Xenorhabdus hominickii: A9255_17250
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Entry
A9255_17250 CDS
T04538
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
xho
Xenorhabdus hominickii
Pathway
xho02020
Two-component system
xho02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
xho00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
A9255_17250
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
A9255_17250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xho03021
]
A9255_17250
Transcription machinery [BR:
xho03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
A9255_17250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Motif
Other DBs
NCBI-ProteinID:
AOM42148
UniProt:
A0A2G0QFY3
LinkDB
All DBs
Position
complement(3788633..3790066)
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AA seq
477 aa
AA seq
DB search
MKQSLQLKLSQQLAMTPQLQQAIRLLQLSTLELQQEIQLALDTNPLLEQEDPHEEVDSQE
PPDTEVMDAREALEQKEMPEELPLDTSWDEIYSAGTLSGTSSDYKTEDFPVYQGETHQTL
QDYLMWQAELTPFTETDFAIATSIIDAIDDTGYLTVSVDEILISIGNDELALVEVETVLK
RIQHFDPIGVAARDLRECLLIQLSILLPETPHLNEAKLIVSKYLELLGNRDFRNLLRQSK
LKENALKGAIDIIQSLEPKPGLVVNTSESEYVIPDVLVQKVNESWQVRLNADSIPRLRIN
QQYAAMGQQTNNENDSLFIRSNLQEAKWLIKSLESRNETLLKVAICIVERQQDFFEHGEE
YMKPLVLADIAYQIDMHESTISRVTTQKYLYSPRGIFELKYFFSSHVNTDSGGEASSTAI
RALVKKMVAAENPAKPLSDSKLTSILAEQGIQVARRTVAKYRESLSIPPSNQRKKLV
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaaagtttgcaactcaagctcagtcagcaattggcaatgacgccacaactccag
caagctatccgtttgttgcaactttctacgcttgaacttcaacaagaaattcagcttgct
ttggacaccaatcctctgcttgaacaagaggatccacatgaagaagtggatagccaggaa
ccccctgatactgaagtgatggacgcccgagaagcgctagaacagaaagagatgcctgaa
gaactcccactggataccagttgggatgaaatttactccgctggcacgctttcaggaaca
agcagtgattacaaaactgaggactttcccgtctatcagggagagacacatcagacgctg
caagattatctgatgtggcaggcagaattgacgccgtttaccgaaaccgattttgccatt
gccacgtcaatcatcgatgctattgatgacacaggctatctgactgtttctgtcgacgaa
atccttatcagtatcggtaatgacgaactggcgttggtagaagtcgaaaccgttctcaag
cgcatacagcattttgatccgattggtgtggctgcccgtgatttgcgggaatgcttgctt
atccagctttcaattttgctaccagaaactccacatctgaacgaagccaaactcattgtc
agcaaatatcttgaactgctgggcaatcgagacttccgtaatttattacgccagagcaaa
ttaaaagagaacgctctgaaaggagcgattgatattattcaatcactggagccgaaaccg
gggttggtagtcaataccagtgaatccgaatatgttattcccgatgtcttagtgcagaaa
gtcaatgaaagctggcaagtcaggctaaatgccgatagcattccccgtctgcgtatcaac
cagcaatatgcagcaatggggcaacagaccaataatgaaaatgacagtctgttcatccgc
agtaatttgcaggaagccaagtggctgataaaaagcttagaaagccgcaatgagacatta
ttgaaagtcgccatctgcattgttgaacggcaacaagacttttttgaacatggtgaggag
tacatgaaaccgctggtattggctgatattgcctatcagattgacatgcatgaatccacc
atctcccgcgtaacgacacagaaatacctgtatagtccacgagggatttttgaacttaag
tattttttctccagtcacgtcaatacagatagtggaggtgaagcctcttctaccgcaata
cgtgcgctggtgaaaaaaatggtcgcggcagaaaacccggctaagccactgagtgatagt
aaattgaccagtatactggctgaacaaggtattcaagtggcacgtcggactgtcgcaaaa
tatagagagtcgttatccatcccgccttcaaaccaacgtaaaaaactggtttga
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