Xanthomonas hortorum: XJ27_03260
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Entry
XJ27_03260 CDS
T05082
Name
(GenBank) Fis family transcriptional regulator
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
xhr
Xanthomonas hortorum
Pathway
xhr02020
Two-component system
xhr02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
xhr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
XJ27_03260
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
XJ27_03260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xhr03000
]
XJ27_03260
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
xhr02035
]
XJ27_03260
Transcription factors [BR:
xhr03000
]
Prokaryotic type
Helix-turn-helix
Other families
XJ27_03260
Bacterial motility proteins [BR:
xhr02035
]
Flagellar system
Flagellar assembly proteins
Others
XJ27_03260
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
FleQ
Sigma54_activ_2
HTH_8
AAA_5
AAA_16
HTH_50
AAA
TIP49
AAA_7
bpMoxR
MCM
Motif
Other DBs
NCBI-ProteinID:
ASW45105
LinkDB
All DBs
Position
complement(788806..790290)
Genome browser
AA seq
494 aa
AA seq
DB search
MSESRILLIDSDAVRAERTVSLLEFMDFNPRWVTDGADINPGRHRHDEWMAVMVGSAQDA
AQADKFFDWLADAKLPPPVLLMEGSPSAFAQTHGLHEANVWTLDTPLRHAQLEALLRRAS
LKRLDAEHQAGVQQDTGPTGNSEAVTRLRRLIDQVAAFDTTVLVLGESGTGKEVVARAIH
QHSPRRDGPFVAINCGAIPPDLLESELFGHEKGAFTGALSTRKGRFEMAEGGTLLLDEIG
DMSLPMQVKLLRVLQERSFERVGGGQTIRCNVRVIAATHRNLETRISDGQFREDLFYRLN
VFPIEMPALRERVDDLAILVQTIAGQLARTGRGEVRFADEALQALRSYDWPGNVRELTNL
VERLAVLHPGGLVRVQDLPARYRGDFAAATALELPPEPALVAAPAEVSALPSNVVTLQPK
SATTEPATASSLPDDGIDLRGHMANIELALINEALERTQGVVAHAAQLLGLRRTTLVEKL
RKYGIDREQTELAN
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagtcccgcattctgctgatcgacagcgatgccgtgcgcgccgagcgtaccgtg
tcgctgctcgagttcatggacttcaatccacgctgggtcaccgacggcgccgacatcaat
cctggccgtcatcgccacgatgagtggatggcggtaatggtgggctcggcgcaggatgct
gcacaggccgacaagttcttcgactggctggccgatgccaagctgccgccaccggtgctg
ctgatggaaggcagcccgagcgcgttcgcgcagacgcacgggctgcacgaagccaacgtc
tggacgctggacacgccgctgcgtcacgcgcagctggaagccttgttgcgccgtgccagc
ctcaagcggctggatgccgagcatcaggccggcgtgcagcaggacaccggcccgaccggc
aacagcgaggcggtgacccgtctgcgccgcttgatcgaccaggtggcggcgttcgacacc
accgtgctggtgctgggcgaatcgggcaccggcaaagaagtcgtcgcgcgcgccatccac
cagcactcgccacggcgcgatgggccgtttgtggcgatcaactgcggcgcgattccaccg
gacctgctggaaagcgaactgttcggccacgaaaaaggtgcctttaccggcgccctgagc
acccgcaagggccgcttcgaaatggccgagggcggcaccctgctgctcgatgaaatcggc
gacatgagcctgccgatgcaggtgaagctgctgcgcgtgctgcaggagcgcagcttcgag
cgcgtgggcggtggccagaccatccgctgcaacgtgcgcgtgatcgccgccacccaccgc
aatctggaaacgcgcatcagcgatggccagttccgcgaggatctgttctatcgcctcaac
gtgtttcctatcgaaatgccggcgctgcgcgaacgcgtggacgacctggccattctggtg
cagaccatcgccgggcaactggcgcgcaccgggcgcggcgaagtgcgctttgccgacgaa
gccttgcaggcgctgcgcagctacgactggccgggcaacgtgcgcgagctgaccaatctg
gtggagcgccttgcggtgctgcacccgggcggtctggtgcgcgtgcaggatctgccggca
cgctatcgcggcgattttgccgcagccacggcgcttgaacttccgcccgagccagcattg
gttgctgcacccgcagaggtcagcgcattgccgagcaatgtggtgacgttgcagcccaaa
tcggccaccaccgaaccggccaccgcgtccagcctgcccgacgatggcatcgacctgcgt
ggccatatggccaacatcgaactggcgctgatcaacgaggcgttggaacgcacccagggc
gtggtagcgcatgcagcgcagctgctcggcctgcgccgcactacgttggtagaaaaattg
cgcaagtacggcatcgatcgcgagcaaaccgagctggcgaactag
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