Xanthomonas hortorum: XJ27_13095
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Entry
XJ27_13095 CDS
T05082
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
xhr
Xanthomonas hortorum
Brite
KEGG Orthology (KO) [BR:
xhr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xhr03032
]
XJ27_13095
03400 DNA repair and recombination proteins [BR:
xhr03400
]
XJ27_13095
Enzymes [BR:
xhr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
XJ27_13095
DNA replication proteins [BR:
xhr03032
]
Prokaryotic type
DNA Topoisomerases
XJ27_13095
DNA repair and recombination proteins [BR:
xhr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
XJ27_13095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
HC2
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
ASW46801
LinkDB
All DBs
Position
2966022..2968514
Genome browser
AA seq
830 aa
AA seq
DB search
MPKHLLIVESPAKAKTINKYLGKDFTVLASYGHVRDLVPKEGAVDPDNGFAMRYDLIEKN
EKHVEAIARAAKTADDIFLATDPDREGEAISWHIAEILKERGLLKDKPMQRVVFTEITPR
AIKEAMLKPRAIAADLVDAQQARRALDYLVGFNLSPVLWRKVQRGLSAGRVQSPALRMIV
EREEEIEAFIAREYWSIDAQCRHPSQPFNARLIKLDGQKFEQFTVTDGDTAEAARLRIQK
AAQGVLHVTDVASKERKRRPAPPFTTSTLQQEASRKLGFTTRKTMQVAQKLYEGVALGDE
GSVGLISYMRTDSVNLSQDALAEIRDVIARDFGTASLPDQPNTYTTKSKNAQEAHEAIRP
TSALHTPAQVARFLSDDERRLYELIWKRAVACQMIPATLNTVSVDLSAGSEHVFRASGTT
VVVAGFLAVYEEGKDTKSSEDEDEGRKLPPMKAGDNIPLDRIVTDQHFTQPPPRFTEAAL
VKTLEEYGIGRPSTYASIIQTLQFRKYVEMEGRSFRPTDVGRAVSKFLSGHFTRYVDYDF
TAKLEDDLDAVSRGEAEWIPLMEKFWGPFKELVEDKKDSLDKTDAGSVRVLGADPVSGKE
VSARIGRFGPMVQIGTVEDEEKPTFASLRPGQSIFSISIEDALELFKMPRALGQDKDQDV
SVGIGRFGPFARRGSVYASLKKEDDPYTIDLERAVFLIEEKEEIARNRVIKEFDGSDIQV
LNGRFGPYISDGKLNGKIPKDREPASLSFEEVQQLLTDTGKPVRKGFGAKKATLKKNTVK
DSSPKKTAVKKTATKTATTKTAAKKAPAKKTAAKKAAKRVVKKVASKTAG
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagcacctgctcatcgtcgaatcgcccgccaaggccaagacgatcaataaatac
ctcggcaaggacttcaccgtcctggcctcgtatgggcacgtgcgcgacctggtccccaag
gaaggcgcggtcgatccggacaacgggttcgcgatgcgttacgacctgatcgaaaagaac
gaaaagcatgtcgaagccattgcgcgtgcggccaagaccgccgacgacatctttctggcg
accgacccggaccgcgagggcgaggcgatcagctggcacatcgccgagatcctgaaagag
cgcggtctgctcaaggacaagccgatgcagcgggtggtgttcaccgagatcaccccgcgc
gcgatcaaggaagcgatgctcaagccgcgtgcgatcgccgccgacctggtcgatgcgcag
caggcacgtcgcgcgctcgactatctggtcggcttcaacctgtcgccggtgctgtggcgc
aaggtgcagcgcggcctgtcggccggccgcgtgcagtcgccggcgctgcgcatgatcgtc
gagcgcgaagaagagatcgaagccttcatcgcgcgcgaatactggtccatcgatgcgcaa
tgccggcatccgtcgcagccgttcaacgcgcgcctgatcaagctggacgggcagaaattc
gagcagttcaccgtcaccgacggcgataccgctgaagccgcgcgtctgcgcatccagaag
gccgcgcaaggcgtgctgcatgtcaccgacgtggccagcaaggagcgcaagcgccgcccc
gccccgccgttcaccacttccacgctgcagcaggaagcctcgcgcaagctcggtttcacc
acccgcaagaccatgcaggtggcgcagaagttgtacgaaggtgtggcgctcggcgacgag
ggctcggtcggtctgatcagctatatgcgtaccgactcggtgaatctgtcgcaggacgcg
ttggcggaaatccgcgacgtgatcgcgcgcgatttcggcaccgcgtcgttgccggatcag
cccaatacctacaccaccaaatccaagaatgcgcaggaagcgcatgaggcgatccgtccg
acctcggcattgcacacaccggcgcaggtcgcgcgctttctgtccgacgacgagcgccgt
ctgtacgaattgatctggaagcgcgcagtcgcctgccagatgattccggccacgctcaat
accgtcagcgtcgacctgtcggccggcagcgagcatgtgttccgcgccagcggcactacc
gtggtggttgcgggctttttggccgtgtacgaagaaggcaaggacaccaagagcagcgaa
gacgaggacgagggccgcaagctgccgccgatgaaggctggcgacaacattccgctggac
cgcatcgtcaccgatcagcatttcacccagccgccgccgcgcttcaccgaagcggcgctg
gtcaagacgctggaggaatacggcatcggccgtccgtccacctacgcctcgatcatccag
accctgcagttccgcaagtatgtggagatggaaggccgcagcttccgccctaccgacgtg
ggccgtgcggtgtccaagttcctgtccgggcatttcacccgctacgtggattacgacttc
accgccaagctcgaagacgatctggatgcggtctcgcgtggcgaagcggaatggattccg
ttgatggagaagttctggggcccgttcaaggaactggtcgaagacaaaaaggattcgctg
gacaagaccgacgccggcagcgtgcgcgtgcttggcgccgacccggtcagcggcaaggaa
gtcagcgcgcgcatcggccgcttcggcccgatggtgcagatcggcacggtcgaagacgaa
gaaaagcccacattcgcctcgttgcgcccgggccagagcatcttttcgatctccatcgaa
gacgcgctggaactgttcaagatgccgcgcgcgctgggccaggacaaggaccaggacgtc
agcgtcggcatcggccggttcgggccgtttgcgcgccgtggcagcgtgtatgcctcgctg
aagaaggaagacgacccgtacaccatcgatctggaacgcgcggtgttcctgatcgaagag
aaggaagagatcgcgcgcaatcgggtgatcaaggaattcgacggcagcgacatccaggtg
ctcaacggccgcttcggcccgtacatcagcgacggcaagctcaacggcaagatccccaag
gatcgcgaaccggcgtcgctgagcttcgaagaagtgcagcagttactgaccgacaccggc
aagccggtgcgcaagggcttcggtgcgaagaaggccacgctgaagaagaatacggtcaag
gattcgtcgccgaagaagaccgcagtcaagaagaccgccaccaagactgctacgaccaag
accgctgccaaaaaggctccggccaagaaaaccgccgccaagaaggccgccaagcgtgtg
gtcaagaaagtggcgagcaagacggcaggctga
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