Xenorhabdus hominickii: A9255_18075
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Entry
A9255_18075 CDS
T04538
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
xho
Xenorhabdus hominickii
Pathway
xho03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xho00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
A9255_18075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xho03400
]
A9255_18075
Enzymes [BR:
xho01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
A9255_18075
DNA repair and recombination proteins [BR:
xho03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
A9255_18075
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AOM42298
UniProt:
A0ABN4S7F9
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All DBs
Position
3954524..3957940
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AA seq
1138 aa
AA seq
DB search
MFRVYHSNQLDILKELMAILIGENPLSDPFGKDVILVQSPGMSQWLQIQLAEKLGIAANM
EFPLPATFIWQMFTQILADVPKEGAFSKDAMKWKLMRLLPTLLTETEFSALSHYLDQDID
KRKIHQLAGRIADLFDQYLVYRPQWLESWENGQLVDGLNSNQLWQKRLWSELTEYTRELQ
QPLWHRANLYRRFVSTLEEGSFRLESLPSRIFICGISALPPAYLQVFKALGQHIDIHLMF
TNPCQYYWGDIQSYAFLSKLNSRKPKHYKSNQLLERFKEPENATSLFNEEGEQNLNNPLL
ASWGKLGRDNLYLLSQLEPDSDVHAFVELEPDCILHQIQRDILNLEDYAQIGSTENTFQN
SLKKRPFDDADRSLTFHSCHSPQREVEVLQDQILHLLDDDPSLKPRDIIVMMADIDSYAP
YIQAVFGNAPDERYIPFAISDRKVRQAHPVLQAFITLLDLPQSRFTAEQVLALLEVPALA
NKFAIQEEGLRLLRRWVKESGICWGLDDDNIEALSLPATGQNTWRFGLTRMLLGYAMDSH
AGPWNGVLPYDESSGLAAELAGQLAEFLMELNLWRKVLSEEQRLVDWMAVCPQLLETFFE
SDDEIELVLALITQQWQKIIDNGLNAHYDESVPLVLLRDELALRFDDEKISQRFLAGSLN
FCTLMPMRSIPFKVVCLLGMNDGVYPRTIPPLGFDLMTDKAQRGDRKRRDDDRYLFLEAL
VSAEQSLYISYIGKSIRDDTECNPSVLVNELLDYVCQSFCQSGDEMLNVDDSAKRVKEHL
ISQHTRVPFAAENFLPDHYPQSYASEWLPAATQQGISVTDFCQPIAFDRSEIKEIALDEL
IRFYRHPVRAFFQQRLKVHFVIEEMELPEEEPFVLDNLQRYQFNQLLLSILIEEGSPESL
FHHLRASGGLPYGAFGEAYWMDQLESIQPLANKVREERTDSYPIDLHEQIGDVILTSKIN
QVQPDGILRWRPANLTANDGIQLWIEHLAYCFSGGTSESRMYGTIKGGKKEGNKLTECRF
LPLEQDEAEKYLSRMIEGYFQGMSVPLPLFCRSGWAWLVECFDKESQEIDFSEEAQHKAE
SKLMEQWLGVHDRTGESSDHYAQRAFRQVDQSLLERMKREVQSYLLPMARYSNGSLFK
NT seq
3417 nt
NT seq
+upstream
nt +downstream
nt
atgtttagagtttatcattcaaatcaactcgatattctcaaagagttgatggcgatattg
atcggggaaaacccactttctgacccatttggcaaagacgttattctggttcaaagccct
ggaatgtctcagtggttgcagattcaactggcagagaaactcggcattgcagccaacatg
gaatttccactaccggcgacctttatctggcaaatgtttacgcaaatattggctgatgtt
cccaaagagggagccttcagcaaagatgccatgaaatggaagttgatgaggctgttgccg
actctgttaacagaaacggaattttcggcgctcagccattatctagaccaagatattgat
aaacgcaagatccatcaacttgctggccgaattgccgatctatttgaccaatatctggtt
tatcgtccgcaatggctggaaagttgggaaaacggtcaattagttgatgggttgaacagc
aatcaattgtggcaaaaaagattatggtctgaactgacagaatatacccgcgagttacag
caacccttgtggcaccgagccaatttataccgtcgatttgtttcaacgttggaagaaggc
agctttcgattggaaagtttaccttcacgtatctttatctgcggaatatcagcattgccg
ccagcttatttgcaggtttttaaagcattagggcaacatattgatattcatctgatgttt
actaacccgtgccaatattattggggggatatccaaagctatgcgtttctttccaagtta
aatagccggaaaccaaaacattataaaagtaatcagcttctggagagatttaaagagcca
gaaaatgcaacgtcactttttaatgaagagggcgagcaaaacctgaataacccactactt
gcctcttggggaaaattggggagagataacctttacctgctgtcacagttggagccagat
tctgatgtacatgcttttgttgaattggaacccgattgtatcctgcatcaaatccagcga
gatatcctgaatcttgaagattatgcccagattggctctacggaaaacacctttcaaaat
agtctgaaaaagcggccatttgatgatgcagatcgttcattgacttttcattcatgtcat
agtccacagcgagaggtggaagtgttgcaggatcagatccttcatttattggatgatgat
ccctcactgaaaccgagggatatcatagtgatgatggctgatatagacagttatgcaccc
tatattcaggctgtttttggcaacgctccggatgagcgttatatcccttttgctatttct
gatcgtaaagttcgtcaagctcatcctgtcttacaggctttcattaccctgttggattta
ccacagagtcgatttaccgctgagcaagtactggcattattggaagtaccagctttagcc
aataaatttgctattcaggaagaagggctgcgtttgctgcggcgttgggtgaaagaatcc
gggatttgctggggattggatgatgacaatattgaagcattatctttgcctgcaactggg
caaaatacttggcgttttggtttgactcgaatgttattgggttatgcgatggacagccac
gctggtccgtggaatggtgttttgccatatgatgaatccagcggtcttgctgccgagtta
gcgggtcaactggctgaatttttaatggaactaaacctttggcgtaaggttttaagtgaa
gagcagcggttggttgattggatggcagtgtgcccgcaattgctggaaacttttttcgaa
tcggatgatgaaattgaattggtgctggcactcattactcagcaatggcaaaaaatcatt
gataatggccttaacgctcattatgacgaaagtgttcctttagtgctactgcgtgatgaa
ttagcattgcgttttgatgatgaaaagataagccagcgttttctggcggggtcacttaat
ttttgtaccttgatgccaatgcgttccattccttttaaggtcgtttgcttgttgggaatg
aatgacggggtttatccgcgcacaataccgccgcttgggtttgatcttatgacagacaaa
gctcagagaggggatagaaaacgacgcgatgatgatcgctatctttttttagaagcattg
gtatcggctgagcagtctctttatatcagttatatcggtaaatcgattcgagatgatact
gagtgtaacccatccgtgttggtcaatgagttactggattatgtttgtcaaagtttttgc
caatccggtgatgaaatgttgaatgttgatgacagcgcaaagagggtcaaagaacacctg
atttcacagcatacgcgtgttccttttgcagcggaaaatttcctgcctgatcactatcca
caaagttatgcctcagaatggttgccagcggcgacgcagcaagggatatcagttacggat
ttctgccagccgattgcgtttgaccgtagtgaaataaaagaaattgcactagatgaattg
atccgtttttatcgccatcctgtccgggcgtttttccagcaacggctaaaagtgcatttt
gttattgaagagatggagctgcctgaagaagaaccttttgtactggataatttgcagcgc
tatcagtttaaccagcttctgttaagtattttaatagaagaggggtcacctgaatcgttg
ttccatcacctccgggcatcgggtgggttgccatatggggcgtttggtgaagcgtattgg
atggatcaattggaatccatacaaccattggcgaataaagtgcgtgaagaaagaactgac
tcctatcccatcgatttacacgagcaaattggcgatgtgatattgacgagcaaaatcaat
caggttcagcccgatggaattttacgttggcgtccagcgaacttaacggccaatgatggt
atccaactatggattgaacatcttgcctattgcttttcaggtggtacgagtgaaagccgc
atgtatggaacgataaaaggggggaaaaaagagggtaacaagctgacagagtgtcgtttt
ttgccactggaacaggatgaggcggaaaaatacctaagtcggatgatagaaggctatttt
caaggaatgtctgtccctcttcccctgttttgtcgaagtggctgggcatggttagtggaa
tgctttgacaaggaaagtcaggaaattgatttcagtgaggaggctcaacacaaagctgaa
agcaagttgatggagcaatggctaggagtacatgacagaacaggagaaagcagcgatcac
tatgcacagcgagctttccggcaagttgatcaatcacttttggagcgtatgaagcgcgag
gtccagagctatttgttgcctatggctcgctattcaaatggctcgttattcaaataa
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