Xanthomonas hortorum: XJ27_00345
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Entry
XJ27_00345 CDS
T05082
Name
(GenBank) circadian clock protein KaiC
KO
K08482
circadian clock protein KaiC
Organism
xhr
Xanthomonas hortorum
Brite
KEGG Orthology (KO) [BR:
xhr00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
XJ27_00345
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
nSTAND3
AAA_16
RecA
AAA_22
MEDS
IstB_IS21
NACHT
NPHP3_N
AAA_14
AAA_24
DnaB_C
AAA_29
SLFN-g3_helicase
AAA_19
AAA_5
GvpD_P-loop
Zeta_toxin
AAA_30
AAA_18
AAA_7
TrwB_AAD_bind
PhoH
TIP49
Rad51
PAXNEB
Motif
Other DBs
NCBI-ProteinID:
ASW44587
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Position
85936..87450
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AA seq
504 aa
AA seq
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MGNLKPTIAKRITTGTEGLDTILRGGLPPNRLYLLEGQPGSGKTTLALQFLLDGAARGES
CLYVTLSETIDELNEVAASHDWTLDALNIFELASAEAFLGDGRQQSILHPWEMELDGTIK
LIQSEVDRIKPTRVVFDSLSELRLLAQDPLRYRRQVLALKQFFSPRNITVFLVDDLTGEN
GQRDAHLHSLCHGVISLERMTLDFGAARRRMQVQKLRGVDFVAGYHDLTITTGGMRIYPR
LIASDHHVPFIGDAVSSGVERIDALLYGGPLRGTSTLLTGPAGSGKTNIALQYVAAACER
GEHCCILEFDERTGTLLTRAESLGMDLRKHLDSGLLELHQMDPAELTPGEFAWAVRGSVE
ERQCRVLVIDSLNGYLSSMPQEKQLMLQMHELLSYLNQSGVTTFLVNPQHGLVGTMSTGN
LNISYLADTVVLFRFFEAQGRIRKALSVIKNRSGAHEDSIRELRIGSGGIHLSEPLEKFH
GVLTGTPQFVGDDAPLLDRPLDHL
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgggaaatttgaagccgacgatcgcaaaacgcatcaccacgggtaccgaggggttggat
accatccttcgcggtggcttgccacccaatcgcctgtatctgctggagggccagccgggg
tcgggcaagaccacgctggcgttgcagtttctgctcgacggcgcggccaggggcgagagc
tgcctgtatgtgaccttgtcggagaccatcgacgagctcaacgaggtggcggcttcgcac
gactggacgctggatgcgctgaatatcttcgagctggcatcggccgaggcgtttctgggc
gacgggcgccagcagtcgatcctgcatccatgggaaatggaactggacggcaccatcaag
ctcatccagtccgaagtggaccggatcaagccgacccgtgtggtgttcgattcgctgtcc
gagttgcgcctgctggcgcaggatccgctgcgctaccggcggcaggtgttggcgctcaag
cagttcttttctccgcgcaacatcaccgtgtttctggtggacgatctcaccggcgaaaat
ggtcagcgcgatgcgcatctgcacagcctgtgccatggcgtgatctcgctggagcgcatg
acgctggatttcggcgcggcacgtcggcgcatgcaggtgcagaaattgcgtggtgtggat
tttgtcgccggctatcacgacctgaccatcaccaccggtggcatgcgcatctacccgcgc
ctgatcgcctccgatcaccacgtgccgttcattggcgatgcggtgtccagcggcgtcgag
cgcatcgatgcgctgctgtatggcgggccgctgcgtggcaccagcacgctgctgaccggg
ccggccggctcgggcaagaccaatatcgcgctgcagtacgttgccgctgcctgcgagcgc
ggtgagcactgctgcatcctggagttcgatgagcgcaccggcaccttgctgacgcgcgcc
gaaagcctgggcatggatctgcgcaagcatctggactcgggtctgctggaactgcatcag
atggacccggccgaactgacaccgggcgagttcgcctgggcagtgcgtggcagtgtcgaa
gaacgtcaatgccgcgtgttggtgatcgacagcctcaacggctatctgtcgtcgatgccg
caggaaaagcagctgatgctgcagatgcacgagctgttgtcgtatctcaaccagagcggc
gtgaccacgtttctggtcaacccgcagcatggtctggtgggcacgatgtcgaccggcaat
ctcaatatttcgtacctggccgataccgtcgtcctgttccgcttcttcgaagcgcaagga
cgcattcgcaaggccttgtcggtgatcaagaatcgcagcggcgcgcatgaggattcgatc
cgtgagttgcgcatcggtagcggcgggatccatttgagcgagccgctggagaaattccac
ggtgtgctgaccggtactccgcaatttgtcggagacgatgcgccgttgctggatcgtcca
cttgaccacctgtga
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