Xanthomonas hortorum: XJ27_08625
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Entry
XJ27_08625 CDS
T05082
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
xhr
Xanthomonas hortorum
Pathway
xhr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
xhr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
XJ27_08625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xhr03400
]
XJ27_08625
DNA repair and recombination proteins [BR:
xhr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
XJ27_08625
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
MutS_C
AAA_27
Motif
Other DBs
NCBI-ProteinID:
ASW46015
LinkDB
All DBs
Position
1999567..2002188
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AA seq
873 aa
AA seq
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MQNTDSKDKSKATSGAVEHTPLMKQFFAAKSDYPDLLLFFRMGDFYELFYDDARKAARLL
DITLTQRGSSGGAPIPMAGVPVHAYEGYLARLVALGESVAICEQIGDPALAKGLVERKVV
RIVTPGTVTDEALLDERRDTLLMAISRSKQGYGLAWADLAGGRFLVNEVDSVDALEAEIA
RLEPAELLVPDEDNWPEFLRGRVGVRRRPPWLFDADSGRRQLLAFFKLHDLSGFGIDDKP
CATAAAGALLGYVEETQKQRLPHLTSIAMEVASEAISMNAATRRHLELDTRVDGDTRNTL
LGVLDSTITPMGGRLLRRWLHRPLRLREVLVQRHHAVGSLIDTGADADVREAFRALGDLE
RILTRVALRSARPRDFSTLRDGLALLPKVRTILAPLDSPRLQTLYAELGEHDATAHLLIS
AVAEQPPLKLSDGGVIASGYDADLDELRRLSTNADQFLIDLEQRERASSGIATLKVGYNR
VHGYYIEISKGQAEKAPLHYSRRQTLTNAERYITEELKSFEDKVLSARERSLSREKLLYE
GLLDALGGELEGLKRCASALSELDVLAGFAERAQALDWSQPELDSAPCLRIERGRHPVVE
AVRDQPFEPNDLDLHTDRRMLVITGPNMGGKSTYMRQNALIVLLAHIGSYVPASRAVIGP
IDRILTRIGAGDDLARGQSTFMVEMAETSYILHHATPQSLVLMDEIGRGTSTYDGLALAD
AVARHLAHTNRCYTLFATHYFELTALADESHAGGASGIANVHLDAVEHGERLVFMHAVKD
GPANRSFGLQVAALAGLPKAAVTQARHRLAELEQRGGESHVAQMAPAALDAPQQFGLFTA
PSSAAQEALQALDPDELTPKQALEALYRLKALL
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
ttgcaaaacactgattcaaaagacaaatccaaggccaccagcggagcagtcgagcacacc
ccgctgatgaagcaattcttcgccgccaagtcggactaccccgacctgctgctgttcttt
cgtatgggcgatttctacgagctgttctacgacgatgcgcgcaaggccgcgcggctgctc
gatatcacgctgacccagcgcggcagttccggtggtgcgccgattccgatggccggcgtg
ccggtgcatgcctacgaaggctatctggcgcggctggtggcgttgggcgagtcggtggcg
atctgcgagcagatcggcgacccggcgctggccaagggcctggtcgaacgcaaggtggtg
cgcatcgtcacgcccggcacggtcaccgacgaggcgctgctggacgagcgccgcgacacg
ctgttgatggcgatctcgcgcagcaagcaaggctacggtctggcctgggccgatctggcc
ggcgggcgttttctggtcaatgaagtggacagcgtggatgcgctggaagcggaaatcgcg
cgcctggaaccggccgagctgctggtgcccgacgaagacaactggccggaattcctgcgc
ggccgcgtcggcgtgcggcgtcggccaccgtggttgttcgacgccgatagcggccgtcgt
cagctgctggcgttcttcaagttgcacgacctgtccggcttcggcatcgacgacaaaccg
tgtgccactgcggcggccggcgcgctgctcggctatgtcgaagaaacccagaagcagcgc
ctgccgcatctgacctccatcgcgatggaagtggccagcgaagcgatctcgatgaacgcg
gccacgcgccggcatctggaactggacacgcgcgtcgatggcgacacccgcaacaccttg
ctcggtgtgctggacagcacgatcacgccgatgggcgggcgcctgctgcggcgttggctg
caccgtccgctgcggctgcgcgaggtgttggtgcagcgccaccacgcggtcggcagcctg
atcgacaccggcgccgatgccgacgtgcgcgaggccttccgcgcgcttggcgatctggaa
cgcatcctcacccgcgtggcactgcgctcggcgcgcccgcgcgatttttccaccttgcgc
gatggcctggcgctactgccgaaggtccgcaccatcctcgcgccactggattcgccgcgc
ctgcagacgctgtacgcagaactcggcgaacacgatgccaccgcgcatctgctgatcagc
gcagtggccgaacaaccgccgctcaagctcagcgacggcggcgtcatcgccagcggttac
gacgccgatctggacgagttgcgccgcctgtccaccaacgccgaccaattcctgatcgac
ctggaacaacgcgaacgcgccagcagcggcatcgccacgctcaaggtcggctacaaccgc
gtgcacggctactacatcgaaatcagcaagggccaggccgaaaaagccccgctgcactac
agccgccggcagacgctgaccaatgctgagcgctacatcaccgaggaactcaagagcttc
gaggacaaggtgctgtcggcgcgcgagcgctcgttgtcgcgcgaaaaactgctgtacgaa
ggtctgctggacgcgctcggtggcgagcttgaaggcctcaagcgctgcgccagcgcattg
agcgaactggatgtgctggccgggttcgcggaacgcgcgcaagcgctggattggtcgcaa
ccggaactggacagcgcaccgtgcctgcgcatcgaacgcggccgccacccagtggtggaa
gcggtgcgcgaccaaccgttcgaacccaacgatctggacctgcacaccgaccgccgcatg
ctggtcatcaccggcccgaacatgggcggtaaatcgacctacatgcgccagaacgcgttg
atcgtgttgctggcgcatatcggcagctatgtaccggccagccgtgcagtgatcgggccg
atcgaccgcatcctcacccgcatcggtgccggcgacgatctggcccgcgggcaatccact
ttcatggtggaaatggccgaaaccagctacatcctgcatcacgccacgccgcaatcgctg
gtgctgatggacgagatcggccgcggcacttccacctacgacggcctggcgctggccgac
gcggttgcgcgccacctggcgcataccaatcgctgctacacgctgtttgccacgcattac
ttcgagctcaccgcactggccgacgaatcgcatgccggcggcgccagcggcattgcgaac
gtgcatctggatgcggtcgaacacggcgaacgcctggtgttcatgcatgcggtcaaggac
ggcccggccaatcgcagcttcggcctgcaggtcgctgcgctggccggcttgcccaaggct
gcggtcacccaggcgcgtcatcgtctggccgaactggaacaacgcggcggcgaaagccat
gtcgcgcagatggccccggccgcattggatgcgccgcagcagttcggcctgttcaccgcg
ccctcctctgctgcgcaagaagcactgcaggcgctggacccggacgaactcacgcccaag
caggcgctggaggcgctgtatcggctgaaggcgttgctgtga
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