Xanthomonas hortorum: XJ27_07605
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Entry
XJ27_07605 CDS
T05082
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
xhr
Xanthomonas hortorum
Brite
KEGG Orthology (KO) [BR:
xhr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xhr03400
]
XJ27_07605
Enzymes [BR:
xhr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
XJ27_07605
DNA repair and recombination proteins [BR:
xhr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
XJ27_07605
Prokaryotic type
XJ27_07605
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ASW45843
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All DBs
Position
complement(1766949..1768367)
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AA seq
472 aa
AA seq
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MSYAIVWFRRDLRLQDNPALRAALDAGHAPIPLYIDAPHEEGEWTPGAASRSWRHRSLAA
LDAALRALGSGLVIRAGDSAQVLDEVIAQTGAVAVYWNRKYEPATQPRDAQIKRSLRERG
IEVQSCNAALLMEPWQLSTQQGGPYKVFTPYWRNALTQLQLPAAVAAPRSLPALPATLKG
AALETLGLVPKLDWDQGFWEHWQPGEAGAHEMLEIFIDGALSGYRENRDRPDRVGTSQLS
PHLHFGEIAPWRIASTLEANRNARNSAEIDGYIRQLGWRDFAYHLLHHFPDTTNQNLNPR
FEGFDWAKVDPVALQAWQRGRTGIPIVDAGMRQLWHTGWMHNRVRMIVASLLCKHLRIHW
IEGARWFWDTLVDADLANNTLGWQWVAGTGADAAPYFRVFNPVTQAEKFDPQAAYITRWV
PELGKLAVKERFAPWLSPLSLARFAPEYPRTPIIGLAEGRDAALAAYAKTRG
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgtcttacgccatcgtctggttccgtcgcgatctgcgccttcaggacaacccggccttg
cgcgctgcgctggatgccgggcatgccccgattccgctgtatatcgatgcgccgcacgaa
gaaggcgagtggacgcccggtgccgcgtcgcgcagttggcggcatcgctcgctggcggca
ctggatgcagcgctgcgcgcgctcggcagcggcctggtgattcgcgcgggcgacagcgcc
caggtgctggacgaggtgatcgcccagaccggtgcggtggcggtgtattggaaccgcaag
tacgaaccggccacccagccgcgcgatgcgcagatcaagcgcagcttgcgcgagcgcggc
atcgaggtgcagagctgcaatgccgcgctgttgatggagccgtggcagttgtcgacccag
cagggcggcccgtacaaggtcttcactccgtactggcgcaacgcactcacgcaactgcag
ttgcccgctgcagttgctgcgccacgcagcctgccagcgctgcctgcgacgttgaaaggc
gctgcgctggagacgctggggttagtgccgaaactggactgggatcaaggcttctgggag
cactggcaacctggtgaggctggtgcgcacgagatgctggaaattttcatcgacggcgcg
ctgtcgggctatcgcgaaaaccgcgatcggcccgatcgggtcggcacctcgcagctgtcg
ccgcatctgcatttcggcgagatcgcgccatggcggatcgccagtacgctggaagccaac
cgcaatgcgcgcaacagcgcagagatcgatggttacatccgccagttgggctggcgcgat
tttgcctatcacctgctgcatcactttcccgacaccaccaatcagaatctcaatccgcgc
ttcgaaggattcgattgggccaaggtcgacccggtcgcgttgcaggcctggcagcgcggc
cgcaccggtattccgatcgtcgatgccggcatgcgtcagctctggcacaccggctggatg
cacaaccgtgtgcgcatgatcgtggcgagtctattgtgcaagcatttgcgtatccactgg
atcgaaggggcgcgctggttctgggacacgctggtggatgcggacctggccaacaacacc
ttgggctggcaatgggtggccggtaccggcgcggatgcggcgccgtattttcgcgtgttc
aatccggtgacgcaggcggagaaattcgatccgcaggcggcttacatcacacgctgggta
ccggagctgggcaagcttgcggtgaaggagcgtttcgcaccgtggttgtctccgttgtcg
ttggcgcgattcgcgccggagtacccgcgcacgccaattatcggattagccgaaggtcgc
gatgcggcgttggcggcgtatgcgaagacgcggggataa
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