Xanthomonas hortorum: XJ27_08445
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Entry
XJ27_08445 CDS
T05082
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
xhr
Xanthomonas hortorum
Pathway
xhr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
xhr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
XJ27_08445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xhr03019
]
XJ27_08445
03009 Ribosome biogenesis [BR:
xhr03009
]
XJ27_08445
03036 Chromosome and associated proteins [BR:
xhr03036
]
XJ27_08445
Enzymes [BR:
xhr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
XJ27_08445
Messenger RNA biogenesis [BR:
xhr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
XJ27_08445
Ribosome biogenesis [BR:
xhr03009
]
Eukaryotic type
90S particles
RNase
XJ27_08445
Prokaryotic type
rRNA processing factors
XJ27_08445
Chromosome and associated proteins [BR:
xhr03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
XJ27_08445
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
ASW48459
UniProt:
A0AA47I8X0
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All DBs
Position
complement(1951469..1952149)
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AA seq
226 aa
AA seq
DB search
MGNRTFQRGDPIGHAFADPGLLAQALRHRSAGTPHNERLEFLGDGIVNLLIAEALYQRWP
KADEGALTRARAELVREGALAVIGRTLNLGERLTLGPGELKSGGHRRDSILADAVEAIVA
AIYLDCGFERCREVVLPWFEPSLAALPVGKAEKDPKTRLQEWLQARQLPLPNYALISESG
DEHAKQFHVACILEQPVARAEGQGTSRRLAEQQAATLVIAQLDSNT
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
gtgggcaatagaactttccagcgtggcgatccgatcgggcacgcgtttgccgatccgggt
ctgctcgcccaggcgctgcggcatcgcagcgccgggaccccgcataacgaacggctggaa
ttcctcggcgacggcatcgtcaatctgctgatcgccgaggcgctgtatcagcgctggccc
aaggccgacgaaggcgcattgacccgtgcgcgcgccgaactcgttcgcgaaggggcgctg
gccgtcatcggccgcacgctgaatctgggcgagcgtttgacgctcggtccgggcgagctg
aaatccggtggccaccggcgcgattcgatcctggccgatgcggtcgaagcgatcgtggcg
gcgatctatctggactgcggcttcgagcgttgccgtgaggtggtgctgccctggttcgag
ccttcattggctgcgctgccggtgggcaaggctgaaaaagatcccaagacccggctgcag
gaatggctgcaggcgcggcaactcccgctgcccaattacgcgctgatcagtgaaagcggc
gacgaacatgccaagcagttccatgtcgcctgcattctggaacagcccgtcgcccgcgcc
gaaggccagggcacctcgcgtcgcctcgccgagcaacaggcggccacccttgtcatcgca
caactggattcaaacacgtga
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