Xenorhabdus hominickii: A9255_18900
Help
Entry
A9255_18900 CDS
T04538
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
xho
Xenorhabdus hominickii
Pathway
xho03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
xho00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
A9255_18900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xho03400
]
A9255_18900
DNA repair and recombination proteins [BR:
xho03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A9255_18900
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
A9255_18900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
AAA_16
nSTAND1
RsgA_GTPase
DnaJ_CXXCXGXG
AAA_25
AAA_23
nSTAND3
NACHT
Viral_helicase1
cobW
ScfRs
Motif
Other DBs
NCBI-ProteinID:
AOM42442
UniProt:
A0A2G0Q4M7
LinkDB
All DBs
Position
complement(4120349..4123180)
Genome browser
AA seq
943 aa
AA seq
DB search
MDNIEVRGARTHNLKNINLVIPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC
PEHDITLAAQTVSQMVDNVLALPEGQRLMLLAPVVKERKGEHTKLLDNLATQGYIRARID
GEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLAQRLSESFETALELSGGTAVIANMDDA
EVEELVFSANFACSVCGYSMSELEPRLFSFNNPAGACPTCDGLGVQQFFDPERVVQNGDI
SLAGGAIRGWDRRNFYYFQMLRSLSEHYKFDIETPFNQLTPDIRKIVLYGSDKESIEFKY
TNDRGDVTVRNHPFEGVLHNMERRYKETESSAVREELAKYISNRSCISCDGTRLRKEARY
VFIENTTLPQISDFSIGHAMEFFQNIKLSGQRAKIAEKVLKEIRDRLKFLVNVGLNYLAL
SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLETLLHLRNLGNT
VIVVEHDEDAIRAADHIIDIGPGAGVHGGEIVAEGNITDIMESEKSLTGKFLSGERQIGI
PEQRVPANPNKILKLIGAKGNNLKKVTLKLPVGLFTCVTGVSGSGKSTLINDTLFPIAQR
QLNGATNINPAPYMDIEGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFSGVPE
SRARGYTPGRFSFNVKGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY
KGKNINEVLSMTIEEAREFFDAVPALARKLQTLIDVGLSYIRLGQSATTLSGGEAQRVKL
ARELSKRGTGQTLYILDEPTTGLHFADIQQLLSVLHQLRDQGNTIVVIEHNLDVIKTADW
IVDLGPEGGSGGGEILVSGTPEEVAQCEKSHTARFLKPILERD
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atggataacatcgaagttcggggcgcccgcacccataatctcaagaatatcaatttagta
attccccgtgacaagctgatagtcattactggactgtcaggctccggtaagtcatctctg
gctttcgatacactgtatgcggaaggccagcgtcgctatgtggaatcgctctctgcgtat
gcccgtcagtttttgtcactgatggaaaaaccggacgtcgatcatatcgaagggctatcc
cctgccatttctattgagcaaaaatctacttctcataatccgcgatctactgttggtaca
atcaccgaaatccatgattatctccgcctgctgtttgctcgtgtgggtgaacctcgctgc
cctgaacacgatatcacgctggcagcgcaaacggtcagtcagatggtggataatgttcta
gctttgccggagggacaacgtctgatgctattggctcccgtggtcaaagaacgtaagggc
gaacatactaagctgctggataatctcgctacacaaggttatatccgtgcccgtattgat
ggcgaagtgtgcgatttatccgatcctcctaaacttgaattacagaaaaaacataccatt
gaagtagttgtcgaccgtttcaaagtacgtgatgatctcgctcaacggctgtctgaatca
ttcgaaactgcattggagctatccggtggtactgctgtcattgccaatatggatgatgca
gaggtagaagagttggtcttttctgccaattttgcctgttctgtctgtggctatagtatg
agcgaactagagccgcgtctgttttctttcaacaatcccgccggtgcttgcccaacatgt
gatggtttaggcgtccagcaatttttcgatcctgaacgtgttgtccaaaatggagatatc
tctcttgcgggtggtgcaatccgtggttgggatcgccgtaatttctattacttccagatg
ttgagatcgctgtcagagcattacaaatttgatattgaaactccatttaatcagttaact
cctgacattagaaaaatagtgctatacggctcagacaaagagtccatcgaatttaaatat
accaatgatcgtggcgatgtaaccgtccgtaatcatccgtttgaaggtgtgctgcataac
atggaacgccgctataaagagacggaatcctctgctgtacgtgaagagttagcaaaatat
atcagcaatcgttcttgtatctcttgtgatggaacccgattgcgcaaagaagcacgttat
gtctttattgaaaatactacgttgccgcaaatctctgatttcagcatcggtcatgcaatg
gagtttttccaaaatatcaagttgagtgggcaacgcgctaaaattgccgaaaaagtcctg
aaagagatccgtgatcgactgaaatttctggtgaatgtcggcttgaattatctggctctt
tcccgttcagcggaaactctttctggtggtgaagcccagcgcattcgtttagccagtcag
attggggcaggccttgtcggtgtaatgtatgtgctggatgaaccttccattggccttcat
caacgggataatgagcgtttgctggaaacgttgctgcatctgcgcaatctgggcaatacc
gttattgtggtcgaacatgatgaagatgccatccgtgcagccgaccatattattgatatc
gggcctggtgctggtgtacatggcggtgagattgttgccgaaggcaacatcactgatatc
atggagagtgagaaatctctcaccggaaaattcctgagtggagaacgtcaaattggcatt
ccagaacagcgcgtacctgccaatcccaacaaaatactgaaactaattggggcaaaaggc
aataacctgaaaaaggtgacattaaaactgcctgtcggcctgtttacctgtgtcaccggg
gtttccggttcgggtaaatcaacattgatcaacgacacactattccctatcgcacaacgt
caactaaacggagcgacgaacattaatcctgcgccttatatggacatcgaaggattagag
cattttgacaaagtgatcgatatcgaccaaagcccgataggcagaacaccccgttccaac
cctgccacttatactggcgtatttactccggtaagggagttattttcaggtgtcccagaa
tcccgtgcgcgtggttatacaccgggacgtttcagcttcaacgttaaaggcggacgctgt
gaagcctgtcagggcgatggggtaattaaagttgagatgcatttcttgcctgatatttat
gtgccttgtgatcaatgtaagggcaagcgttataaccgtgaaacgctggaaatcaaatat
aaaggaaaaaatatcaatgaagtactgagcatgaccatcgaagaggcccgagagttcttc
gatgccgttccagcccttgcccgcaagttacaaaccttgatagatgttggcctttcctat
attcgtctggggcaatcagcaacgacactttcagggggtgaggcccagagggtaaaactc
gcgagagaattatccaaacggggtacaggtcaaacgctttatattcttgatgaaccgaca
accggcctacatttcgcggatattcagcagttattgtccgttctgcatcagctacgggat
cagggaaataccattgttgtaatcgagcataatctggatgtgatcaaaactgccgattgg
attgtcgatcttggccctgaaggcggtagtggtggcggtgaaatattggtatcgggaaca
cccgaagaagtcgctcagtgcgagaagtctcatactgcccgttttttgaaaccaatactt
gaacgtgattaa
DBGET
integrated database retrieval system
