Xenorhabdus hominickii: A9255_16490
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Entry
A9255_16490 CDS
T04538
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
xho
Xenorhabdus hominickii
Pathway
xho03030
DNA replication
xho03410
Base excision repair
xho03420
Nucleotide excision repair
xho03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xho00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
A9255_16490
03410 Base excision repair
A9255_16490
03420 Nucleotide excision repair
A9255_16490
03440 Homologous recombination
A9255_16490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xho03032
]
A9255_16490
03400 DNA repair and recombination proteins [BR:
xho03400
]
A9255_16490
Enzymes [BR:
xho01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
A9255_16490
DNA replication proteins [BR:
xho03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
A9255_16490
DNA repair and recombination proteins [BR:
xho03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
A9255_16490
NER (nucleotide excision repair)
GGR (global genome repair) factors
A9255_16490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Prok-E2_E
HHH_5
WHD_BrxR
Motif
Other DBs
NCBI-ProteinID:
AOM42927
UniProt:
A0ABN4S8L4
LinkDB
All DBs
Position
3615191..3618016
Genome browser
AA seq
941 aa
AA seq
DB search
MAQIADNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPSHVAV
VFDAKGKTFRDELFAEYKSHRPPMPDDLRAQIEPLHKMVKAMGLPILVVGGVEADDVIGT
LALQAEKEGRAVLISTGDKDMAQLVTQNITLINTMTNTILGPKEVTEKYGIPPELMIDFL
ALMGDSSDNIPGVPGVGEKTALGLLQGIGGLNDIYARLDEIATLSFRGAKTLGGKMEQHK
EVAYLSYKLATIKTDVELDKTCLGLSVVPPDAGELLALFSHYEFKRWINDVQNGSWLEGN
GQKQAAASTKSQSAAVAPTAVKISPENYQTILDRQSLDEWIEKLKQAPAFSFDTETDGLD
TLTANLVGMSFAISVDKTEAVNKTEARESDVEAAYLPLGHDYLDAPQQLDLHDVLAALKP
LLEDANLPKIGQNLKFDRGVLARYDVALNGIVFDTMLESYVLNSVAGRHDMDSLAERHLG
YKTTTFEEIAGKGKKQLTFNQIPLEEASKYAAEDADVTLRLHQAMYPQIESVSTLNKIFQ
KIEMPLVPVLSRIERTGVLISAQTLAEHSREITARLDELEKSAYELAGEEFNLASPKQLQ
TILFEKMKLPVLKKTPNGAPSTNEEVLEELAEQHELPRVILEHRGLAKLKSTYTDKLPQM
VNPLTNRVHTSYHQAVTATGRLSSRDPNLQNIPVRNDEGRRIRQAFIAPEGYRIVAADYS
QIELRIMAHLSQDKGLLDAFAQGKDIHRATAAEVFGVPLEQVTSEQRRSAKAINFGLIYG
MSAFGLSRQLGIPRGEAQRYMDLYFERYPGVLSYMERTRQQAADHGFVETLEGRRLYLPE
IKSRNAMRRKASEREAINAPMQGTAADIIKLAMIAVDDWIVNEQPNVRMIMQVHDELVFE
VHESELALAEQKIRQLMEQSMQLNVPLRVDVGIGDNWDQAH
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atggcacagatagcagacaatcccctgattttggttgatggttcttcatacctttaccgt
gcataccatgcgtttcctccactgacgaacagtgcaggagaaccaacgggcgccatgtac
ggcgtgctgaacatgttgcgtagcttgatcatgcaatataaacctagccatgtggcggtt
gtatttgatgccaagggtaaaacgttccgtgatgagttatttgctgaatataaatcccat
cgaccaccgatgccggatgatttgcgtgctcagattgagccgctgcataaaatggtcaag
gcaatgggattgccaattctggttgtagggggtgttgaagctgatgatgttatcggaaca
ttggcgttgcaggctgaaaaagaaggccgcgctgttctaatcagcactggcgataaagat
atggcgcagttagtgacacagaatattacgttgattaataccatgaccaatacgattctg
gggccgaaagaggtaacagaaaagtatggtattccacctgaattgatgatcgattttctc
gctctgatgggggattcttccgacaatattcctggtgtgccgggagtaggagagaaaacg
gcattgggattgttgcagggcattggtggattgaatgatatctatgccagacttgatgag
atagccacactgagtttccggggtgccaagacattgggcggaaaaatggaacagcataaa
gaggtggcttatctctcatataaattggcaacaattaaaactgatgttgagctggataaa
acgtgtttgggactctccgttgtgccaccggatgctggtgaattgctagccctgtttagc
cactatgagttcaagcgttggatcaatgacgtgcagaatggcagttggctggaaggtaac
ggccagaaacaggctgctgccagcactaagtctcaatccgcggcggttgcaccaaccgct
gtcaaaatttcaccggaaaactatcaaaccatccttgatcgtcaatcccttgatgagtgg
attgagaagctgaaacaggctccggcgttctcttttgatacagaaacggatggccttgat
actttgacagccaatcttgtggggatgtcttttgctatttctgtggataaaacagaggct
gtaaataaaacagaagcgagggaatcagacgttgaagcggcttatctgccgctggggcac
gattatctggatgcacctcagcagttggatttgcatgacgttctcgccgcattaaaaccg
ctgctggaagatgcaaatctgcctaaaattggtcaaaatctgaaatttgatcgaggggtt
ctggcacgttatgacgttgcgctgaatggtatcgtttttgataccatgctggaatcgtat
gtcctgaatagcgtagctggacgacatgatatggatagtcttgcagagcggcatttgggg
tataagacgacaacgtttgaagaaattgcgggcaagggcaaaaagcagctgactttcaat
caaatcccactggaagaagcatcaaaatatgctgctgaagatgcggatgtgaccttgaga
ttacatcaggccatgtatccgcagatagaaagcgtatcgaccctgaacaagatcttccaa
aaaattgaaatgccgttggtaccggtgctttcccgtatagaacggacaggtgtattgatc
agcgcccaaacactggctgagcattcacgggaaatcactgcacgtttagatgagctggaa
aaatccgcttatgagctggcaggggaagaattcaatctggcttcacctaagcagttacaa
accattctgtttgagaaaatgaagttgcctgtgctgaaaaagaccccgaatggtgcgcca
tcgaccaacgaggaagtactggaagagctggcagaacagcatgaattgcctcgggtgatt
ctggagcaccgtggtttggcaaaactgaaatccacctatacggataaactgccgcagatg
gttaatccactgacgaaccgcgttcatacctcatatcatcaggcagtcactgctacggga
cgcctttcttcccgtgatccaaacctgcaaaatattcctgttcgcaatgatgaaggaagg
cgtattcgtcaggcttttattgcgccagagggttaccgtattgtggcggcggactattca
cagattgaattgcgcatcatggcgcacttgtcacaggacaagggtttgctggacgctttt
gcgcaaggtaaagacattcaccgggcaactgctgcggaagtgtttggtgtgccattggaa
caagtgaccagtgagcagcgtcgcagtgcgaaggcgattaactttggtctgatctatggc
atgagtgcgtttggtttatcccgccagctaggtattcctcgtggtgaagcgcaacgttat
atggatctctactttgagcggtatccgggggtattgtcttatatggagcgtacgcgccag
caagccgccgatcatggatttgttgaaacgctggaagggcgccgattgtacctgcctgag
atcaaatcgcgtaacgccatgcgccgtaaagcgtctgagcgtgaggcgatcaacgcacca
atgcagggtacggcggcggatattatcaaactggcaatgattgcggttgatgattggatt
gtgaatgaacagccaaatgtgcgcatgattatgcaggttcacgatgaactagtatttgag
gtgcatgaatctgaattggcgctggcagagcagaaaattcggcaattgatggagcaaagt
atgcagctcaatgtgccgttgagagtggatgtcgggatcggtgataactgggatcaggca
cattaa
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