Xenorhabdus hominickii: A9255_14245
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Entry
A9255_14245 CDS
T04538
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
xho
Xenorhabdus hominickii
Pathway
xho03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xho00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A9255_14245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xho03019
]
A9255_14245
Enzymes [BR:
xho01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
A9255_14245
Messenger RNA biogenesis [BR:
xho03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
A9255_14245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
CMS1
Motif
Other DBs
NCBI-ProteinID:
AOM41626
UniProt:
A0A2G0QEB9
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All DBs
Position
3113969..3115252
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AA seq
427 aa
AA seq
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MSKTHLTEKKFSDFALHPKVVEALDKKGFSNCTPIQALTLPFTVEGRDVAGQAQTGTGKT
LAFLTSTFHYLLTHPAAKERKINQPRALIMAPTRELAVQIYSDAEELAASTGLKMGLAYG
GDGYDKQLKVLESGVDVVIGTTGRLIDYAKNGHIHLGAIQVVVLDEADRMYDLGFIKDIR
WLFRRIPVATERMNLLFSATLSYRVRELAFEQMNNPEYVEVEPLQKTGHRIQEELFYPSN
EEKMRLLQTLLEEEWPDRCIIFANTKHRCEDIWAHLAADGHRVGLLTGDVAQKKRLRILE
EFSLGNLDILVATDVAARGLHIPSVTHVFNYDLPDDCEDYVHRIGRTGRAGESGHSISLA
CEEYVLNLPAIEEYIQHQIPVSKYNSDALLKDLPVPKRRNRARSGGHPRRTNMPRRGNAP
HNRKRSG
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaacacatttgacagaaaagaagttttccgacttcgcattgcaccccaaggta
gtagaagcccttgataaaaagggattttccaactgtacgccgatacaggcgctaacattg
ccttttactgtcgaaggccgagatgttgcggggcaagcacaaaccggaacaggcaagacg
ctggcatttctgacgtctacttttcattatttactaacccaccctgcggcgaaggagcgc
aaaatcaatcaaccaagagcgttgattatggctcctacccgcgaattagctgtccaaatt
tattctgatgccgaagaactcgcagcatccactgggttgaaaatgggtctagcttacggc
ggcgatggctatgataagcaacttaaggtgctggaatccggcgtcgatgtcgtcattggc
acaaccggtcgtttgatcgattacgcaaaaaatgggcatatccatcttggtgccattcaa
gttgtcgtacttgatgaagcggatcgtatgtacgatttaggatttatcaaagatatccgc
tggctatttcgccgcatccctgttgccacagaaagaatgaatttgctgttttccgccacc
ctatcttaccgagtgcgtgaactggctttcgaacaaatgaataatcctgaatatgtggaa
gtggagcctttacaaaaaacagggcatcgcattcaggaagagctattttatccctccaat
gaagaaaaaatgcgtctgctacagaccttgttggaagaagagtggccagatcgctgtatc
atttttgccaataccaaacaccgctgtgaagatatctgggcacatctggctgccgatggt
catcgtgtcggtctgctgacgggtgatgtcgcacagaaaaaacgcctgcgtattctcgaa
gaattcagtctgggaaatctggatattctggttgctaccgatgttgccgctcgtgggtta
catattccatctgtgacacatgtctttaactatgacctgccggatgactgtgaagattat
gtccaccgtattggtcgaactggccgtgctggagaaagtggtcattccatcagtctggca
tgtgaagagtatgtgttgaatctgcctgctattgaagagtatatccagcatcaaatacct
gtcagcaaatataacagcgatgcactgctgaaagacttaccagtacccaagcgccgtaac
cgtgcacgttcaggaggacatccacgccgtaccaatatgccgcgccgtggtaatgcaccg
cacaaccgtaaacgttcaggctaa
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