Xanthomonas hortorum: XJ27_05440
Help
Entry
XJ27_05440 CDS
T05082
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
xhr
Xanthomonas hortorum
Pathway
xhr00040
Pentose and glucuronate interconversions
xhr01100
Metabolic pathways
xhr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
xhr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
XJ27_05440
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
XJ27_05440
Enzymes [BR:
xhr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
XJ27_05440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
ASW45480
LinkDB
All DBs
Position
1257451..1258584
Genome browser
AA seq
377 aa
AA seq
DB search
MHFSIISLFLAFFIAQVGIAKAGTGGFSSASVSGETAITVTTLAELQAAFNAKNHHIIIR
GKIYGGPKLTTLNFSSTAWNNITIEGAAGGGAALQNIQLKFSGEKLPAGTNIQNVVIRNI
SFSGNVGDLQALPDQVEGTSNNIGINYVGVSLRRISNAWIDHCDFYDMSDDLLSVGRSSD
YITLSYNHFYFSNSWVNMNPDPVWNWVDKNYHDLANERLAILVGHNRNDSYVYGGNKLHV
TMHHNWFGPNLAGRPLLRGWVHAYNNYFDNSTLPNGMRTAADGRRYEKQQYNALQVGSGS
IVFSESNYFYKTNNSNQIRLESSGDMYNFYEKKNVYDAATGNSAIGSTFNNAPVKYSYKS
DDAARVPSIVLSTAGPH
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
ttgcatttctctattatctcgctgtttcttgctttttttatcgcacaggttggtatcgcc
aaggctggaaccggtggattttcttcagcgtctgtatctggcgagactgcgattacagtg
acaacgcttgcagagctgcaagcggcattcaatgccaaaaaccatcatatcatcatccgt
ggaaagatctacggcggcccaaaattgaccaccctgaatttctccagcacagcttggaac
aacataacaatcgagggtgctgcaggcggtggcgcggctttgcagaatatccaattgaaa
tttagcggcgagaagctgcccgccgggacaaacattcaaaacgtggttatcagaaacatc
tcattctctggcaatgtcggcgacttgcaagccttgcctgaccaagtcgaaggaacttcc
aacaacattggcatcaactacgtgggcgtatcattgcggcgtatatccaatgcttggatc
gaccactgcgatttctacgacatgagcgatgatcttttatcagtcggcaggtcatctgat
tacatcacgctgtcgtacaatcacttctacttcagcaacagctgggtcaacatgaatccg
gatccggtatggaactgggtcgataaaaattatcatgacctcgcaaatgagcgcttggca
atccttgttggtcacaacaggaatgactcatatgtatatggtggcaataagctgcacgtg
acgatgcaccacaactggtttggccccaatcttgccgggcgccccctactccgcggttgg
gtccatgcctacaataactactttgacaatagcaccttgcccaatggtatgcgcaccgct
gccgatggtcgccgctatgaaaagcagcagtacaacgctttgcaggtaggtagcggcagc
attgttttttccgaatcaaactatttttacaaaaccaataatagcaaccagattcgactg
gaatcaagcggggacatgtacaatttctacgagaaaaaaaacgtgtatgacgcagcaacc
ggcaattcggcgatcggctcaaccttcaataatgcgccggtgaaatacagctacaagtct
gatgatgcggcaagagtccccagcatcgttctatccaccgcggggccgcactaa
DBGET
integrated database retrieval system
