Xanthomonas hortorum: XJ27_04730
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Entry
XJ27_04730 CDS
T05082
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
xhr
Xanthomonas hortorum
Pathway
xhr00020
Citrate cycle (TCA cycle)
xhr00190
Oxidative phosphorylation
xhr00650
Butanoate metabolism
xhr00720
Other carbon fixation pathways
xhr01100
Metabolic pathways
xhr01110
Biosynthesis of secondary metabolites
xhr01120
Microbial metabolism in diverse environments
xhr01200
Carbon metabolism
Module
xhr_M00009
Citrate cycle (TCA cycle, Krebs cycle)
xhr_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
xhr_M00149
Succinate dehydrogenase, prokaryotes
xhr_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
xhr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
XJ27_04730
00650 Butanoate metabolism
XJ27_04730
09102 Energy metabolism
00190 Oxidative phosphorylation
XJ27_04730
00720 Other carbon fixation pathways
XJ27_04730
Enzymes [BR:
xhr01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
XJ27_04730
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
Thi4
GIDA
Pyr_redox_2
FAD_binding_3
HI0933_like
Motif
Other DBs
NCBI-ProteinID:
ASW45359
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Position
complement(1105033..1106823)
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AA seq
596 aa
AA seq
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MSAYKITEHKYDMVVVGAGGAGLRATFGLAQKGLQTVCLTKVFPTRSHTVAAQGGISAAL
GNMGEDDWRYHFYDTIKGSDWLGDQDAIEYMCREAIPAIIELEHYGVPFSRTEEGKIYQR
PFGGMTTKYGEGPSAQRTCAAADRTGHAMLHTLYQQSLAHNARFMIEYFALDLIFDEEGV
CRGVLALDMADGTLHLFRAHGVVLATGGYGRAYFSATSAHTCTGDGGGLVMRAGLPVQDM
EFVQFHPTGIYGAGCLITEGVRGEGGILRNSNGERFMERYAPHYKDLASRDVVSRSMTVE
IREGRGVGEHKDHILLDLTHLGPEVINEKLPGIAESAHIFAGVDVTKQPIPVLPTVHYNM
GGIPTNFYGEVVRKQGDDPDAVVPGLYAIGEAACVSVHGANRLGSNSLLDLVVFGRAVAN
RCAETVKPNQPHKTLPSDACDKALGLLDKLRYANGSTPTSVIRDNMQRTMQSDAAVFRTS
KTLKEGVDKMAEIFATFEDVKVSDRSLVWNSDLIETYELNNLLLNAVATINSAEQRKESR
GAHSHEDFPDRDDVNWQKHTLVTVDDKGKCEFEYRPVHMYTLSQDVDVVPPKPRVY
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcttataagattacggaacacaagtacgacatggtcgtggtgggcgccggtggc
gccggactgcgcgccacgttcggcctggcccagaagggcctgcagacggtctgtctgacc
aaggtcttcccgacccgctcgcacaccgtggcagcgcagggcggtatttccgccgcgctc
ggcaacatgggcgaagacgattggcgctaccacttctacgacaccatcaaaggctccgat
tggctgggcgaccaggacgcgatcgagtacatgtgtcgcgaggcgatcccggccatcatc
gagcttgagcactacggcgtgccgttctcgcgcaccgaagagggcaagatctatcagcgc
ccgttcggtggcatgaccaccaagtacggcgaaggcccgtctgcacagcgcacctgcgcg
gcggccgatcgtaccggtcacgccatgttgcacacgctgtatcagcagtcgctggcgcat
aacgcgcgtttcatgatcgagtactttgcgctcgacctgatcttcgacgaagaaggcgtc
tgccgcggcgtgcttgcgctggacatggccgacggcaccttgcatctgttccgcgcccac
ggcgtggtgctggcgaccggcggttatggccgtgcctacttcagcgccacctccgcccac
acctgtaccggtgacggcggcggcttggtgatgcgtgccggcctgccggtgcaggacatg
gagttcgtgcagttccatcccaccggcatttacggtgcgggctgcctgatcaccgagggc
gtgcgcggcgaaggcggcattctgcgcaacagcaacggcgagcgcttcatggagcgctac
gcaccgcattacaaggatctggcatcgcgcgacgtggtatcgcgttcgatgacggtggag
atccgcgaaggccgtggcgtgggcgagcacaaggatcacatcctgctcgacctgacccat
ctcggcccggaagtcatcaacgaaaaactgcccggcatcgccgaaagcgcccacatcttt
gccggtgtggacgtgaccaagcagccgatcccggtgctgccgaccgtgcactacaacatg
ggcggcattccgaccaatttctacggcgaagtcgtgcgcaagcagggcgacgacccggat
gcggtggtgcctggcctgtacgcgatcggcgaagccgcctgcgtgtcggtgcacggtgcc
aaccggttgggctccaactcgttgctggatctggtggtgttcggccgtgcggtggcaaac
cgctgcgccgagacggtcaagcccaaccagccgcacaagacgttgccttcagatgcctgc
gacaaggcgctcggcctgctggacaagttgcgctacgccaacggctctacgccgacctcg
gtgatccgcgacaacatgcagcgcaccatgcagtccgatgctgcggtgttccgcaccagc
aagacgctgaaggaaggcgtggacaagatggcagagatcttcgccaccttcgaagacgtc
aaggtgtccgaccgctcgctggtctggaactcggatctgatcgagacctacgagttgaac
aacctgctgctcaatgcggtggcgacgatcaattcggccgagcagcgcaaggaaagccgt
ggcgcgcattcgcacgaagacttcccggaccgcgacgacgtcaactggcagaagcacacg
ctggtcaccgtcgacgacaagggcaagtgcgagttcgaatatcgcccggtgcacatgtac
acgctgagtcaggacgtggatgtcgtcccgccgaagccgcgcgtctactga
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