgatccagcaggaacaaggggtgaacggcgggctggtcagcgtcgtcaaacttaagaag
atcgggtttgtttcggaacagaagagggttccactggaggaagcatcttccgaactccag
aaagaaggaatccggctgaagatcaagatcccaccgcaccggagaaacaaattacggcga
aaagaaggaaaggaggagatgaaaacccgagaggggcagaaagaagggaggccgctgagg
agatctgcacggatctgcagatcatctgctttgccaaactgcaggccaagctcaaaggcg
gcagagagccagagaaagaaaccgcaaaagaaacagacgccgcctgccagaacgagggat
gaagaagaggcggatgaggaagaggacgatgaggagcagaactcaccttcaacaaagaac
caaaaacacgaacttgctggaaaatttagcaagcgaaggggcaaacgaaggcacgggcga
ccacgatggaccaatgttcgccccaagagacacaaaccaaatgaggaggaggaagaggag
gaaggcgggtggaagaaacgaggagaggaggagaaagaaggaagcggctcagaggaggag
ttgagtaaatctgaggagattcccactgaggatgcctgcactcactgtggcctgcccaac
cacccagaactgatcctgctgtgtgactcgtgtgatcagggataccacaccgcctgtctg
cggccgccgctcatgctgatcccagatggagaatggttctgtccaccttgccaacataag
atgctgtgtgagaaactggaggagcagctgcagaacctggacagcgctctgaagaagaag
gaacgggcagagcggaggagggaacggctggtttacgtcggcatcagtgtggagaacatc
attcctgagggagatgtggaagaggaggaggaggaggaggaagagaaatctaccaagaaa
aaagatccaaaaaagaccaaaaacctggggaggagatcaaccaggaccaggaaacacatc
agctacaggtttgatgatttcgatgacgccattgatgaggccatagaggaggacatcagg
gatctctgcagtggagcagaaacggggaaagagatcccctccgttgtgtccgagggcgtg
aaggagaaccagcggccaatcagaacccagagccgcaccgccaggaacaagaagagacgt
cggctgaacgacctggagagcgacagcacggcgatagagagcgaagaagagttcatgctc
agcaacagctcggaggaagaagaattcgccgcttcgggtgccgacgacggcgaggaggac
gatgaagacgcaggcagcgacggcggcagctgggacagaggcgcgcgtcccaaacggggc
acgagagggacgcctaaattcaaacccaggatgccccaacgccggggcaggaaacggcgg
cggaggcggtccagcgaggaggaggaagagacggatgtagagatggattcagatcggttc
agcgacatgacggacagcgatgcagacaggaagaggcgtggcctgaggcggggccagcgc
cagcaggtgaactaccgggaaacatcggagtcgtccgacaactccaggacgttggccaag
cggcagccggtgaaacgacgcggccgaccgcggaaggagcatttctccagcgactacagc
gacgtttccgcttcctcgagggattctgaggatgatgacgatgacaatgatgaggaggaa
gatggccggcggagagtggacaagagaagaagaagaggagcggaggaggaggaactccgg
agcggcaggacgagaaaaaagcggaaaagatacgaagatgagaaggacgaggaaggaggg
cggcggctgaagaggaggcagctgaggagggaggatgaagatgatgatgggaggaggagg
aggacggagagagacgaagaggatccggagcggatgggccgggggaagaggagagagatg
ctttcgcagcagcgccgcaaactcctcgctcagatgctgaagaaacgccggccgtccacc
gacgaagacgagtccgactcggacgattctcagtcttcatcgggagacgaccgcccaatc
cgcaagagactcaaccgcatcgactccgatgacgacgaggacgagagacatgtcgataca
gacgacgaagacgaaggacagaagaggaaaaagtcggagcacaaaagcgacggcggcgct
caggaaaaggggcggagcctgtctccatcaaacggacaccagacctccagagacgctgag
agacgggagagacacaacggccccacgcatcccgccgaagatgaggaggaggaagaagac
gaggaggaggaggaggatgaaggccagtcggactcattgaactctgcccagaacagcccg
cggtcatga
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