Xenorhabdus hominickii: A9255_17995
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Entry
A9255_17995 CDS
T04538
Name
(GenBank) RNA polymerase-binding ATPase
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
xho
Xenorhabdus hominickii
Brite
KEGG Orthology (KO) [BR:
xho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xho03021
]
A9255_17995
Transcription machinery [BR:
xho03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
A9255_17995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
SNF2-rel_dom
Helicase_C
ResIII
DEAD
Cas3-like_C_2
AAA_34
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
AOM42283
UniProt:
A0A2G0QGE5
LinkDB
All DBs
Position
complement(3933695..3936604)
Genome browser
AA seq
969 aa
AA seq
DB search
MPFTLGQRWISDTESELGLGTVVALDARMVTLLFPASGENRLYARNDSPITRVMFNVGDT
VTSHEGWKLKIDDVQQDNGLLIYVGTRLDTEEENTCLREVFLDSKLTFNKPQDRLFAGQI
DRMDRFALRFRARKHQSEQFGLAESGLRGIRASLIPHQLHIANEVGKRHAPRVLLADEVG
LGKTIEAGMIIHQQLMAGRAERVLIIVPDSLQHQWLVEMLRRFNLRFSLFDDGRYTEALH
DSDNPFETEQLVICSLDFVRRNKQRFELLLEASWDLMVVDEAHHLEWSEKAPSREYQVIE
QLAEQIPSVLLLTATPEQLGQESHFARLRLLDPNRFHDYQAFIDEQQNYRPVADAVTLLL
SGKTLSDEQQNLIVELISEQDIEPLLKAANSHQDEESENARRELIAMLMDRHGTSRLLFR
NTRGGVKGFPHRELHEIKLPLPAQYQTAIKVSEIMGAKKSVEARAKDMLYPERIYQEFEG
ENATWWNFDPRVEWLLGFLTANRDEKVLVICAKAETALQLEQVLREREGIRSAVFHEGLS
LLDRDRAAAYFASEEEGAQVLLCSEIGSEGRNFQFANQLVMFDLPFNPDLLEQRIGRLDR
IGQSRDIKISVPYLENTAQSILLRWYHESLDAFEHTCPTGRPIYDKYYEVLLNFLAKPNE
QTGFNEFIAECRVHHEQLKQQLEQGRDRLLEMNSNGGEQGQQLAEKIAAQDNDTDLVSFA
LNLFDIIGINQEDHSDNIIALHPSDHMLVPDFPGLPKDGCSITFDRERALSREDTQFLSW
EHPIIRNGLDLILSGDTGSCAVSILKNKALPVGTLLVELIYVVEAQAPKHLQLTRFLPPT
PLRLLLDLKGTNLAPQVEFESFNRQLNAINRHNASKLVNAVQKEIHAILQQSEPLVEEQA
RELIEKSKKEADEALSAELSRLEALRAVNPNIRDDELEAIASEHKHLLLNLDQANWRLDA
IRLVVVSHQ
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atgccatttactcttggtcaacgctggataagcgatacagaaagcgaacttggattagga
acggtcgtggcgcttgatgcgcgcatggtgacgttgcttttccctgccagcggagaaaac
cgcctttacgcacgcaatgactcccccattacccgagtgatgtttaatgtgggtgatacc
gtgaccagtcacgagggctggaaactcaagatcgatgacgttcagcaagataatggcctg
ctgatctacgtcggtactcgtctggacactgaagaagaaaatacctgcctgcgggaagtt
tttctggatagcaaactgacgtttaataagccgcaggatcgtctgtttgccggtcaaatt
gaccgcatggatcgctttgcactgcgttttcgcgcccgtaaacaccagagcgaacaattt
ggtctggcagaaagtgggctgcggggcatccgtgccagtttaatccctcatcagctccat
attgccaatgaagtgggtaaacgccatgcacctcgtgtgttgctggctgatgaagttggt
ctgggtaaaaccattgaagccggcatgattattcatcagcaattgatggcaggtcgggct
gagcgtgtgctgatcatcgtacctgatagtctgcaacaccaatggttagtagaaatgctg
cgccgattcaatctgcgcttttcgctgtttgatgatggccgatataccgaagcgcttcac
gacagcgataatccatttgaaacagagcaactggttatctgttctctggattttgtgcgc
cgcaataagcaacgctttgaacttctgctggaagcgagttgggatttgatggtggtggat
gaagctcaccatctggaatggagcgaaaaagcaccaagtcgcgaatatcaggttatcgaa
caattagccgagcagatcccttctgttctgctactgacagcgacacctgagcagttaggc
caagaaagtcactttgcccgtctgcgcctgctagacccaaatcgttttcacgattatcag
gcattcattgatgaacagcagaattatcgtcccgttgcggatgccgtcacgttattgctg
tccggtaaaaccctgagtgatgaacagcaaaatctgattgtcgaactgatcagcgagcag
gatattgaaccgctgctgaaagccgccaacagtcatcaggatgaagagagcgaaaatgct
cgccgtgaactgattgccatgctgatggatcgtcacggtaccagccgactgctgttccgt
aatacccgtggtggtgttaagggcttcccacaccgtgaactgcatgaaatcaagttacca
ttgccagctcaataccaaacggcaatcaaggtttctgaaatcatgggggccaaaaaatcc
gtggaagcgcgcgccaaagatatgctctatccagagcggatctatcaggagttcgaaggg
gaaaatgccacatggtggaacttcgatccccgcgtagaatggctgctgggtttcttgaca
gcaaaccgtgacgagaaagtgctagtgatctgcgccaaagcagaaaccgctctgcaactg
gaacaagttctgcgtgaacgcgaaggtattcgcagtgccgtattccacgaaggtttatcc
ctgctggaccgcgaccgtgccgccgcttacttcgcctccgaagaagaaggggcacaagtg
ctgctttgttctgaaattggctctgaaggacgtaacttccagttcgctaatcagcttgtc
atgtttgacttgccatttaaccctgatttgctggaacagcgtatcggccgtttggaccgt
atcggtcaaagccgcgatattaagatcagcgtgccttatctggaaaatactgcgcaatcc
attctcttgcgttggtatcacgaaagtctggatgcctttgaacatacctgcccaacaggc
cgccccatctatgacaaatactatgaagttctgctgaatttccttgccaaaccgaatgag
caaactggcttcaatgagtttattgccgaatgtcgcgtacatcatgagcaacttaaacag
caattggagcaaggccgtgaccgtttgctggagatgaattccaacggtggcgagcaaggt
caacaactggctgaaaagattgcagcgcaagataacgataccgatttggtgagttttgcc
ctgaatctgttcgatatcatcggcattaatcaggaagatcacagtgacaatattattgcc
ctgcatccatccgaccatatgctggtacctgatttccccggattgccaaaagacggctgc
tccattacgtttgaccgtgaaagagcactctcccgcgaggatactcagttcctgagctgg
gaacatcccatcattcgcaatggcctggatttgatcctgtcaggggataccggaagctgt
gcagtttctatcctgaaaaacaaggcactgccagtcggtacgctgttggtcgagttaatt
tatgtcgttgaagctcaagcgccgaaacacctgcaattgacccgtttcttgccaccaaca
ccattgcgtctcttgttggatctgaaagggactaatctggctcctcaggtggagtttgaa
agtttcaaccgtcagctcaatgccatcaatcgccacaatgccagtaagctggtgaatgcg
gtgcagaaagaaattcatgctattttgcaacaatcagagcctttggttgaagagcaagca
cgtgaattgattgagaagtcgaagaaagaggctgatgaagcactgtcagcagagttgtca
cgtctggaagccctgagagcggttaatccgaatatccgtgatgatgaactggaagcgatt
gcatctgagcataagcatctgctgctcaatcttgatcaggctaactggcgactggatgcc
attcgtttggtggtcgtttctcaccaataa
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