Xanthomonas hortorum: XJ27_08195
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Entry
XJ27_08195 CDS
T05082
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
xhr
Xanthomonas hortorum
Brite
KEGG Orthology (KO) [BR:
xhr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xhr03016
]
XJ27_08195
Enzymes [BR:
xhr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
XJ27_08195
Transfer RNA biogenesis [BR:
xhr03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
XJ27_08195
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
ASW45942
LinkDB
All DBs
Position
complement(1904918..1905520)
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AA seq
200 aa
AA seq
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MKQQFLYLSSAEAQLSLGLGEEKTTERLFFAVMADARTAEHAAIIAEGLLGSGHVDGKPL
ARERLHVTLHHLGDYAGGLPPSLVSRASQAAERVVLDAFDVAFDRVGTFGGRRSQLPCVL
RGEEQVRGLYELQGALGRQLAHVGIAGDAQYTPHMTLLYCNQALPQRRCDTLAWTVREFA
LVRSFLGQSRYQIEGRWSLR
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagcagttcctgtacctgtcgtcggccgaggcgcagttgtcgctgggcctgggg
gaagagaagaccaccgagcgtctgttttttgcggtgatggccgatgcgcgcactgccgag
catgcggccatcatcgccgaagggttgcttggtagcggtcatgtcgatggcaagccgctt
gcgcgcgagcggctgcatgtgaccttgcatcatctgggcgattacgcaggcggtttgccg
ccgtcgttggtgagccgcgccagtcaggcggccgagcgcgtggtgctggatgcattcgac
gtggcgttcgatcgggttggcaccttcggtggacgacgttcgcagttgccgtgcgtgttg
cgcggcgaagaacaggtgcgcggcttgtatgaattgcaaggtgcactgggtcggcaactg
gcgcacgtgggcattgccggcgatgcgcagtacacgccgcatatgacgctgctgtattgc
aatcaggcgttgccgcagcggcgctgcgatacgctcgcctggacggtgcgcgagttcgcg
ctggtgcgcagctttctcggccaatcgcgttaccagatcgaaggccgctggtcgctgcgc
tga
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