Xenorhabdus hominickii: A9255_18340
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Entry
A9255_18340 CDS
T04538
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
xho
Xenorhabdus hominickii
Pathway
xho03030
DNA replication
xho03430
Mismatch repair
xho03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xho00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
A9255_18340
03430 Mismatch repair
A9255_18340
03440 Homologous recombination
A9255_18340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xho03032
]
A9255_18340
03400 DNA repair and recombination proteins [BR:
xho03400
]
A9255_18340
Enzymes [BR:
xho01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
A9255_18340
DNA replication proteins [BR:
xho03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
A9255_18340
DNA repair and recombination proteins [BR:
xho03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
A9255_18340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AOM42344
UniProt:
A0A2G0QGJ0
LinkDB
All DBs
Position
4016316..4019798
Genome browser
AA seq
1160 aa
AA seq
DB search
MIEPRFVHLRVHSDYSMIDGLAKTSPLVKKVAKLGMPAFAITDFTNLCGLVKFYGSAHGA
GIKPIIGADFLVENDLLGDEHSHLTVLARNNEGYQNLTLLISEAYQKGYGAIGPTIRQEW
LTKYKTGLILLSGGRMGDVGKFLLRGNRAMVDQCLDFYQEHFPDSYYLELIRTGRQDEEN
YLHAAVELASEKNLPVVATNDVCFLESEDFDAHEIRVAIHDGYTLVDPKRPKNYSPQQYL
RTEQEMCEIFSDIPEALQNSVEIAKRCNVTIRLGEYFLPQFPTGDMSTEDFLVERSKQGL
EERLAFLYPDPAMRVEKRSEYDERLDIELKVINQMGFPGYFLIVMEFIQWSKDNGVPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERISMPDFDVDFCMEKRDQVIDHVAD
MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMTLEKAFAAEPQ
LPEIYEADEEVKALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFAPIYCDPEGLNPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIINWVLEMVNARRAEKGLEPIDIAAIPLDDQKSFDML
QRSETTAVFQLESRGMKDLIKRLRPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREE
ISYPDVEWQHESLKPVLEPTYGIILYQEQVMQIAQVLAGYTLGGADMLRRAMGKKKPEEM
AKQRSVFESGAISQGVDGELSMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTEKVVGLVDECWRMGLKVLPPDINSGLYHFHVNDEGEIVYGIGAIKG
VGEGPIEAIIEARQTGGHFKELFDLCARVDIKKLSRRVMEKLIMSGAFDRLGPHRAALMS
SLEDALKAADQHAKAEAIGQTDMFGVLAEEPEEVERSYASTPKWPEQVVLDGERETLGLY
LTGHPITSYLKEIERYTNGLRLKDVNPTPRGQVTTVVGLVLVSKVLTTKRGNRIGISTLD
DRSGRLEIMLFSDALERYQHLLEQDKILIATGQVSFDDFSGGLKMTVRELMDISEAREKF
ARGLAISLSDRQIDEQFLNRLRGVLEPHRSGTIPVHLYYQRVDARARLRFGATWRITPTD
TLLTDLRTLLGNEQVELEFD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atgatagaaccacgttttgtgcacttacgtgttcacagcgactattcaatgattgatggc
ttggcaaagacgagtccattggtgaaaaaagttgccaaattgggtatgccagcttttgcg
attacggattttaccaacctttgtggattggtaaaattctatggcagtgcccatggagcc
ggaattaagccaattattggtgctgattttcttgtggaaaatgacttgttgggggatgag
cattcccatctgacagtccttgcccgcaataacgaaggttatcaaaacctgaccttgttg
atctctgaagcctatcaaaaaggctatggcgcgataggcccgactatcagacaggaatgg
ctgacaaaatacaagactgggttgatcttgttgtcgggtggacgcatgggcgatgtgggt
aaattcctgttgcgtggtaatcgtgcgatggtggatcaatgcctcgacttttatcaggaa
cattttccagacagctactaccttgaattgatccgtactgggcgtcaggatgaagaaaat
tatcttcatgcggctgtagagttggcatcagaaaagaatttacccgttgtagcaaccaat
gacgtctgttttctggagagtgaagacttcgacgcacatgagatcagagttgccatccat
gatggatatacgctggttgatccaaaacgtccaaaaaattacagtcctcagcaatatctg
cgcactgaacaggaaatgtgtgagattttctctgacattcctgaagcgctgcaaaatagc
gtagaaattgctaaacgctgtaatgtcactatccgtcttggtgaatatttcttgccacag
tttcctactggggatatgagtaccgaagactttctggttgaacggtcgaaacagggtctg
gaagagcgtttggcttttctttatcccgacccggcgatgagagtcgagaaacgctccgaa
tacgacgaacgtctggatattgagctgaaggttattaaccagatggggtttcctggttac
ttcctgatcgtgatggaatttatccagtggtcgaaagacaacggcgtccctgttgggcct
ggtcgtggttccggtgcaggttctctggtggcttacgccttgaaaatcaccgatctcgat
ccgctggaatttgacttgctgttcgaacgttttctcaaccctgaacgtatttccatgccc
gactttgatgtcgatttttgtatggaaaaacgcgatcaggtaattgatcacgttgccgat
atgtatgggcgagatgctgtatcccagatcattacctttggtacgatggcggctaaagcg
gttatccgtgatgtggggcgagttcttggccacccttacggttttgttgatcgaatatca
aagctggttccccccgatccgggcatgacgctggagaaagcgtttgcggctgaaccccaa
ttacctgaaatttacgaagccgacgaagaagtcaaagcgctgattgatatggcgcgtaaa
ttggaaggtgtcacccgtaatgccggtaaacatgctggtggggtcgttattgcaccaacc
aaaatcactgattttgctccgatttactgtgatccggaggggctgaacccggttacccag
tttgacaaaaacgatgtcgaatatgcggggctggttaagtttgacttccttggtctgaga
actctgaccattatcaactgggtactcgaaatggtgaatgcccgccgtgccgagaagggg
ctggagccgattgatattgcggctatacctctggatgatcagaaaagtttcgatatgcta
cagcgctccgaaacgacggcggtgttccagcttgaatcccgtggcatgaaagatctgatt
aaacgtctgcgtccagattgctttgaggacatgattgcattggtggcattgttccgtccg
gggccgttgcaatccggcatggtagataattttatcgaccgtaaacatggaagggaagag
atctcctatcctgacgtcgaatggcaacacgaatccttaaaacctgttctggagccaaca
tatggcatcattctgtatcaagaacaggttatgcagattgctcaggtattggcgggttat
accctcggtggtgcagatatgctccgtcgtgcaatgggtaagaaaaaaccggaagaaatg
gccaagcaacgctcagtgtttgaatcgggggcgataagtcagggcgttgatggcgaactt
tccatgaaaatcttcgatttggtggaaaaattcgcgggttatggctttaacaaatctcac
tccgcagcttacgcattggtttcttatcagactttatggctgaaagcgcattatccggca
gaattcatggcggccgtgatgacggcggatatggataacactgaaaaagtggttgggctg
gtggatgaatgttggcggatggggctgaaggtattgcctccagatatcaacagcgggttg
tatcatttccatgtcaatgatgaaggtgaaatcgtttacggcattggcgcaatcaagggg
gtgggtgaagggccgattgaagctattatcgaagcccgccaaacaggagggcacttcaag
gaactgttcgacttgtgcgcacgtgttgacatcaaaaagctaagccgtcgtgtgatggaa
aagctgattatgtcaggtgccttcgatagattggggccacaccgtgccgcgttgatgtct
tctttggaagatgcgttgaaagcggctgatcaacacgctaaagctgaagctattggtcaa
actgatatgtttggtgtgttagccgaagaaccagaagaggtcgaacgttcgtatgccagt
acgccgaaatggccggaacaggtggttttggatggtgaacgagaaaccttggggctatat
ctgacaggccatccgatcacaagttatttgaaagagattgaacgatatacgaatgggttg
cgtctaaaagatgtgaacccgacacctcgtggtcaagtaacgactgtggtaggtttggta
ctggtatccaaggtattgacaaccaagcggggtaaccgaattggtatcagtacattggat
gatcgctccggacggctggaaatcatgctgttttctgatgccctggaaaggtatcaacat
ttattggagcaggacaaaattttaattgctaccggacaagtcagctttgatgacttcagc
ggtggccttaaaatgacagttcgtgaattaatggacattagtgaggcgcgtgaaaaattt
gcacgtgggcttgctatctcgttgtcagacaggcaaattgatgagcaatttttgaaccgt
cttcgtggcgtactggagccacaccgttcaggtacgataccggttcatctttattaccag
cgggtagatgcccgtgcccgtttacgattcggtgcaacatggcggataacgccaacggat
acccttttgacagatctgcgaactctgctgggtaacgagcaggtagaattagaatttgac
taa
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