Xanthomonas hortorum: XJ27_00615
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Entry
XJ27_00615 CDS
T05082
Name
(GenBank) ligand-gated channel
KO
K02014
iron complex outermembrane recepter protein
Organism
xhr
Xanthomonas hortorum
Brite
KEGG Orthology (KO) [BR:
xhr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xhr02000
]
XJ27_00615
Transporters [BR:
xhr02000
]
Other transporters
Pores ion channels [TC:
1
]
XJ27_00615
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
ASW44634
LinkDB
All DBs
Position
complement(155269..157335)
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AA seq
688 aa
AA seq
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MHPRLASSFRRSTLTLALTSLLTPALAMAEDAPAPADPQTPPSSDTRHDATHSSGRHIKD
LDKVVVTASPLRDAAGELSRPVEVLAGERLDEVRSESLGETVSSLPGVQSSNFGPGVGRP
IIRGLDGPRVAVLRDGLSTQDVSTVSQDHSPAIEPFLANQIEVLKGPSTLLYGSGAIGGV
VNVVDGRIAETPVDGFSGRAEVRFDGGDKDGNTDMFRVDAGNGSGLSIHADGVYRNQNDY
DTPQGRQANSWIDSKVGSIGASLSGDWGFVGLSASRFRDNYGNPGEPGDLSIGERGVSLK
LQQDRYDLKGGLTDPWGEGSALRYSFGHTDYAHTEFEGEEVGTVFTKRANEGRVEASFTF
SGGWQTAFGLQGSDTTFQAVGEESFVPKTDTRSLGVFGVARNSWDRVTAELGARVDKVKY
QTDIGVDRDFTPTSFSLSGGFRFNEQWRLTANLDHAERAPAEEELFANGPHIATLAFEIG
DANLKTEKANQAELGLNFQNEWVDAKVAAYYNRYNDFVYIVDTGNQWFNAEDNDFLPIRQ
WTQADAIFHGFEGEATFHLANNDTGAWDLRVFGDTVRARLNDGGNLPRIAPGRVGAQMRW
NADQWRASLGATRTMKQDKIAVNETATDGYTFVDAHLAYHVDRGSNAWEVFLDGNNLTNQ
DARVHTSFLKDDVMLPGRSASFGVRMFF
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgcatcctcgcctcgcttcctcgtttcgccgctccacgctcacgctggccctgaccagc
ctgctgacccctgccctggccatggccgaggacgcgccagccccggccgacccgcagacc
ccgcccagttcggacacgcgccacgacgccacccattccagcggccgccatatcaaggac
ctggacaaggtggttgtcaccgccagcccgctgcgcgatgcggccggcgaattgagccgc
ccggtcgaagtgctggccggcgagcgtctggacgaagtgcgtagcgagagcctgggcgaa
accgtgtccagcctgcccggcgtgcagagttccaacttcggccccggcgtcggccggccg
atcatccgtggcctggacggcccgcgcgtggcggtgctgcgcgacggcctgtccacccag
gacgtatcaacggtcagccaggatcactcgccggcgatcgagccattcctggccaaccag
atcgaagtgctgaagggtccctccaccctgctgtacggctccggcgcgatcggcggcgtg
gtcaacgtggtcgacggacgcattgccgaaactccggtggacggcttcagcggccgcgcc
gaagtgcgcttcgacggcggcgacaaggacggcaacaccgacatgttccgcgtcgatgcc
ggcaatggcagcgggctgtcgatccatgccgacggcgtgtaccgcaaccagaacgattac
gacaccccgcaagggcgccaggccaactcctggatcgactccaaggtgggctcgatcggc
gcctcgctgtccggcgactggggctttgtcggcctctcggcctcgcgcttccgcgacaac
tacggcaatcccggcgagccgggcgatctgtcgatcggcgagcgcggcgtgtcgttgaag
ctgcagcaggaccgctacgacctcaagggcgggctgaccgatccgtggggcgaaggcagc
gcgttgcgttacagcttcggccacaccgattacgcgcacaccgagttcgaaggcgaagaa
gtcggcaccgtgttcaccaagcgggcaaacgaaggccgcgtggaagcctccttcaccttc
agcggcggctggcagaccgcgttcggcctgcagggcagcgataccaccttccaggcagtg
ggcgaagaatccttcgtgcccaagaccgatacgcgctcgctcggcgtgttcggggttgcg
cgcaatagctgggatcgcgtcaccgccgaactcggcgcacgcgtggacaaggtcaagtac
cagaccgacatcggcgtggaccgcgacttcaccccgaccagtttctcgctcagcggcggt
ttccgcttcaacgaacaatggcgcttgaccgccaacctcgaccacgccgaacgcgcgccg
gccgaagaagagctgttcgccaacggcccgcatatcgccacgctggccttcgagatcggc
gatgcgaatctgaagaccgaaaaggccaaccaggccgagctgggcctgaacttccagaac
gagtgggtggatgccaaggtcgccgcgtactacaaccgctacaacgacttcgtctacatc
gtcgacaccggcaaccagtggttcaacgccgaagacaacgactttctgccgatccgccag
tggacccaggccgacgccatcttccacggtttcgaaggcgaggccaccttccatctggct
aacaacgacaccggcgcctgggacctgcgcgtgttcggcgacaccgtgcgtgcgcgcttg
aacgatggcggcaacctgccgcgtatcgccccgggccgtgtcggcgcgcagatgcgctgg
aatgccgaccaatggcgtgcctcgctcggtgccacccgcaccatgaagcaggacaagatc
gccgtgaacgaaaccgcgaccgacggctatacgttcgtcgatgcgcatctggcctaccac
gtggaccgcggcagcaatgcgtgggaagtgtttctggatggcaacaacctgaccaatcag
gacgcacgcgtgcacacctccttcctcaaggacgatgtgatgctgcctggccgcagtgct
tcgtttggcgtgcggatgttcttctga
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