Xanthomonas hortorum: XJ27_06500
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Entry
XJ27_06500 CDS
T05082
Name
(GenBank) type IV secretion protein Rhs
Organism
xhr
Xanthomonas hortorum
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
RHS
Motif
Other DBs
NCBI-ProteinID:
ASW48417
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All DBs
Position
1504142..1508194
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AA seq
1350 aa
AA seq
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MCGSSADFSFMSARAGQISSCSTANPCHPTTGDKTRSETDFMFAGRPFSRYYHSLAQFRD
RDNPFAVGWSHSYSDYLVLTDTYSPVLIDAEGNYENFVKVDGNIYRGANSNRIMIYLNTP
EAQYRLFEASGEIRDFNRDGALLSVRNPATPSNDVTLSYIEEQLTSATEASGRKIQFNYA
LDRLRSITLPDGSLISYDYDRDSNLTAADYGDGSVKRYHYHEQGLADPKLIHHLTGITSE
DGRRYGTFNYEPNGRVIGSALESGSEQVDAVSLSYDSSTTTSVTYALGEKKIFSAGSGLY
RSLENLASEAGNDKNTYLADGRLQSKTDRAGTVTKYEYQPTYLSAIVKAAGTAQQQREEF
VRDVAKNTLLEHRIYDPKGKLRQSTVLTYNGRGQQIARTQTDAVTGVVRTSRNEYCEQAA
LDAGSCPILGLITLSDGARMDVPDTTAYTYYGSDDSSCAGAPTTCPHRKGDLWKATNALG
QVTEYLAYDGAGRPLSIKDANGNITDYSYHRRGWLTATKVRGADPASDLDDRITRIDYWP
TGLIKQVTQPDGGFTTFTYDGAHRLTDVADNAGNTVHYTLDNAGNQIKEDTRDVAGTLKR
TLSRVYNQLGQLKTQATAASDPTDFAYDAKGNTVAVNDALGTATLSEYDPLNRLARSLQD
ASGIKAETKFTYDYQGNLAKVSDPKGLGTTYEYNGFGDLTKLASPDTGVTAYTYDSAGNR
ATQTDARGVITTYGYDALNRLTKLTYPKPTDGLDISYAYDVVPTVCAAGEAFVVGRLSRM
SDASGTTEYCYNAFGDVTRKVQTSNGKVLVLRYDYTVGGQLRRMTYPDGAVVDYLRNAQG
QTTEVGVTPAGGSRQVLLSNASYYPFGPAAGWTYGNGRTLARQYDLDYRPQAIRDTRPGG
LEVGFGFDPVGNLTALTPAGNPTPEIGLGYDTLGRLTALTDGTTGTVIDGYSYDATGNRL
SAKVGGVTQVYTYPATNHRLSAVASVARTYDKAGNTLTIGGKAREFSYDASGRMSMAKRA
GALVMNYRYNGRGEQVRRFLGTTNTYTLYDEAGHWLGDYDSNGAPKQQAIWLDDLPVGLL
ANANTLHYIEPDHLGSPRVVIDPTRDVAVWTWSLKGEAFGNTEPNQDPDGDGAALVLDMR
FPGQRYDAASGLSQNYFRDYEAATGRYGQSDPIGLEGGLSSYAYVSSRPLSSVDHNGLQA
IPLPMPLPIGPPGFGEGENGMDDFGGPRLPEPTAAGVLGGLYQISKTTPGFSLLDQSLTI
ANALCPENNDELCEKAKTDARNAYFKLITKRIPQFQTGGTRGRDPGHLQAITQLQARLRD
ALRRVRMYCKPLPAEYGEWERVANLNAPGF
NT seq
4053 nt
NT seq
+upstream
nt +downstream
nt
atgtgcggatcgagcgcggatttctcgttcatgtccgccagagcgggccagatatcgagt
tgctccaccgcaaacccgtgtcaccccaccactggtgacaagacgcggagcgaaaccgac
ttcatgttcgcggggagacccttttccaggtactaccactcactcgctcaattccgcgac
cgcgacaacccttttgcggttggctggtcgcatagctatagcgactatctggtcttaaca
gacacgtactcccccgtcttgatcgatgcggaggggaactacgaaaacttcgtcaaagta
gatggaaacatctatcgaggagcaaactcgaatcgcattatgatttatctgaatacgcca
gaggcgcagtatcgcctctttgaggcttctggtgagattcgggacttcaaccgcgacggt
gcgctgctatccgtacgaaatccggcaaccccctctaatgacgtcacactctcttacatc
gaagaacaattgacatcggcgaccgaggcgtccggcagaaagatccaattcaactacgca
cttgatcgcctacgatccatcacacttcccgatggaagcctgatcagttatgactatgat
cgcgactcaaatcttaccgcagcagattatggcgatggcagcgtaaagcgctatcactat
cacgagcaaggtcttgccgaccctaaattgatacatcacctcaccggcatcacatcggaa
gatgggcgtcgctacggcacgttcaattacgagcccaatggccgcgtcattggtagtgct
ttggagtccggaagcgaacaggtggacgccgtctcgcttagctacgatagctcaacgaca
acaagcgtgacctatgcacttggcgaaaagaagatattcagtgcaggatccggcctgtat
cgatcgctggagaacctcgccagtgaagctggaaacgacaaaaatacttacctagccgac
ggacgcttgcaatcgaaaaccgatcgcgcgggaaccgtcacgaagtacgagtaccagccg
acatatctatccgcaatcgtcaaggctgcgggtaccgcacagcaacaacgcgaggagttc
gttcgcgatgtcgccaaaaacacactgctcgaacacaggatttacgaccccaaaggcaag
ttacgccagtccaccgttcttacctacaatggacgtggccagcaaattgcccggacacaa
acagacgctgtcaccggtgtagtgagaacctcccgcaatgaatactgcgaacaagcagct
ctcgatgcgggtagctgccccatcctggggctaatcacactgtccgatggtgcgcgtatg
gatgtaccggatacgactgcctacacctactacggaagcgacgatagttcgtgcgctgga
gcgcccacaacctgcccgcaccgcaaaggcgatctttggaaagccaccaatgcacttgga
caggtgactgagtatctcgcctacgatggcgcaggtcgtccgctttccatcaaagatgca
aacggcaacatcaccgactacagctaccaccgtcgcggctggctgaccgcgaccaaagtg
cgcggagccgatccagcgagcgacctggacgaccgtatcacacgcatcgattactggccc
acgggcctgatcaagcaagtcacgcaacctgacggcggattcactaccttcacatatgac
ggtgcgcatcgcctgaccgatgtcgccgacaatgccggtaacacggtgcattacaccttg
gataacgccggcaaccagatcaaggaagacacccgagatgtcgccggaacgctgaagcgt
acgttatcacgcgtctacaaccagcttggacaactcaagacgcaggcaacggctgcaagt
gatccgaccgatttcgcttacgatgcaaaaggcaacaccgtcgcagtgaatgacgcgttg
ggtaccgccacgctgagcgagtatgacccgctgaacaggctcgcacgcagcttgcaggac
gccagcggcatcaaggccgaaaccaaatttacttacgactaccaaggcaacctggccaag
gtcagcgatccaaagggattgggcaccacgtacgagtacaacgggtttggcgacctgaca
aaactggccagtccagataccggcgtcaccgcttacacctacgacagcgccggcaaccgc
gccactcagaccgatgcgcgtggggttatcacgacttacggctatgacgcgctcaatcgc
ctcaccaagctgacctatccaaagccaaccgacggcctggatatcagttacgcctacgac
gttgtgccgacggtctgtgcggccggcgaagcgtttgttgtcggccgcctgtcgcgcatg
agcgatgccagtggcaccaccgaatattgctacaacgcgtttggcgatgttacccgcaag
gtgcagaccagcaacggcaaagtactagtgctgcgttacgactacacggtcggagggcag
ctgcggcgcatgacctatccggatggcgcggtggtcgattacctgcgcaacgcgcagggc
cagaccaccgaagttggcgttaccccggccggtggcagccgccaggtactgctgagcaac
gccagctactatccgttcggcccggccgccggctggacctacggcaatggccgcaccctc
gcccgccagtacgatctggactatcgcccacaggctatccgggacacccgcccgggcgga
ctggaagtgggcttcggcttcgatcctgtcggcaatctcaccgcgctcaccccagcaggc
aatcccacaccagagatcggcctgggctacgacacccttggccgcctcaccgccctcacg
gacggtaccactggaacagtcatcgacggctatagctatgacgccaccggcaatcgcctc
agcgccaaggtcggcggcgtgacacaggtctacacctatccggcgaccaatcatcgcctg
agtgcggtagcaagcgtggcgcgcacttacgacaaagcgggaaatacgctgacgatcggc
ggcaaagcgagggagttctcctacgatgcatccggccgcatgagcatggccaagcgtgca
ggcgcgctggtgatgaactaccgctacaacggccgtggcgagcaggtgcgccgcttcctc
ggcaccaccaatacctacacgctctatgacgaagccggccattggctaggcgactacgac
agcaacggcgcgcccaagcaacaggcgatctggctggacgatctaccggtcggcctgctg
gccaatgccaacacgctgcactacatcgaacccgaccacctgggcagcccacgcgtggtg
atcgacccaacccgcgatgtggccgtgtggacgtggagcttgaagggcgaagccttcggt
aacaccgaaccgaatcaggatcctgatggagatggtgcagcgctggtgttggatatgcgc
tttccggggcagcggtacgacgcagcgagtgggttgagtcagaactatttccgggactac
gaggcggctacggggcggtatgggcagagcgatccgattggactagaaggtggattgagt
tcctacgcctatgtcagctctagacctctaagcagcgtagatcataacgggctgcaagct
attcctcttcctatgccgcttcccatcggacctccaggattcggagaaggagaaaatggc
atggatgactttggcggcccccgtctaccggagccgaccgcagcaggagtgcttggcgga
ctttatcaaatctccaaaacaacacctggtttttccttgcttgatcagtcgctcacaata
gccaatgcgctatgccctgaaaacaatgacgagctctgcgaaaaagcaaagacagacgca
cgaaacgcctactttaaactgatcacaaaaagaatccctcaattccaaaccggtgggacc
agaggtcgcgaccctggccacttacaggcaatcactcaattgcaagcgcgcctacgcgac
gccctaagaagggtgcgaatgtactgcaagccattaccagccgagtatggcgaatgggaa
cgtgtcgccaacttaaacgcaccaggcttttaa
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