Xanthomonas hortorum: XJ27_16250
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Entry
XJ27_16250 CDS
T05082
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
xhr
Xanthomonas hortorum
Pathway
xhr03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
xhr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
XJ27_16250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xhr03400
]
XJ27_16250
DNA repair and recombination proteins [BR:
xhr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
XJ27_16250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
QueG_DUF1730
Motif
Other DBs
NCBI-ProteinID:
ASW47340
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All DBs
Position
3734727..3735674
Genome browser
AA seq
315 aa
AA seq
DB search
MARPIWTGTLSFGLLNVPVSLMSGERKVDLHFRMLDSRDKKPIRFERVNADTGDEVPWKE
IVKAFEYDKGSYVIVEEQDIRSASPESHETVEVETFVDAADIDPRYFEKPYILVPGKKAE
KGYVLLRETLRDTGKVGIAKVVIRTREYLAAVMPQGDALILLLLRYQQEVVDPQDFKLPA
GAVGEYRITPKEQEMARQLIESMSGTWQPEDYHDEFRGKLEQLLRKRIQEKGGTTKVDIE
PPQHEDATTNVVDFMSLLQKSLQANTRTPAKKSSAPAAPAKKTATKKAAKKATKKTASKP
TKTAAAKAPPRRKAG
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggcacgaccgatctggaccggaaccctctcgttcggcttgctcaatgtgccggtgtcg
ctgatgtcgggcgagcgcaaggtggacctgcatttccgcatgctcgactcgcgcgacaag
aagccgatccgcttcgagcgcgtcaatgccgacaccggcgacgaggtgccgtggaaggag
atcgtcaaggcattcgagtacgacaagggcagctatgtgattgtggaggagcaggatatc
cgatcggcctcgccggaaagccatgaaacggtagaggtggagacctttgtcgacgccgcc
gacatcgacccgcgctatttcgaaaagccctacatcctggtgcccggcaagaaagccgaa
aaaggctatgtgttgctgcgcgaaacgctacgcgacaccggcaaggtgggcatcgcaaaa
gtggtcatccgtacccgcgagtacctggcggcggtgatgccgcagggcgatgcgttgatc
ctgctgctgctgcgctaccagcaggaagtggtggacccgcaggacttcaagctgccggcc
ggcgcggtgggcgaataccgcatcacgcccaaggaacaggagatggccaggcagttgatc
gagtcgatgtccggcacctggcagccggaggattaccacgacgaattccgcggcaagctg
gagcagctgctgcgcaagcgcatccaggaaaagggcggcaccaccaaggtggacatcgag
ccgccgcagcacgaagacgccaccaccaacgtggtcgatttcatgtcgctgctgcagaag
agcctgcaagccaatacacgcacgccggccaagaaaagcagtgcgccggcagcgcctgcc
aagaaaaccgcaaccaagaaggcggccaagaaggccaccaaaaagaccgcgagcaagccg
accaaaacagcggctgcgaaagcaccgccgcgccgcaaggccggatag
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