Xanthomonas hortorum: XJ27_14385
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Entry
XJ27_14385 CDS
T05082
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
xhr
Xanthomonas hortorum
Pathway
xhr03030
DNA replication
xhr03410
Base excision repair
xhr03420
Nucleotide excision repair
xhr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xhr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
XJ27_14385
03410 Base excision repair
XJ27_14385
03420 Nucleotide excision repair
XJ27_14385
03440 Homologous recombination
XJ27_14385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xhr03032
]
XJ27_14385
03400 DNA repair and recombination proteins [BR:
xhr03400
]
XJ27_14385
Enzymes [BR:
xhr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
XJ27_14385
DNA replication proteins [BR:
xhr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
XJ27_14385
DNA repair and recombination proteins [BR:
xhr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
XJ27_14385
NER (nucleotide excision repair)
GGR (global genome repair) factors
XJ27_14385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
ASW47031
LinkDB
All DBs
Position
complement(3260293..3263094)
Genome browser
AA seq
933 aa
AA seq
DB search
MSKLVLIDGSSYLYRAFHALPPLTNAQGEPTGALFGVVNMLRATLKERPAYVAFVVDAPG
KTFRDDLYADYKANRPSMPDDLRAQVQPMCDIVHALGIDILRIDGVEADDVIGTLALQAA
ADGLSVTISTGDKDFAQLVRPGIELVNTMSGSRMDSDEAVIAKFGVRPDQIVDLLALMGD
TVDNVPGVDKCGPKTAAKWLAEYDSLDGVIANADKIKGKIGENLRAALPRLPLNRELVTI
KTDVTLASGPRVLDLREPNAETLAVLYARYGFTQALRELGGAAAQAGLLTEPMPLGAAAA
SARTEPGRARGTGFVSGPVSAPVEVDPALSAPGQYDTILTQEQLDNWITRLRAAGQFAFD
TETDSLDPLQADLIGLSVAAEPGQAAYLPFGHNFPGAPAQLERRQALAQLAPLLTDPAVR
KLGQHGKYDLHVMRRHGIALAGYSDDTLLQSFVLNSGSARHDMDSLAKRYLGYDTVKYED
VCGKGAKQIPFAQISLDDATRYAAEDADITLRLHHVLGPKLAAEPGLERVYREIEMPLVE
VLARIEANGVCVDAAELRRQSADLSKRMLAAQQKATELAGRTFNLDSPKQLQALLFDELK
LPAVVKTPKGQPSTNEEALEAIADQHELPRVILEYRGLTKLRSTYTDKLPEMIHPQSGRV
HTSYHQAGAATGRLSSSDPNLQNIPIRTEDGRRIRRAFVAPAGRKLIACDYSQIELRIMA
HLSGDPGLVGAFESGADVHRATAAEVFGRTIDTVSNDERRAAKAINFGLMYGMSAFGLAR
QLGIGRGEAQDYIALYFSRYPGVRDFMETTRQQARDKGYVETVFGRRLYLDFINAGSQGQ
RAGAERAAINAPMQGTAADIIKRAMVSVDAWIADHAEHALMILQVHDELVFEADADFVDT
LLGEVTARMSAAAELRVPLVVDSGVGDNWDEAH
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaattagtcctgatcgacgggtccagttacctgtatcgcgcgttccacgcgctt
ccgccgctgaccaatgcccagggcgagcccaccggtgccttgttcggtgtggtcaacatg
ctgcgcgccaccttgaaggaacgcccggcctatgtcgcgttcgtggtggatgcgcccggc
aagacctttcgcgatgacttgtatgccgactacaaggccaatcgcccgtcgatgcccgac
gacctgcgcgcgcaggtgcagccgatgtgcgacatcgtgcatgcgctgggcatcgacatc
ctgcgcatcgacggcgtggaagccgacgatgtgatcggcacgctggccctgcaggccgcc
gccgatggcctgagcgtcaccatctccaccggcgacaaggacttcgcccagctggtgcgc
ccgggcatcgaactggtcaacaccatgagcggcagccgcatggattcggacgaggcggtg
atcgccaagttcggcgtgcgccccgaccagatcgtcgacctgctcgcgctgatgggcgac
accgtcgacaacgtgcccggcgtggacaagtgcggccccaagaccgccgccaaatggctg
gccgaatacgactcgctcgatggcgtgatcgccaacgccgacaagatcaagggcaagatc
ggcgagaacctgcgcgccgcattgccgcggctgccgctcaaccgcgaactggtcaccatc
aagaccgacgtaaccctggccagcggcccgcgcgtgctggacctgcgcgagcccaacgcc
gaaacgctggcggtgctgtacgcacgttacggcttcacccaggcgctgcgcgaactcggc
ggcgccgctgcccaggccggcctgctgaccgagccgatgccgcttggcgccgccgcagcc
agcgcccgcaccgaacccggccgcgcgcgcggcaccggcttcgtgtccggcccggtcagc
gccccggtggaagtggacccggcgctgtcggcacccggccagtacgacaccatcctgacc
caggaacagctcgacaactggatcacccgcctgcgcgccgccggccagttcgccttcgat
accgaaaccgacagcctggatccgctgcaggccgacctgatcggcctcagcgtggccgcc
gagcctggccaggcggcgtatctgccgttcggccacaactttcccggcgctccggcccag
ctcgagcgccgccaggcgctggcccagctggcaccgttgctcaccgaccccgccgtgcgc
aagctcggccagcacggcaagtacgacctgcacgtgatgcgccgccacggcatcgccctg
gccggctacagcgacgacaccttgctgcagagcttcgtgctcaattccggcagcgcccgt
cacgacatggacagcctggccaagcgctacctgggctacgacacggtcaagtacgaagac
gtctgcggcaagggcgccaagcagatcccgttcgcgcagatcagcctggacgacgccacc
cgctacgccgccgaagatgccgacatcaccttgcgcctgcaccacgtgcttggccccaag
ctggccgcagaaccgggcctggagcgcgtctaccgcgagatcgagatgccgctggtggag
gtattggcgcgcatcgaagccaacggcgtatgcgtggacgcggccgaactgcgccgccag
agcgcggacctgtccaagcgcatgctcgccgcccagcaaaaagccaccgagctggccggg
cgcaccttcaacctggattcgcccaagcagctgcaggcgctgctgttcgacgagctcaag
cttcccgccgtggtcaagacgcccaagggccagccctccaccaacgaagaggcgctggaa
gccatcgccgaccagcacgagctgccacgggtgatcctggagtaccgcggcctgaccaag
ctgcgcagcacctacaccgacaagctgccggagatgatccacccgcagtccgggcgcgtg
cacaccagttaccaccaggccggcgcggccaccgggcggctgtcttcgtccgatcccaac
ctgcagaacatcccgatccgcaccgaagacggccgccgcatccgccgcgccttcgtcgcc
ccggccgggcgcaagctgatcgcctgcgactactcgcagatcgagctgcgcatcatggcc
cacctatccggcgaccccggcctggtgggcgcgttcgagtccggcgccgacgtgcaccgc
gccaccgccgccgaagtgttcggccgcaccatcgacaccgtcagcaatgacgagcgccgc
gccgccaaggcgatcaacttcggcctgatgtacggcatgagcgccttcggcctggcccgc
cagctcggcatcggccgtggcgaggcgcaggactacatcgcgctgtacttcagccgctac
cccggcgtgcgcgacttcatggaaaccacccgccagcaggcgcgcgacaagggctacgtg
gaaacggtgttcggccgccggctatacctggacttcatcaacgccggcagccagggccag
cgtgccggcgcagagcgcgccgcgatcaacgcgccgatgcagggcaccgccgccgacatc
atcaagcgcgccatggtcagcgtggacgcctggatcgccgaccacgccgaacacgcgctg
atgatcctgcaggtgcacgacgaactggtgttcgaagccgatgccgacttcgtcgacacc
ttgctgggcgaggtcaccgcgcgcatgtcggccgcagctgaattgcgcgtgccgctcgtg
gtcgactccggcgtcggcgataactgggatgaggcgcactga
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