Xanthomonas hortorum: XJ27_16815
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Entry
XJ27_16815 CDS
T05082
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K02481
two-component system, NtrC family, response regulator
Organism
xhr
Xanthomonas hortorum
Brite
KEGG Orthology (KO) [BR:
xhr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
xhr02022
]
XJ27_16815
Two-component system [BR:
xhr02022
]
NtrC family
Unclassified
XJ27_16815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
HTH_50
AAA_16
HTH_30
Mg_chelatase
HTH_28
AAA_2
AAA
AAA_22
Phage_NinH
HTH_23
AAA_7
AAA_3
Motif
Other DBs
NCBI-ProteinID:
ASW47436
LinkDB
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Position
3878895..3880235
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AA seq
446 aa
AA seq
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MARVLIIDDDAAFLATLQATLRSLGHTVIAVDNGAEGLARLSEGGLDLAFVDFRMPGMTG
IEVLRARLDDAPSRQVPLVMLTAYASSGNTIEAMTLGAFDHLVKPVGRADIVDVVERALA
SRADIPVDTIGAEQPEDDDALVGHSPAMRTVHKRIGLAAASDLQVLITGETGTGKELAAR
ALHRASARASAAFVAVNCAAIPLELMESELFGHRKGAFSGATGDRIGLIREADGGTLFLD
EIGDMPLPMQAKLLRFLQEGEVTPLGGRGAQKVDVRVLAATHRDLAAWVAAGQFRSDLRY
RLNVVPIELPPLRERGQDIVLLAQYFLRNGEGAARALSPDAQARLLVYPWPGNVRELRNV
MQRSQLLVRGHSITAEDLDEALGHSAEQPMTTAPLEGTLPEAVARLEKQMIHDALAHSGG
NRAEAARRLGIHRQLLYRKLDEYGLQ
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgtgtcctgatcatcgatgacgatgccgcctttcttgcgacattgcaggcaacg
ctgcgctcgctcgggcatacggtgatcgcagtggacaacggggcggagggactggcgcgc
ctgagcgaaggtggtctggatctggccttcgtggactttcgcatgccgggcatgaccggc
atcgaggtgctgcgcgcgcgtctggacgatgcgccatcgcggcaggtgccactggtgatg
ctgaccgcctatgcctccagtggcaacaccatcgaagcgatgacgctgggtgcgttcgat
catctggtcaagccggtggggcgcgccgatatcgtcgatgtggtcgagcgtgcattggcg
agccgcgcagatatcccggtcgatacgattggcgccgaacagcctgaagacgacgatgcc
ctggtcggccatagcccggcgatgcgcaccgtgcacaagcgcatcggcctggccgccgcc
tccgatctgcaggtgctgatcaccggcgaaaccggcaccggcaaggagctggctgcgcgt
gcgctgcatcgggccagtgcgcgcgcaagcgcggcgttcgtggcggtcaattgcgcggcg
attccgttggagctgatggagagcgagttgttcggccatcgcaagggcgcgttttccggg
gcgaccggcgaccgcatcggcctgattcgcgaggccgatggcggcacgctgtttctggac
gagatcggcgacatgccgctgccgatgcaggccaagttgctgcgctttctgcaggaaggt
gaagtgacgcccctgggtggccgcggcgcgcagaaggtggatgtgcgcgtgctggcggcc
acgcatcgcgatctggccgcgtgggtggcggctgggcagtttcgcagcgacctgcgttat
cgcctgaatgtggtgccgatcgaactgccgccgctgcgcgaacgcgggcaggacatcgtg
ctgcttgcgcagtattttctgcgcaacggcgaaggcgcagcgcgtgcgttatcgccggac
gcgcaagcacggctgctggtctatccgtggcccggcaacgtgcgtgagctacggaatgtc
atgcaacgcagtcagctgctggtgcgtggccacagcatcaccgccgaggatctggacgag
gcgcttggtcacagtgccgagcaacccatgacgacggcgccgctggaaggcaccttgccc
gaggcagtagcgcgtctggaaaagcagatgatccacgacgcattggcgcacagtggcggt
aaccgcgccgaagccgcgcgccggctcggcattcatcgtcagctgctgtatcgcaagctc
gatgagtatgggttgcagtag
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