Xiphophorus hellerii (green swordtail): 116737693
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Entry
116737693 CDS
T07363
Name
(RefSeq) autophagy-related protein 16-2-like isoform X1
KO
K20868
autophagy-related protein 16-2
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
116737693
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xhe04131
]
116737693
03029 Mitochondrial biogenesis [BR:
xhe03029
]
116737693
Membrane trafficking [BR:
xhe04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
116737693
Others
Specific organelles associated proteins
Auto phagosome
116737693
Mitochondrial biogenesis [BR:
xhe03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
116737693
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
WDR55
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
ATG16
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_EIPR1
Beta-prop_Aladin
Beta-prop_WDR41
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_NWD2_C
Beta-prop_ACSF4
Beta-prop_VPS8
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_WDR19_1st
Beta-prop_WDR75_1st
Beta-prop_HPS5
Beta-prop_NOL10_N
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
116737693
NCBI-ProteinID:
XP_032446941
LinkDB
All DBs
Position
18:1829837..1843109
Genome browser
AA seq
582 aa
AA seq
DB search
MDPGGASRRSSRSAETWRGHIIQQLKHRDRIQSAMFQDLIRFYTELLEKTSMTKRLLSRP
PAEGCARSSLQQLKKTTGELAYKVLELQQQIKIKEHVLQELQTRLQKEGGRLAESSEAKQ
ALRDEVEQVRQKNKTLKAAYDALLQRQREAESKLREEKEKEERVLEDMMHQKKQAAARMN
HRNERRSRARQATMEKQLQTAARSKVIVESSSSAPTSRSTSPKPEDQDKSGGRGATRLFR
SASASSPRFFSSIREMFDRKRRGHSVHSLEEDLLFPVGICLSARVPVRPLQVLEAHEQGI
NAVRFSFGSDLLATGGTDRVIKLWDVRAGSLTHRATLDGSTEGITCVEFDHMGRRILAAS
HNKSALLWRLDDSAPKVTLTGHSRKVTAARFTCVPHQVVTGSTDRTVRLWDLNRAACVQQ
GEVASFCSDLVCSDSSIISGHFDCKIRVWDSRTVSCVQELPSQGRVTSLDLSSDRRQLLS
CCRDDCLQLLDLRWTNDRMCFRADGFKCGGDSTKAVISPDGCYLAAGSADGAVYIWNVST
GGLETRLPDRHSSSVTAVSWSLSGEHFVSVDRSRRAVLWSDI
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atggatcctggtggggcgtcgcggcgaagcagccggtccgcggagacctggagggggcac
atcatccagcagctgaagcaccgggaccggatccagagcgccatgttccaggacctgatc
cggttctacactgagctgctggagaaaaccagtatgaccaaaaggctcctcagcagacct
cccgctgagggctgcgcccgttcctctctgcagcagctgaagaagacgacaggcgagctg
gcctacaaggtgttggagctgcagcagcagattaaaatcaaagagcatgtcctgcaggaa
ctacaaaccagactgcagaaggagggcggtcggctagcagagtcgtccgaagctaaacag
gctctgagggatgaggtggagcaggtcagacagaagaacaagacgctgaaggcggcgtat
gatgcgctgctgcagcgtcagagggaggcggagtccaaactcagggaagagaaggagaaa
gaggagcgcgtcctggaggacatgatgcatcagaagaagcaggccgccgcccgcatgaac
caccgcaacgaacgccgctccagagctcgacaggcaaccatggagaagcagctgcagacg
gctgccaggtcaaaggtcatcgtcgagagttcgtccagcgctccgacttccaggtccacg
tctccaaagccggaggatcaggacaagtccggcggccgaggagcgactcgcctcttcagg
tcggcgtcggcctcctcgccgaggttcttctcctccatcagagagatgtttgacaggaag
agaaggggtcactcggtccacagcctggaggaggatctgctgtttcccgtcggaatctgt
ttatcagccagagttcctgtccgaccgctgcaagtcctggaagcccatgagcaaggcatc
aacgcggtgcggttcagcttcggctcggacctgctggccaccggcgggacggaccgggtc
atcaagctgtgggacgtccgggcaggctcgctgacccacagagccacgctggacggcagc
acggaggggatcacctgcgtggagttcgaccacatgggccgcaggatcctggcggcgtcg
cacaacaagtccgccctgctgtggcgcctggatgactccgcccccaaggtgactctgacg
ggtcacagcaggaaggtgacagcggccaggttcacctgcgtcccccaccaggtggtgaca
ggaagcaccgaccggactgtccggctctgggacctgaacagagccgcctgtgtccagcag
ggggaggtggcgtcgttctgcagcgacttggtctgttctgacagcagcatcatcagcgga
cattttgactgcaagatcagagtctgggacagcaggacggtgagctgcgttcaggagctt
ccctctcagggcagagtcacctctctggacctgagctccgaccggcgccagctgctcagc
tgttgccgtgacgactgcctccagctactggacctgcgctggaccaacgaccggatgtgc
tttagagccgacggcttcaaatgcggcggcgacagcaccaaggcggtcatcagcccagac
ggatgctacctggcggccgggtccgctgacggagccgtttacatctggaacgtctccacc
gggggcctggagacccgcctccccgaccggcacagctcgtccgtcaccgccgtgtcctgg
tctctttccggagaacacttcgtcagcgtggacaggagccggcgggccgtcctctggagt
gacatctga
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integrated database retrieval system
