Xanthomonas hortorum: XJ27_05820
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Entry
XJ27_05820 CDS
T05082
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
xhr
Xanthomonas hortorum
Brite
KEGG Orthology (KO) [BR:
xhr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xhr03009
]
XJ27_05820
Enzymes [BR:
xhr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
XJ27_05820
Ribosome biogenesis [BR:
xhr03009
]
Prokaryotic type
rRNA helicases
XJ27_05820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ASW45550
LinkDB
All DBs
Position
1338597..1339973
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AA seq
458 aa
AA seq
DB search
MNEFSALPLSPALAPGIDALGYTVLTPIQAQSLPPILQGLDVIAQAPTGSGKTAAFGLGL
LQKLDPALTRAQALVLCPTRELADQVGKQLRKLATGIPNMKLVVLTGGMPLGPQLASLEA
HDPQVVVGTPGRIQELARKRALHLGGVRTLVLDEADRMLDMGFEEPIREIASRCDKHRQS
LLFSATFPDIIRTLAREILKDPIEITVEGADNAPEIDQQFFEVDPTYRQKAVAGLLLRFN
PESSVVFCNTRKEVDEVAGSLQEFGFSALALHGDMEQRDRDEVLVRFVNRSCNVLVASDV
AARGLDVEDLAAVVNYELPTDTETYRHRIGRTARAGKRGLALSLVASRETGRAQALEAEQ
GQPLKWSRAPLATARPAQLPQAAMTTLRIDGGKTDKLRAGDILGALTGEAGLSGAAIGKI
AIYPTRSYVAIARAHVAKALAHLHAGKIKGRRFRVSKL
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaattctccgcgctgccgctgtcgccggccctggcccccggcatcgacgccctt
ggctacaccgtccttactcccatccaggcgcaaagcctgccgccgatcctgcaagggctc
gacgtcatcgcccaggcgcccaccggtagcggcaagaccgctgccttcgggctgggcctg
ctgcaaaagctagatcccgcgctgacccgcgcgcaggcgctggtgctatgccccacccgc
gagctggccgatcaggtcggcaaacagctgcgcaagctggccaccggcattccgaacatg
aaactggtggtactgaccggcggcatgccgctgggcccgcaactggcctcgctggaagcg
cacgatccgcaagtggtggtcggcacgcccgggcgtatccaggaacttgcgcgcaagcgc
gcgctgcatctgggcggcgtgcgcacgctggtgctggacgaggccgaccgcatgctcgac
atgggcttcgaagaacccatccgcgagatcgccagccgctgcgacaaacaccgtcagagc
ctgctgttttcggccaccttcccggacatcatccgtacgcttgcgcgcgagatcctgaag
gacccgatcgaaatcaccgtcgaaggcgccgacaacgcgccggaaatcgaccagcaattc
ttcgaggtcgacccgacctatcgacagaaagccgtcgccgggctgctgctgcgcttcaat
cccgagtccagcgtggtgttctgcaatacccgcaaggaagtggacgaagtggccggctcg
ctgcaggaattcggcttctctgcgctggccctgcatggcgacatggaacagcgcgaccgc
gatgaagtactggtgcgcttcgtcaatcgcagctgcaacgtgttggtggccagcgatgtg
gccgcgcgcggactggacgtggaagacctggcggcggtggtcaattacgagctgcccacc
gacaccgaaacctaccgccaccgcatcggccgcactgcgcgcgcgggcaagcgcgggctt
gcactcagcctggtggcctcacgcgaaacagggcgcgcccaggcattggaagccgaacaa
ggccagccgttgaagtggtcgcgtgcaccgttggccaccgcgcgcccggcacagctgccg
caggcggccatgaccaccttgcgcatcgacggcggcaagaccgacaaactccgcgcaggc
gacattctcggcgcgttgaccggcgaagccgggctctcgggcgcggcgatcggcaagatc
gcgatctaccccacccgctcctatgtcgccatcgcccgcgcgcacgtcgccaaggcactg
gcgcatctgcatgcgggcaagatcaaggggcgtcggttccgggtcagcaagctgtaa
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