Xanthomonas hortorum: XJ27_05455
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Entry
XJ27_05455 CDS
T05082
Name
(GenBank) polygalacturonase
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
xhr
Xanthomonas hortorum
Pathway
xhr00040
Pentose and glucuronate interconversions
xhr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xhr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
XJ27_05455
Enzymes [BR:
xhr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
XJ27_05455
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Motif
Other DBs
NCBI-ProteinID:
ASW45482
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All DBs
Position
1260447..1262081
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AA seq
544 aa
AA seq
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MTLALLGLSTFQAGAARPHEQDLPDTAHSISTSWGVIQQPTLPTQVCATLKAALVPVAGS
LDTLDSDPAQSKRDTARLQAAIDDCPAGSAVRLVTGDAGESGVLSGPLTIKSGVTLWIDR
GVTLFGSRNPRDYDNGLGTCGTATSDKAKSCNPLIHVADTANSAIVGAGKIDGRGGSTLT
AGPNAGTASWWDLAYLNVTKGLSQHVPRLLQIDDSSDFTLYDITLENSPNFHVTTDNVVG
LTAWGIKILAPSLVYSRPGYRCPAGSTPDVNPHATCFTPETAKNTDGFDPGQSKKVLLAY
SYIGTGDDGVAIKAHASSKRSIASENMLFAYNQFYYTHGFSLGSETDSGMRHIAVRGLSI
DGFNSNDVNSDPYSANGLRIKSDGSRGGQVYDISFENVCMRGVARPLVFDANYANAAVRN
KLPNFSGIALTNVHSLGSKAFGGGELSFYGYRDATTTLPITLSLDNVVLEGGPISFAKPH
FGGPASNPGATHFTFKGGPVSFFDQLSESVPNDVQLQGKPGPGTPLQCNDAFIAYHSVLP
DSPI
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
ttgacgctcgccctgctcggcctatccaccttccaggccggtgcggcgcgtccgcatgaa
caggacctgcccgataccgcgcacagcatctccaccagttggggcgtgatccagcagccc
acgctaccgacgcaggtctgcgccacgctcaaggccgcgctggtgccggttgccggttcg
ctggatacgctcgacagtgatcctgcgcaatccaagcgcgataccgcgcgtctgcaggcg
gccatcgatgattgccccgccggcagcgccgtgcgtctggtcaccggcgatgccggcgaa
tctggcgtattgagcggcccgttgacgatcaagagcggagtcacgctatggatcgatcgc
ggcgtcaccttgttcggctcgcgcaatccgcgcgactacgacaatggcctgggcacctgt
ggcaccgcgaccagcgacaaggccaaatcctgcaacccgctgatccacgtcgccgacacc
gccaacagtgcgattgtgggtgccggcaagatcgatggccgcggcggcagcacgctcacc
gccggacccaatgccggcaccgccagctggtgggatctggcctatctcaacgtcaccaag
ggactgagccagcacgtgccgcgcctgctgcagatcgacgacagcagcgacttcaccctg
tacgacatcaccctggaaaactcgcccaacttccacgtcaccaccgataacgtggtcggc
ttgacggcatggggcatcaagattctcgcgcccagcctggtctactcacgtcctggctat
cgctgcccggccggcagcacgcctgatgtcaatccgcatgcgacctgcttcactccggaa
acggccaagaacaccgatggcttcgatcctggccagtccaagaaggtattgctggcctac
tcgtatatcggcaccggcgacgatggcgtggcaatcaaggcgcatgccagcagcaagcgc
agcatcgcctcggaaaacatgctgttcgcctacaaccagttctattacacgcacggtttt
tcgctgggcagcgaaaccgattcgggcatgcgccatatcgccgtgcgcggcctgagcatc
gatggcttcaacagcaacgacgtgaactccgatccgtattctgccaacggcttgcgtatc
aaatccgatggtagccgtggcggccaggtctacgacatcagtttcgaaaacgtctgcatg
cgcggcgttgccaggccgctggtattcgatgccaactacgccaatgcagcggtgcgtaac
aagctgcccaatttcagcggtattgcgttgaccaacgtgcactcgctcggttccaaggcg
tttggcggcggtgagctgagcttctacggctatcgcgatgcgaccaccaccttgccgatc
accctttcgctggacaacgtggtgctggaaggcggcccgatctcgttcgcaaagccgcat
ttcggcggaccggccagcaatccgggcgcgacgcacttcaccttcaagggcggcccggtg
agcttcttcgatcagctgtcggaatcggtgcccaacgatgtgcaactgcaaggcaagcct
gggccgggcacaccgctgcagtgcaatgacgccttcattgcttaccactcggtattgcct
gattcgccgatctga
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