Xenorhabdus hominickii: A9255_11730
Help
Entry
A9255_11730 CDS
T04538
Name
(GenBank) nuclease SbcCD subunit C
KO
K03546
DNA repair protein SbcC/Rad50
Organism
xho
Xenorhabdus hominickii
Brite
KEGG Orthology (KO) [BR:
xho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xho03400
]
A9255_11730
DNA repair and recombination proteins [BR:
xho03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
A9255_11730
Archaeal homologous recombinant proteins
A9255_11730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
AAA_21
cobW
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
AOM41191
UniProt:
A0A2G0QCZ5
LinkDB
All DBs
Position
2523329..2527009
Genome browser
AA seq
1226 aa
AA seq
DB search
MKILSLRLKNINSLQGEWKIDFTAEPFASNGLFAITGSTGAGKTSLLDAICLALYHETPR
LNTISSSQNELMTRHTAECLAEVEFEVKGVAYRAFWSQRRARNQANGNLQAPKVELADKK
SGKILADKIQDKKEKIAEITGLDFSRFTKSMLLSQGDFAAFLNAQDKDRADLLEELTGTE
IYGILSQEIYQRHKEAQSELNLQHAKASSIELLTPEQQQAYQDQQQQLTTEETQLSQQIK
ALQIADQWLFRRDELQQSLANNTSLLQQAEHVIQKAQPQLQQLTASEPAEKIRPFWDAHL
RALNEKNRLIEQQTRIENERQQQQARLQPSEQELTHLGKLREEHQQHQNQQEKLITEEIM
PLDHKIDTQAKDLFALEKEIAGQDRDFSDISSQYQVAQSQTDMLNKEQAALETYHEEHPY
YHALDSKLPEWKQLFVRQKERQEKINQLTQNTQQLTTEIARVNDHLNTLSTALKQQKIQN
QTLHNSLTAAENKLTALQEKHPLDQLQKYLANYQKQLLSQNQLEILLPQIQQLKNTIATD
QIQLTQSQALVNPLPDQITALNQQLIEKQQHYDDLDNHIRLEQRIISLEKERTQLKEGES
CPLCGSTHHPLIREYQNIALPQSENRLKALRRQIDQLQENRTTLQQKQQIQQQISEQLQQ
NIAQSNAKLAKFVEQWEHHCQQLQATELPMDAEPVNHFINQRQYAYQQHLNQQEALLQTE
KACQAAEKALAANRGQYQAHEKNIELEKFKQDSSQKLLAEKTAEIRQIESDHAATAQQLS
TELQATPFILPTHQETENWLQQREQELKNYHASLERWQQLQKELAGLQSQLHELEKQKSK
LVIHIHTLNEQQQKQKQLLEQTRQARHHLFGEQSVITIRQALQQKYNELEVTYTQAVFHQ
QELQNKMNQLAGAANEIEKSSKAAIAESQHASLQFQTGLAQQGFPDQPAFERALLEPEQR
EKLQQLQTILEQQQLQAKTKHRESEIALQRHTETQPQLLEQYESHQLSAILLDITAKLKH
NNLQQGEVRTLLNSDATRRQQQQTLLTQIALSQQNYDDWSYLNNLIGSADGAKFRRFAQG
LTLTHLVHLANIRLEKLHGRYYLQRKDDGGLELQIVDTWQADAVRDTKTLSGGESFLVSL
ALALALSDLVSNKTQIESLFLDEGFGTLDPETLDIALDALDHLNASGKTIGVISHVEALK
ERIPVQIKVEKKNGLGFSQLAPEFRV
NT seq
3681 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattcttagcttacggctgaaaaatatcaattcactacaaggcgagtggaaaatt
gactttacggcagagccttttgccagcaatggattattcgccattacaggctcaacaggg
gcaggaaaaacctccttgctggatgccatctgtctcgcgctatatcatgaaacaccaagg
ctaaataccatttcgtcttctcagaatgaattaatgacccgtcatacggctgaatgtctt
gctgaagtggaattcgaagtcaaaggtgttgcttatcgggcattctggagccagcgccgt
gcccgtaaccaagctaatggcaatctacaagccccgaaagttgaattggcggacaaaaaa
agcggtaaaattttggccgataaaatccaagacaaaaaagaaaaaatcgctgagataacg
ggactggattttagccgttttaccaaatcaatgctcttatcacagggtgatttcgccgct
ttcttaaatgctcaggataaagatcgggcagatctactggaagagctaactggcaccgaa
atttacggcattttgtcccaagaaatttatcaacgccataaagaggctcaatctgagctg
aatcttcagcacgctaaagcttcctccattgaattactcacaccagaacagcagcaagca
taccaagatcagcagcaacaactgactacagaagaaactcaactcagccaacagattaaa
gcattacaaatagccgaccagtggcttttcaggcgggatgaacttcagcaatcactggca
aacaatacgtcacttttacaacaagcagagcacgttattcaaaaagcccaacctcaattg
cagcagcttacggccagcgaaccagcagaaaaaatccgcccattctgggatgcacatctt
cgtgctctcaatgaaaaaaatcggctcattgaacaacaaacaagaatagaaaatgaacgc
cagcagcaacaggcacggctgcaaccctctgaacaagaactcacacatttaggaaaactg
agggaagaacatcagcaacatcaaaatcaacaggaaaaactgatcacagaggagatcatg
ccactcgatcataaaatcgatacgcaagcaaaagatctgttcgctcttgaaaaagaaata
gctgggcaagaccgcgatttctctgacatttcatcccaatatcaagttgcgcaaagccaa
acagatatgctgaataaagaacaagcagcgctggaaacctaccacgaggagcatccctat
taccacgccttggacagtaaactaccagagtggaagcaattatttgtccgtcagaaagaa
cgacaagagaaaataaaccaactgacgcaaaacacccagcaacttaccacagagatagcc
cgtgtaaacgatcatttgaatacgttgagcacagcactaaagcaacaaaaaatacagaac
caaacattgcacaacagcctcactgctgcggaaaacaaactcactgctttgcaagaaaag
catccgttggatcagttacagaaatatttagcaaattatcagaaacagttactgtcgcaa
aaccaactggagatcttgctacctcagatccagcaactaaagaatacgatcgccaccgat
cagatccaactgacacaatctcaagcattagttaacccgctacctgatcagatcaccgcg
ctcaatcagcagttgatagaaaagcagcaacactatgacgatctagataatcatattcgg
ttagaacaaaggattatcagcttagaaaaagaacggacacaattaaaagaaggagaatct
tgtccgctttgcggttcgactcaccatcctttaatccgtgaataccaaaatattgccctg
ccacaatcagaaaatcgtttgaaagccttgcgccgacagattgaccagctacaagaaaac
cgcactaccctacagcaaaaacaacaaatccagcagcagatcagcgaacaattacagcaa
aatattgcacaatccaacgctaaattagcgaagtttgttgaacaatgggaacaccattgc
cagcagttacaagccactgaattgccgatggatgcagagcctgttaatcactttatcaac
caacggcaatatgcttatcaacaacacctgaaccaacaggaagcacttttacaaacagaa
aaagcctgccaagcagcggaaaaagcactggctgccaatcgcggacaataccaagcccat
gagaaaaatattgaactggagaaattcaaacaagattcatcccagaaactattagcagaa
aaaacagccgagatccgacagatagaatccgatcatgcggccacagcacagcaattaagc
actgaattacaggctacaccttttatactgccaactcatcaagagacagaaaactggctg
caacaacgtgaacaagaattaaaaaattatcatgcttcactagaaagatggcagcaatta
cagaaagagttggcgggcttacaaagccaacttcatgaattggaaaaacaaaaaagcaag
ctcgttatccatattcataccctgaatgaacaacagcagaaacaaaagcaattattggaa
caaacacggcaagcacgccatcatttatttggtgagcaatccgtcattaccattcgtcag
gctttgcaacaaaaatacaatgaattggaggtaacctatacacaagccgttttccatcag
caagaactgcaaaacaaaatgaatcaattagctggtgcagccaatgaaattgaaaagagc
agtaaagcagccatagcagaaagccaacatgcctctcttcaatttcaaactggattggcg
caacaaggttttcccgatcaacccgcttttgaacgtgccctattggaacctgaacaacgg
gaaaaattacaacagttacaaacaatacttgaacaacagcaattgcaagccaaaacaaaa
caccgtgaatcagaaatagcgttacagaggcatacagaaacgcaaccacaactgcttgag
caatatgaatctcatcaattatcagcgatactgctcgacattacggcaaaactgaaacac
aacaacctgcaacaaggcgaagtcagaaccctgttaaacagcgatgccactcgccgccag
cagcagcagacactactgacacaaatcgcgctctcgcaacaaaactatgatgactggagt
tatctcaataacctgattggttccgctgacggcgctaaatttcgccgtttcgcgcaaggt
ctgacattaactcatctcgtacatctggcgaatatccggctggaaaaattgcatggccgt
tactatttgcaacgcaaagatgatggtggactggaattgcaaatcgtggacacttggcaa
gctgatgccgtcagggataccaaaaccctctccggtggagaaagtttccttgtcagcctt
gcccttgcactcgccttgtctgacttagtgagtaacaagacgcaaatagaatccctgttt
cttgatgaaggctttggtacgcttgatccagaaacccttgatatcgcactggatgcactg
gatcacctcaatgcctcaggaaaaaccatcggggtaatcagccacgtagaagcattaaaa
gaacgcattcctgttcagattaaagtggaaaaaaagaatggattggggttcagtcaattg
gcacccgaatttcgggtttaa
DBGET
integrated database retrieval system
