Xenorhabdus hominickii: A9255_13625
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Entry
A9255_13625 CDS
T04538
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
xho
Xenorhabdus hominickii
Pathway
xho03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xho00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A9255_13625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xho03019
]
A9255_13625
03016 Transfer RNA biogenesis [BR:
xho03016
]
A9255_13625
Enzymes [BR:
xho01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
A9255_13625
Messenger RNA biogenesis [BR:
xho03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
A9255_13625
Transfer RNA biogenesis [BR:
xho03016
]
Prokaryotic type
tRNA degradation factors
A9255_13625
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
PNPase
RNase_PH_C
KH_1
OB_RRP5_4th
S1_2
KH_2
S1_RRP5
aRib
KH-I_KHDC4-BBP
KH_SLS1_2
Motif
Other DBs
NCBI-ProteinID:
AOM41518
UniProt:
A0A2G0QE28
LinkDB
All DBs
Position
complement(2980455..2982593)
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AA seq
712 aa
AA seq
DB search
MLNPIVRKFQYGQHTVTIETGMMARQATAAVMVNMDDTAVFVTVVGQKKVKAGQDFFPLT
VNYQERTYAAGRIPGSFFRREGRPGEGETLVARLIDRPLRPLFPEGFLNEIQIIATVVSV
NPQVNPDIVAMIGASAVLALSGIPFNGPIGAARVGYINDQYVLNPTSDELKHSSLDLVVA
GTAGAVLMVESEADLLTEEQMLGAVVFGHEQQQIVIDNINSLAAEAGKDKWDWSPEQINQ
PLHDRIAELAESRLGDAYRITEKQERYAQVNIIKEEVSALVLAEAAEKGTELDEGEVLDV
LSVLEKNVVRGRVLRGEPRIDGREKDMVRALDVRTGVLPRTHGSSLFTRGETQSLVSATL
GTERDAQVIDELMGERTDRFLFHYNFPPYCVGETGMVGSPKRREIGHGRLAKRGVLAVMP
NANEFPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEGDNFV
VLSDILGDEDHLGDMDFKVAGSRDGISALQMDIKIEGITREIMQIALNQAKGARLHILNV
MEQAIQGPRNDISEFAPRIHTIKINPDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVK
IAATDSDKARHAISRIEEITAEVEVGRIYNGKVTRIVDFGAFVAIGGGKEGLVHISQIAD
KRVEKVTDYLQVGQEVPVKVLEIDRQGRIRLSMKEAVTTTDEAPQSSESSVE
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
ttgctgaatccgatagttcgtaaatttcagtatggtcagcacactgtgaccattgaaacc
ggcatgatggctcgtcaagcgacagcagctgttatggtaaatatggatgacaccgcggta
tttgtaaccgtagtgggtcagaaaaaagttaaagcaggtcaggatttctttcctttgact
gttaactatcaggagcgtacttacgctgctggtcgtattccgggaagtttctttcgtcgt
gaaggccgtccaggagaaggcgaaacgttagtagcccgtctgattgaccgtcctctgcgt
cctctgttcccagaaggtttcctgaacgaaattcaaatcatcgcgacagtggtttctgtt
aaccctcaggtaaaccctgatattgttgccatgatcggtgcctctgcggtactggcgttg
tctggcattccattcaatggcccaattggtgctgcgcgcgttggttacatcaatgaccag
tacgtactgaacccaaccagcgatgaactgaaacacagtagtctggatctggtcgttgca
ggtacggcaggtgcggtattgatggtagaatccgaagcggatctgctgactgaagaacaa
atgctgggtgcagttgtatttggtcacgagcaacagcaaattgtgattgataacatcaac
tcactggctgctgaagcaggcaaagataaatgggactggtcgccagagcaaatcaaccag
ccactgcatgaccgtattgctgaactggctgaaagccgtctgggcgatgcttaccgcatt
actgagaagcaggaacgttacgctcaggttaatattatcaaagaagaagtttctgcgttg
gttctggctgaagcggctgaaaaaggcactgaactggatgagggcgaagttcttgacgtt
ctgtctgtgctggagaaaaacgttgttcgtggtcgtgttctgcgtggcgagcctcgtatt
gatggccgtgaaaaagacatggtacgtgctttggacgttcgtactggcgtattgccacgt
actcatggttcatctctgttcacccgtggtgaaactcagtcactggtttctgcaactctg
ggtacagagcgtgatgcacaagttatcgatgaactgatgggtgagcgtacagaccgcttc
ctgttccattataacttccctccatactgcgtgggtgaaacaggtatggtcggttcacca
aaacgtcgtgaaattggtcacggtcgtttggcgaaacgtggcgtattggctgtgatgcca
aatgccaacgaattcccgtataccgttcgtgttgtgtctgaaatcactgaatctaacggt
tcttcttctatggcttccgtctgtggcgcttcactggcgctgatggatgcgggcgtgccg
attaaagcagctgttgctggtatcgcaatgggcctggtaaaagaaggtgataactttgtt
gttctgtctgacattctgggtgacgaagatcatctgggcgacatggactttaaagttgca
ggtagccgtgatggtattagtgcactgcaaatggacatcaaaattgaaggtattacccgt
gagatcatgcagattgccttgaatcaggcaaaaggtgcccgtctgcacatccttaatgtg
atggagcaggctattcagggtccacgtaatgatatctctgaatttgcaccacgcattcac
accatcaagatcaatccagacaagatcaaagatgtgattggtaaaggtggctctgtgatc
cgagcgttgacagaagaaaccggcaccaccattgaaattgaagatgatggtacagtgaag
attgcggcaactgacagtgataaagcccgtcacgctatcagccgtattgaagaaatcact
gctgaagttgaagttggccgcatctataatggtaaagtcactcgtatcgttgattttggt
gcatttgttgctattggtggtggtaaagaaggtctggtacacatttctcagatcgcggac
aaacgtgtagagaaagtcactgattatctgcaagttggtcaggaagttccggtaaaagta
ctggaaattgatcgccagggacgtatccgcctgagcatgaaagaagcagtaactactacc
gatgaagcaccacaatcatcggaatcatcagtagaataa
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